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The map label for this gene is holA

Identifier: 154245395

GI number: 154245395

Start: 1661727

End: 1662755

Strand: Direct

Name: holA

Synonym: Xaut_1448

Alternate gene names: NA

Gene position: 1661727-1662755 (Clockwise)

Preceding gene: 154245394

Following gene: 154245399

Centisome position: 31.3

GC content: 72.5

Gene sequence:

>1029_bases
GTGGTCGCGGTGCGGCCCGGCGACGCCGAGACGGCGCTCGCCCGGCGCGACCCGGGCAAGAGTGTCGTCCTCATCTTCGG
CCCCGATACCGGCCTCGTGCATGAGCGGGCCCAGGGCCTGGTGCGTCGCGCCGTGCCCGATGCGCATGATCCGTTCGCCC
TGGTGCGCCTCGAAGGCGACGACATCTCCTCCGACCCCCGCCGGCTGATCGACGAGACCTCCACCATCGGCCTGTTCGGC
GGCGAGCGGGTGGTGTGGGTGCGCGCCGGCAGCCGCAACATCGTCCCGGCGCTTCAGCCCGTGCTCGCCGGCCGCTGCGA
TGCGCTGGTGGTGGTGGAGGCCGGCGACCTCAAGAAGGGTGCCCCCTTGCGCGCCCTTTGCGAGAACGCCCCCAACGCCC
TCGCCATCGCCTGCTATGCCGACAGCGACCGCGATCTTTCCCGCCTCGTGGATGCCATGATGGCCGAGGCGGGCCTCACC
ATCGACCGGGATGCGCGGGACCTCCTGGTCTCCCTCATCGGCGGCGATCGCCTGGCGTCGCGCGGGGAGATCGCCAAGCT
CATCCTCTACGCCCAGGGGCAGCAGCGGGTGAGCCTTGAGGATGTACGGACCATCGTGGGCGATGCCTCGGCGCTGGCCC
TCGATGATGTGGTGGATTCGGCGCTGGCCGGGGAGACGCGGGAGGCGCTGGCCGCCCTCGCCAAGGCCATGGGCGCGGCG
ACCCGGCCCGATGCGGTGCTGGGTAGCCTGTTGCGCGCGCTCACCGCCCTGCATCCCATGACGCTCGCCGTCGCCGGCGG
GGCGAGCCCCGACCAGGTGGTGGGATCGGCCCGCCCGCCGGTGCATTTCTCGCGCAAGGCGAAGATGGAGAAAGCCTTGC
GGGCGCTGGATCCGGACCGTTGCCTGAAGGCGCTTCTGGCGGTGGATGACGCCGTGCTCGCCGCCCGCCGGAACGCCCCG
CTGGCGCCTGCCATCTGCGAGCGGGTGGTGCTTCAGGTGGCCCAGCAGGCGGGGCGGGGACGGCGGTAA

Upstream 100 bases:

>100_bases
CGAGAAGCGCGCCGCGCGCAGCGTCGCGGACCAGATCAAGGCCCAGCTTGGCGCCTTCTTCATCCGCAATCCCAGCGTCC
CCGGCTCGGCGAGCTGAGCC

Downstream 100 bases:

>100_bases
AAGAAAGCCGTCAGCCGGCTTCGTCGGGCTTCAGGGCGCGGAAGTGGCCTTTCACCTGCAACCAGCCGAGGGCGGCGAGG
CCCGGCAGGCCCGCCACCGC

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit; DNA Polymerase III Delta; DNA Polymerase II

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVAVRPGDAETALARRDPGKSVVLIFGPDTGLVHERAQGLVRRAVPDAHDPFALVRLEGDDISSDPRRLIDETSTIGLFG
GERVVWVRAGSRNIVPALQPVLAGRCDALVVVEAGDLKKGAPLRALCENAPNALAIACYADSDRDLSRLVDAMMAEAGLT
IDRDARDLLVSLIGGDRLASRGEIAKLILYAQGQQRVSLEDVRTIVGDASALALDDVVDSALAGETREALAALAKAMGAA
TRPDAVLGSLLRALTALHPMTLAVAGGASPDQVVGSARPPVHFSRKAKMEKALRALDPDRCLKALLAVDDAVLAARRNAP
LAPAICERVVLQVAQQAGRGRR

Sequences:

>Translated_342_residues
MVAVRPGDAETALARRDPGKSVVLIFGPDTGLVHERAQGLVRRAVPDAHDPFALVRLEGDDISSDPRRLIDETSTIGLFG
GERVVWVRAGSRNIVPALQPVLAGRCDALVVVEAGDLKKGAPLRALCENAPNALAIACYADSDRDLSRLVDAMMAEAGLT
IDRDARDLLVSLIGGDRLASRGEIAKLILYAQGQQRVSLEDVRTIVGDASALALDDVVDSALAGETREALAALAKAMGAA
TRPDAVLGSLLRALTALHPMTLAVAGGASPDQVVGSARPPVHFSRKAKMEKALRALDPDRCLKALLAVDDAVLAARRNAP
LAPAICERVVLQVAQQAGRGRR
>Mature_342_residues
MVAVRPGDAETALARRDPGKSVVLIFGPDTGLVHERAQGLVRRAVPDAHDPFALVRLEGDDISSDPRRLIDETSTIGLFG
GERVVWVRAGSRNIVPALQPVLAGRCDALVVVEAGDLKKGAPLRALCENAPNALAIACYADSDRDLSRLVDAMMAEAGLT
IDRDARDLLVSLIGGDRLASRGEIAKLILYAQGQQRVSLEDVRTIVGDASALALDDVVDSALAGETREALAALAKAMGAA
TRPDAVLGSLLRALTALHPMTLAVAGGASPDQVVGSARPPVHFSRKAKMEKALRALDPDRCLKALLAVDDAVLAARRNAP
LAPAICERVVLQVAQQAGRGRR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 35956; Mature: 35956

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVRPGDAETALARRDPGKSVVLIFGPDTGLVHERAQGLVRRAVPDAHDPFALVRLEGD
CEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC
DISSDPRRLIDETSTIGLFGGERVVWVRAGSRNIVPALQPVLAGRCDALVVVEAGDLKKG
CCCCCHHHHHHCCCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
APLRALCENAPNALAIACYADSDRDLSRLVDAMMAEAGLTIDRDARDLLVSLIGGDRLAS
CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHCC
RGEIAKLILYAQGQQRVSLEDVRTIVGDASALALDDVVDSALAGETREALAALAKAMGAA
CCHHEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
TRPDAVLGSLLRALTALHPMTLAVAGGASPDQVVGSARPPVHFSRKAKMEKALRALDPDR
CCCHHHHHHHHHHHHHHCHHHEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHH
CLKALLAVDDAVLAARRNAPLAPAICERVVLQVAQQAGRGRR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVAVRPGDAETALARRDPGKSVVLIFGPDTGLVHERAQGLVRRAVPDAHDPFALVRLEGD
CEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC
DISSDPRRLIDETSTIGLFGGERVVWVRAGSRNIVPALQPVLAGRCDALVVVEAGDLKKG
CCCCCHHHHHHCCCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
APLRALCENAPNALAIACYADSDRDLSRLVDAMMAEAGLTIDRDARDLLVSLIGGDRLAS
CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHCC
RGEIAKLILYAQGQQRVSLEDVRTIVGDASALALDDVVDSALAGETREALAALAKAMGAA
CCHHEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
TRPDAVLGSLLRALTALHPMTLAVAGGASPDQVVGSARPPVHFSRKAKMEKALRALDPDR
CCCHHHHHHHHHHHHHHCHHHEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHH
CLKALLAVDDAVLAARRNAPLAPAICERVVLQVAQQAGRGRR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA