| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154245450
Identifier: 154245450
GI number: 154245450
Start: 1711177
End: 1712007
Strand: Reverse
Name: 154245450
Synonym: Xaut_1503
Alternate gene names: NA
Gene position: 1712007-1711177 (Counterclockwise)
Preceding gene: 154245451
Following gene: 154245449
Centisome position: 32.25
GC content: 68.47
Gene sequence:
>831_bases ATGGCCAGCACAGCAAGCCTCCGTGTCGCGCCCCAGGCGGACACCTATGCCGCCTATCAGACCCCGCTCGCGGTGCGCCA GGCCTGCCGCAGCGGCGCGCTCACCGGCCCCACCGCCGGCATGGCGCCTGGTTATGTGCAGGGCAACCTCGCCGTGCTGC CCAAGGAACTGGCAGAGGAATTCCTGCGCTTCTGCCATTTCAATCCGCGCCCCTGCCCGGTCATCGGCATGTCGGAGCCC GGCAGCTTCAAGGTGCCCGTGCTGGGCGAGGACCTCGACATCCGCACCGACTTCCCCGGCTACCGGGTGTGGCAGGACGG AGAGGTGATCGCCGACACCGCCGACGTGACGGACTACTGGCGCGATGATCTGGTCGCCTTCGTCATCGGCTGCTCCCTGT CCTTCGAGGAAGCGCTGATGGCCGAGGGCCTGCCCCTGCGCCATGTGGACCGCAATGTGCGCGTGCCCATGTTCCGCACC ACTGTGCAGTGCGTGCCGGCGGGCCGCTTCTCGGGCCGCATGGTCATGTCCATGCGTCCGCTGGTGCCGGCCCACGCCAT CCGCGCCATCCAGATCACCACGCGCTTTCCCCAGGTGCACGGCGCGCCGCTGCATGTGGGCCTGCCGGAGCTGATCGGCG TCAAGGACCTGATGAAGCCCGACTATGGCGACGCGGTGGAAGTGCTCGACAACGAGCTTCCGGTGTTCTGGGCCTGCGGC GTCACCCCCCAGTCCGTGATCGCCGAGGCCAAGCCCTCCTTCGCCATCACCCACGCGCCCGGCTGCATGCTGGTCACCGA CCGGCGCAACACCGAGTTCGCGATCCTTTGA
Upstream 100 bases:
>100_bases CCATGGATCGAGCGCGCTCATTCCATGGGCACACTGCCAGGCGCGCTCCACACCCGATCAGCCCCGAATCGCCACGGCGA TCAACAGGACGAGCCTCACC
Downstream 100 bases:
>100_bases TCATTCCCGGGCGCCAACGCTCGGACTGACGCCGAAAACGGCGCAGACTGCAACAAATGCCGATCCAGACATCCTGACCT TCAGAGGGGACCACACATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEP GSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRT TVQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL
Sequences:
>Translated_276_residues MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEP GSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRT TVQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL >Mature_275_residues ASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEPG SFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTT VQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACGV TPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL
Specific function: Unknown
COG id: COG4336
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0317 family
Homologues:
Organism=Homo sapiens, GI156139135, Length=237, Percent_Identity=34.1772151898734, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI156139133, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI156139131, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI156139129, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI156139137, Length=237, Percent_Identity=32.9113924050633, Blast_Score=121, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1503_XANP2 (A7IFF8)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001416408.1 - ProteinModelPortal: A7IFF8 - SMR: A7IFF8 - STRING: A7IFF8 - GeneID: 5422217 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_1503 - eggNOG: COG4336 - HOGENOM: HBG289473 - OMA: GPMVVSM - ProtClustDB: PRK05463 - BioCyc: XAUT78245:XAUT_1503-MONOMER - HAMAP: MF_01830 - InterPro: IPR009906 - InterPro: IPR016938 - PIRSF: PIRSF029755
Pfam domain/function: PF07286 DUF1445
EC number: NA
Molecular weight: Translated: 30110; Mature: 29979
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEE CCCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEECCHHHHHH FLRFCHFNPRPCPVIGMSEPGSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYW HHHHHCCCCCCCCEEECCCCCCEECEEECCCCEEEECCCCCEEECCCCEEECCCHHHHHH RDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTTVQCVPAGRFSGRMVMSMRP HHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECC LVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG CCCHHHEEEEEEEEECCCCCCCEEEECCHHHHCHHHHHCCCCCCHHHHHCCCCCEEEECC VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL CCHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEC >Mature Secondary Structure ASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEE CCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEECCHHHHHH FLRFCHFNPRPCPVIGMSEPGSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYW HHHHHCCCCCCCCEEECCCCCCEECEEECCCCEEEECCCCCEEECCCCEEECCCHHHHHH RDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTTVQCVPAGRFSGRMVMSMRP HHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECC LVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG CCCHHHEEEEEEEEECCCCCCCEEEECCHHHHCHHHHHCCCCCCHHHHHCCCCCEEEECC VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL CCHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA