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The map label for this gene is ccdA [H]

Identifier: 154245472

GI number: 154245472

Start: 1733723

End: 1734448

Strand: Reverse

Name: ccdA [H]

Synonym: Xaut_1525

Alternate gene names: 154245472

Gene position: 1734448-1733723 (Counterclockwise)

Preceding gene: 154245479

Following gene: 154245471

Centisome position: 32.67

GC content: 69.83

Gene sequence:

>726_bases
ATGTCGCTGGATATCGGCCTGCCCGGCGCCTTCCTGGCCGGGCTCCTGTCGTTCGCCTCGCCCTGCGTGCTGCCGCTGGT
GCCTGCCTATCTCGGCTTCCTGACCGGGACGGTCGCGGGTCACGAAGGCGAGGCCGCGCCGCGCCGGCGGGTGATCGCGG
CGTCGGTTCTCTTCGTTCTCGGCTTCTCCACCGTCTTTATCCTGCTGGGTGCCACCGCCTCCACCCTCGGGCAGATTCTG
ATGCGCCATGTGGAGGCGCTCACCCTCGTCTCCGGCGCCCTGCTGGTGCTGTTCGGCCTGCACATGACCGGCCTGGTGCG
CATTCCCCTGCTTTACCGGCAAGCGAAGATCGATGCTGCCGCCACGCCTGCGGGCCTCGTCGGCCCCTATCTCATCGGTC
TTGCCTTCGGCTTCGGCTGGTCGCCCTGCGTCGGGCCGGTGCTCGCCGCCATCCTGATGGTGGCGGGAGCCGAGGCGTCG
GTGGGCAAAGGCATGGCGCTGCTCGCGGTCTATGCCGCCGGCATCGGCATCCCGTTCCTGCTCGCGGCCGCTTTCACCGG
CCCCTTCCTCGCCTGGGCGGCTTCGGCGCGGCGGCGTCTGGGCCTCATCGAGAAGGTGGCCGGCGCGCTCCTCATCCTCA
CCGGCCTCGCCTTCATGACCGGCTTCATGCCTGAGGTCGCCCAATGGCTCATGGACCAGGTGCCGGCCCTCGGCACCATC
GGCTGA

Upstream 100 bases:

>100_bases
CTCCGGAAGCGCGATTTCACTTCTCATATTATCGCATTCGCATATATCTTGAGCAAGACCTGAAACCGCGTCGGCTCAAC
GCATGCGGAAGGGGAGGATC

Downstream 100 bases:

>100_bases
CGCACCCCCCCGGAGGGACCCTGATGTCGGATGCATCCCACCTCACCCGCCGCGGCTTCCTGCGCGGCGCCGCGAGCCTC
TCCGGCACCATTGCGGCGAC

Product: cytochrome c biogenesis protein transmembrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSLDIGLPGAFLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVLGFSTVFILLGATASTLGQIL
MRHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKIDAAATPAGLVGPYLIGLAFGFGWSPCVGPVLAAILMVAGAEAS
VGKGMALLAVYAAGIGIPFLLAAAFTGPFLAWAASARRRLGLIEKVAGALLILTGLAFMTGFMPEVAQWLMDQVPALGTI
G

Sequences:

>Translated_241_residues
MSLDIGLPGAFLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVLGFSTVFILLGATASTLGQIL
MRHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKIDAAATPAGLVGPYLIGLAFGFGWSPCVGPVLAAILMVAGAEAS
VGKGMALLAVYAAGIGIPFLLAAAFTGPFLAWAASARRRLGLIEKVAGALLILTGLAFMTGFMPEVAQWLMDQVPALGTI
G
>Mature_240_residues
SLDIGLPGAFLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVLGFSTVFILLGATASTLGQILM
RHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKIDAAATPAGLVGPYLIGLAFGFGWSPCVGPVLAAILMVAGAEASV
GKGMALLAVYAAGIGIPFLLAAAFTGPFLAWAASARRRLGLIEKVAGALLILTGLAFMTGFMPEVAQWLMDQVPALGTIG

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 24642; Mature: 24511

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDIGLPGAFLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVL
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GFSTVFILLGATASTLGQILMRHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKIDAA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
ATPAGLVGPYLIGLAFGFGWSPCVGPVLAAILMVAGAEASVGKGMALLAVYAAGIGIPFL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHH
LAAAFTGPFLAWAASARRRLGLIEKVAGALLILTGLAFMTGFMPEVAQWLMDQVPALGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
G
C
>Mature Secondary Structure 
SLDIGLPGAFLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVL
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GFSTVFILLGATASTLGQILMRHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKIDAA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
ATPAGLVGPYLIGLAFGFGWSPCVGPVLAAILMVAGAEASVGKGMALLAVYAAGIGIPFL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHH
LAAAFTGPFLAWAASARRRLGLIEKVAGALLILTGLAFMTGFMPEVAQWLMDQVPALGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]