| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245476
Identifier: 154245476
GI number: 154245476
Start: 1736799
End: 1737845
Strand: Direct
Name: 154245476
Synonym: Xaut_1529
Alternate gene names: NA
Gene position: 1736799-1737845 (Clockwise)
Preceding gene: 154245475
Following gene: 154245477
Centisome position: 32.71
GC content: 65.33
Gene sequence:
>1047_bases ATGCCCCATTTCTCCCCGTTCCGCCGCGCGGGACGCAGCCTGCGTGTCGTCGCCGGCTCGTTCATCGTCGCCGCCGGCCT CATGTCCGCGAGCGCGGCGTCGGCGGAAAAGCTCACCATCATCGTCGGCGGCATGGAGAAGCAGATCTACCTGCCGGCCG TGCTCACCCGCGAGCTGGGCTACTTCAAGGACGAGGGGCTCGATGTCGAGCTGATCAACACCCGTGCCGGTGTCGAGGCG GAGAACGAGCTGCTCGCCGGCGCCGTGCAGGGCGTGGTGGGCTTCTACGACCACACCATCGACCTCCAGGCCAAGGGCAA GTTCATCAAGTCCGTGGTGCAGTTCAGCCAGGCGCCGGGCGAAGTGCAGATGGTCTCCGCCAAGTTCGCGGACCAGATCA AGTCCCCCGCCGACTTCAAGGGCCACACCCTGGGCGTGACCGGCCTCGGCTCCTCCACTGATTTCCTCACCCACTATCTT GCCGCGCGGGCGGGCCTGAAGCCCGGTGACTTCTCGCTGCTGCCGGTGGGCGCGGGCAATACCTTCATCGCGGCCATGAA GCAGGACCAGATCCAGTCCGGCATGACCACGGAACCCACCATCGGTCAGTTGGTGAAGACCGGCGTCGCCAAGATCCTGG TGGACATGCGCACCCCCGAGAAGACCGTGGCGGCCCTCGGCGGACCTTATCCCGCCGCGTCCTTCTACGTGCAGTCGTCG TGGCTCGACAGCCATGCCGATGATGCGCAGAAGCTCGCCAACGCCTTCGTGCGCACCATGCGCTTCATCGCCAGCCACAG CGCTGCTGAGATCGCCGAGAAGATGCCCAAGGATTATCTCGTCGGCGACAAGGACCTCTACATCCAGGGCCTCGCCGAGG GCAAAGCCCAGTTCACGCCGGACGGCCGCATGCCGGCCGATGGCCCGGAGACGGTACTGAAGGTGCTGGCCGCCTTCTCG AAGAACGTCCAGGGCAAGCAGATCGACCTGTCGAAGACCTACACGACCGTCTTCGTCGATAACGCCGCCAAGACGCTGGG TAACTGA
Upstream 100 bases:
>100_bases CACCCGTCGCCAACGGGTGCCGCAAGACCAAGAGAATGCCGCAAGGCATCGCCATTTGAGGAAACGCGCGCGCAAAGCGC CCTTCAGGGAAGACCGACCC
Downstream 100 bases:
>100_bases CCCTCGGCAATTGAGCCTTCGCATTTGACGGCGGGCGCCTGACATTCGGCGCCGGCCGTCCCGAACCACAAACCAGAACC CGCAAGACCAAGGTCGCCGC
Product: putative ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPHFSPFRRAGRSLRVVAGSFIVAAGLMSASAASAEKLTIIVGGMEKQIYLPAVLTRELGYFKDEGLDVELINTRAGVEA ENELLAGAVQGVVGFYDHTIDLQAKGKFIKSVVQFSQAPGEVQMVSAKFADQIKSPADFKGHTLGVTGLGSSTDFLTHYL AARAGLKPGDFSLLPVGAGNTFIAAMKQDQIQSGMTTEPTIGQLVKTGVAKILVDMRTPEKTVAALGGPYPAASFYVQSS WLDSHADDAQKLANAFVRTMRFIASHSAAEIAEKMPKDYLVGDKDLYIQGLAEGKAQFTPDGRMPADGPETVLKVLAAFS KNVQGKQIDLSKTYTTVFVDNAAKTLGN
Sequences:
>Translated_348_residues MPHFSPFRRAGRSLRVVAGSFIVAAGLMSASAASAEKLTIIVGGMEKQIYLPAVLTRELGYFKDEGLDVELINTRAGVEA ENELLAGAVQGVVGFYDHTIDLQAKGKFIKSVVQFSQAPGEVQMVSAKFADQIKSPADFKGHTLGVTGLGSSTDFLTHYL AARAGLKPGDFSLLPVGAGNTFIAAMKQDQIQSGMTTEPTIGQLVKTGVAKILVDMRTPEKTVAALGGPYPAASFYVQSS WLDSHADDAQKLANAFVRTMRFIASHSAAEIAEKMPKDYLVGDKDLYIQGLAEGKAQFTPDGRMPADGPETVLKVLAAFS KNVQGKQIDLSKTYTTVFVDNAAKTLGN >Mature_347_residues PHFSPFRRAGRSLRVVAGSFIVAAGLMSASAASAEKLTIIVGGMEKQIYLPAVLTRELGYFKDEGLDVELINTRAGVEAE NELLAGAVQGVVGFYDHTIDLQAKGKFIKSVVQFSQAPGEVQMVSAKFADQIKSPADFKGHTLGVTGLGSSTDFLTHYLA ARAGLKPGDFSLLPVGAGNTFIAAMKQDQIQSGMTTEPTIGQLVKTGVAKILVDMRTPEKTVAALGGPYPAASFYVQSSW LDSHADDAQKLANAFVRTMRFIASHSAAEIAEKMPKDYLVGDKDLYIQGLAEGKAQFTPDGRMPADGPETVLKVLAAFSK NVQGKQIDLSKTYTTVFVDNAAKTLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37055; Mature: 36924
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFSPFRRAGRSLRVVAGSFIVAAGLMSASAASAEKLTIIVGGMEKQIYLPAVLTRELG CCCCCHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEHHHHHHHHHC YFKDEGLDVELINTRAGVEAENELLAGAVQGVVGFYDHTIDLQAKGKFIKSVVQFSQAPG CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCC EVQMVSAKFADQIKSPADFKGHTLGVTGLGSSTDFLTHYLAARAGLKPGDFSLLPVGAGN CEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC TFIAAMKQDQIQSGMTTEPTIGQLVKTGVAKILVDMRTPEKTVAALGGPYPAASFYVQSS CEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHEEEHH WLDSHADDAQKLANAFVRTMRFIASHSAAEIAEKMPKDYLVGDKDLYIQGLAEGKAQFTP HCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCEECC DGRMPADGPETVLKVLAAFSKNVQGKQIDLSKTYTTVFVDNAAKTLGN CCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHHCC >Mature Secondary Structure PHFSPFRRAGRSLRVVAGSFIVAAGLMSASAASAEKLTIIVGGMEKQIYLPAVLTRELG CCCCHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEHHHHHHHHHC YFKDEGLDVELINTRAGVEAENELLAGAVQGVVGFYDHTIDLQAKGKFIKSVVQFSQAPG CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCC EVQMVSAKFADQIKSPADFKGHTLGVTGLGSSTDFLTHYLAARAGLKPGDFSLLPVGAGN CEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC TFIAAMKQDQIQSGMTTEPTIGQLVKTGVAKILVDMRTPEKTVAALGGPYPAASFYVQSS CEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHEEEHH WLDSHADDAQKLANAFVRTMRFIASHSAAEIAEKMPKDYLVGDKDLYIQGLAEGKAQFTP HCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCEECC DGRMPADGPETVLKVLAAFSKNVQGKQIDLSKTYTTVFVDNAAKTLGN CCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA