Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154245450

Identifier: 154245450

GI number: 154245450

Start: 1711177

End: 1712007

Strand: Reverse

Name: 154245450

Synonym: Xaut_1503

Alternate gene names: NA

Gene position: 1712007-1711177 (Counterclockwise)

Preceding gene: 154245451

Following gene: 154245449

Centisome position: 32.25

GC content: 68.47

Gene sequence:

>831_bases
ATGGCCAGCACAGCAAGCCTCCGTGTCGCGCCCCAGGCGGACACCTATGCCGCCTATCAGACCCCGCTCGCGGTGCGCCA
GGCCTGCCGCAGCGGCGCGCTCACCGGCCCCACCGCCGGCATGGCGCCTGGTTATGTGCAGGGCAACCTCGCCGTGCTGC
CCAAGGAACTGGCAGAGGAATTCCTGCGCTTCTGCCATTTCAATCCGCGCCCCTGCCCGGTCATCGGCATGTCGGAGCCC
GGCAGCTTCAAGGTGCCCGTGCTGGGCGAGGACCTCGACATCCGCACCGACTTCCCCGGCTACCGGGTGTGGCAGGACGG
AGAGGTGATCGCCGACACCGCCGACGTGACGGACTACTGGCGCGATGATCTGGTCGCCTTCGTCATCGGCTGCTCCCTGT
CCTTCGAGGAAGCGCTGATGGCCGAGGGCCTGCCCCTGCGCCATGTGGACCGCAATGTGCGCGTGCCCATGTTCCGCACC
ACTGTGCAGTGCGTGCCGGCGGGCCGCTTCTCGGGCCGCATGGTCATGTCCATGCGTCCGCTGGTGCCGGCCCACGCCAT
CCGCGCCATCCAGATCACCACGCGCTTTCCCCAGGTGCACGGCGCGCCGCTGCATGTGGGCCTGCCGGAGCTGATCGGCG
TCAAGGACCTGATGAAGCCCGACTATGGCGACGCGGTGGAAGTGCTCGACAACGAGCTTCCGGTGTTCTGGGCCTGCGGC
GTCACCCCCCAGTCCGTGATCGCCGAGGCCAAGCCCTCCTTCGCCATCACCCACGCGCCCGGCTGCATGCTGGTCACCGA
CCGGCGCAACACCGAGTTCGCGATCCTTTGA

Upstream 100 bases:

>100_bases
CCATGGATCGAGCGCGCTCATTCCATGGGCACACTGCCAGGCGCGCTCCACACCCGATCAGCCCCGAATCGCCACGGCGA
TCAACAGGACGAGCCTCACC

Downstream 100 bases:

>100_bases
TCATTCCCGGGCGCCAACGCTCGGACTGACGCCGAAAACGGCGCAGACTGCAACAAATGCCGATCCAGACATCCTGACCT
TCAGAGGGGACCACACATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEP
GSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRT
TVQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG
VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL

Sequences:

>Translated_276_residues
MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEP
GSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRT
TVQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG
VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL
>Mature_275_residues
ASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEEFLRFCHFNPRPCPVIGMSEPG
SFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYWRDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTT
VQCVPAGRFSGRMVMSMRPLVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACGV
TPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=237, Percent_Identity=34.1772151898734, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI156139133, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI156139131, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI156139129, Length=237, Percent_Identity=34.1772151898734, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI156139137, Length=237, Percent_Identity=32.9113924050633, Blast_Score=121, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1503_XANP2 (A7IFF8)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001416408.1
- ProteinModelPortal:   A7IFF8
- SMR:   A7IFF8
- STRING:   A7IFF8
- GeneID:   5422217
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_1503
- eggNOG:   COG4336
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   XAUT78245:XAUT_1503-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 30110; Mature: 29979

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEE
CCCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEECCHHHHHH
FLRFCHFNPRPCPVIGMSEPGSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYW
HHHHHCCCCCCCCEEECCCCCCEECEEECCCCEEEECCCCCEEECCCCEEECCCHHHHHH
RDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTTVQCVPAGRFSGRMVMSMRP
HHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECC
LVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG
CCCHHHEEEEEEEEECCCCCCCEEEECCHHHHCHHHHHCCCCCCHHHHHCCCCCEEEECC
VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL
CCHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEC
>Mature Secondary Structure 
ASTASLRVAPQADTYAAYQTPLAVRQACRSGALTGPTAGMAPGYVQGNLAVLPKELAEE
CCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEECCHHHHHH
FLRFCHFNPRPCPVIGMSEPGSFKVPVLGEDLDIRTDFPGYRVWQDGEVIADTADVTDYW
HHHHHCCCCCCCCEEECCCCCCEECEEECCCCEEEECCCCCEEECCCCEEECCCHHHHHH
RDDLVAFVIGCSLSFEEALMAEGLPLRHVDRNVRVPMFRTTVQCVPAGRFSGRMVMSMRP
HHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECC
LVPAHAIRAIQITTRFPQVHGAPLHVGLPELIGVKDLMKPDYGDAVEVLDNELPVFWACG
CCCHHHEEEEEEEEECCCCCCCEEEECCHHHHCHHHHHCCCCCCHHHHHCCCCCEEEECC
VTPQSVIAEAKPSFAITHAPGCMLVTDRRNTEFAIL
CCHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA