| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245392
Identifier: 154245392
GI number: 154245392
Start: 1656680
End: 1658146
Strand: Reverse
Name: 154245392
Synonym: Xaut_1445
Alternate gene names: NA
Gene position: 1658146-1656680 (Counterclockwise)
Preceding gene: 154245396
Following gene: 154245390
Centisome position: 31.23
GC content: 65.78
Gene sequence:
>1467_bases ATGGCAGCGCGGCGTCGCGGAATGAAGTTCGGTCTCAGGTCCGCGGCCGCCTTTGCCCTGCCCTTCCTCGCCCTCCTGCT GACGGCCGCCTCGCCCGCCGCCGCGGCGGAGGGCTTGCCGGTGCTGGACGGGGCGCGACTGTCCCCGCTGTGGGCCATCC CGTTCGCCGGCATGCTGCTGTCCATCGCGCTGCTGCCGCTGCTGGCAAACCACTTCTGGCATCACCACTACGGCAAGGTG GCCCTGTTCTGGGGCCTCGCCTTCGTGGTGCCGTTCGCCACCGTCTACGGCCCATCGGCCACCGGGCACGAGGTGGTGCA CACCGCGCTGCTGGAATACATCCCCTTCATCATCCTGCTGTTCGCCCTGTTCACGGTCTCCGGCGGCGTGCTGGTGACCG GGAACATCAAGGGCTCGCCGGCGGTGAACACCCTCATCCTCGGCATCGGCACCCTGATCGCGAGCCTTATCGGCACCACC GGCGCGTCCATGGTGCTGATCCGCCCGCTGCTGCGCGCCAATGACGAGCGGCGGCACAATGTGCACACGGTGGTGTTCTT CATCTTCCTGGTGTCCAACATCGGCGGCTCGCTGACGCCGCTGGGCGACCCGCCGTTGTTCCTGGGCTTCCTGAAGGGCG TGAACTTCTTCTGGACCACCACCCACCTTTTGCACGACACGGCGGTGATCGCGGCGATCCTGCTCGTCGCCTACTACCTG CTCGACCGCTATTTCTACGCCAAGGAAGACCCCGCGCTGAAGCGGACCGACCCGACCCCGCCGACCGAAAAGATCGGGCT GCGCGGGGCGCAGAACCTGCCCCTGCTGGTGGGCATCATCGGCGCCATCCTGCTTAGCGCCCTGTGGAAGCCCGGCGTCA CCTTCGACATCTATGGCACCCATGTGGAACTGCAGTGGATCGTGCGCGACGTGCTGCTGGTGGCTCTCGCCTTGGTCTCC CTCGCCATAACCCCCACCATCGTGCGCGAGCGCAACGGCTTCGACTGGGAGCCCATCATGGAAGTGGCGAAGCTGTTCGC CGCCATCTTCCTTACTATCATACCGGTCATCGCCATTTTGAAGGCCGGCTCGCGGGGGGCCTTCTCGCCGCTGGTGGACC TGGTGACCGGAGCGGACGGGCAGCCGGTGAACGTCTGGTACTTCTGGCTCACCGGTTCGCTCTCAGCGTTCCTCGACAAT GCGCCCACCTATCTCGTCTTCTTCAATCTCGCCGGCGGCGACCCGCACCAGCTCATGGGGCCGCTGGCGGTGACGCTGGA GGCGATCTCGGCGGGCGCGGTGTTCATGGGCGCCATGACTTATATCGGCAACGCGCCGAACTTCATGGTGCTCTCCATCG CGCGCCACCGCGGCGTGAAGATGCCGAGCTTCTTCGGCTATATTGGCTGGTCCATCGTCTTCCTGGTGCCGTGCTTCGCG CTGCTGACGTGGCTGTACTACATCTGA
Upstream 100 bases:
>100_bases CTGAGTTCCACCCTGCCGAAGCTCCGCCTTGCCAAGCTCCACCTTGCCACCGGCGCGCGCTTCGTCCATCAAACCCCGGT AGGTAATCTGGAGGGTGACG
Downstream 100 bases:
>100_bases GGCGCGGGGCCGGCGGCGACCCTGCCGGCCACCTCAGCGCGTGATCACGATCGTGGTGTTGCCCGGTCCGTAGCTCTGCA CCAGGGAATAGAGCGTGGCC
Product: citrate transporter
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MAARRRGMKFGLRSAAAFALPFLALLLTAASPAAAAEGLPVLDGARLSPLWAIPFAGMLLSIALLPLLANHFWHHHYGKV ALFWGLAFVVPFATVYGPSATGHEVVHTALLEYIPFIILLFALFTVSGGVLVTGNIKGSPAVNTLILGIGTLIASLIGTT GASMVLIRPLLRANDERRHNVHTVVFFIFLVSNIGGSLTPLGDPPLFLGFLKGVNFFWTTTHLLHDTAVIAAILLVAYYL LDRYFYAKEDPALKRTDPTPPTEKIGLRGAQNLPLLVGIIGAILLSALWKPGVTFDIYGTHVELQWIVRDVLLVALALVS LAITPTIVRERNGFDWEPIMEVAKLFAAIFLTIIPVIAILKAGSRGAFSPLVDLVTGADGQPVNVWYFWLTGSLSAFLDN APTYLVFFNLAGGDPHQLMGPLAVTLEAISAGAVFMGAMTYIGNAPNFMVLSIARHRGVKMPSFFGYIGWSIVFLVPCFA LLTWLYYI
Sequences:
>Translated_488_residues MAARRRGMKFGLRSAAAFALPFLALLLTAASPAAAAEGLPVLDGARLSPLWAIPFAGMLLSIALLPLLANHFWHHHYGKV ALFWGLAFVVPFATVYGPSATGHEVVHTALLEYIPFIILLFALFTVSGGVLVTGNIKGSPAVNTLILGIGTLIASLIGTT GASMVLIRPLLRANDERRHNVHTVVFFIFLVSNIGGSLTPLGDPPLFLGFLKGVNFFWTTTHLLHDTAVIAAILLVAYYL LDRYFYAKEDPALKRTDPTPPTEKIGLRGAQNLPLLVGIIGAILLSALWKPGVTFDIYGTHVELQWIVRDVLLVALALVS LAITPTIVRERNGFDWEPIMEVAKLFAAIFLTIIPVIAILKAGSRGAFSPLVDLVTGADGQPVNVWYFWLTGSLSAFLDN APTYLVFFNLAGGDPHQLMGPLAVTLEAISAGAVFMGAMTYIGNAPNFMVLSIARHRGVKMPSFFGYIGWSIVFLVPCFA LLTWLYYI >Mature_487_residues AARRRGMKFGLRSAAAFALPFLALLLTAASPAAAAEGLPVLDGARLSPLWAIPFAGMLLSIALLPLLANHFWHHHYGKVA LFWGLAFVVPFATVYGPSATGHEVVHTALLEYIPFIILLFALFTVSGGVLVTGNIKGSPAVNTLILGIGTLIASLIGTTG ASMVLIRPLLRANDERRHNVHTVVFFIFLVSNIGGSLTPLGDPPLFLGFLKGVNFFWTTTHLLHDTAVIAAILLVAYYLL DRYFYAKEDPALKRTDPTPPTEKIGLRGAQNLPLLVGIIGAILLSALWKPGVTFDIYGTHVELQWIVRDVLLVALALVSL AITPTIVRERNGFDWEPIMEVAKLFAAIFLTIIPVIAILKAGSRGAFSPLVDLVTGADGQPVNVWYFWLTGSLSAFLDNA PTYLVFFNLAGGDPHQLMGPLAVTLEAISAGAVFMGAMTYIGNAPNFMVLSIARHRGVKMPSFFGYIGWSIVFLVPCFAL LTWLYYI
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52777; Mature: 52646
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRRGMKFGLRSAAAFALPFLALLLTAASPAAAAEGLPVLDGARLSPLWAIPFAGMLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH SIALLPLLANHFWHHHYGKVALFWGLAFVVPFATVYGPSATGHEVVHTALLEYIPFIILL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FALFTVSGGVLVTGNIKGSPAVNTLILGIGTLIASLIGTTGASMVLIRPLLRANDERRHN HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH VHTVVFFIFLVSNIGGSLTPLGDPPLFLGFLKGVNFFWTTTHLLHDTAVIAAILLVAYYL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDRYFYAKEDPALKRTDPTPPTEKIGLRGAQNLPLLVGIIGAILLSALWKPGVTFDIYGT HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC HVELQWIVRDVLLVALALVSLAITPTIVRERNGFDWEPIMEVAKLFAAIFLTIIPVIAIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAGSRGAFSPLVDLVTGADGQPVNVWYFWLTGSLSAFLDNAPTYLVFFNLAGGDPHQLMG HCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCEEEEEEEECCCCHHHHHH PLAVTLEAISAGAVFMGAMTYIGNAPNFMVLSIARHRGVKMPSFFGYIGWSIVFLVPCFA HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHH LLTWLYYI HHHHHHHC >Mature Secondary Structure AARRRGMKFGLRSAAAFALPFLALLLTAASPAAAAEGLPVLDGARLSPLWAIPFAGMLL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH SIALLPLLANHFWHHHYGKVALFWGLAFVVPFATVYGPSATGHEVVHTALLEYIPFIILL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FALFTVSGGVLVTGNIKGSPAVNTLILGIGTLIASLIGTTGASMVLIRPLLRANDERRHN HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH VHTVVFFIFLVSNIGGSLTPLGDPPLFLGFLKGVNFFWTTTHLLHDTAVIAAILLVAYYL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDRYFYAKEDPALKRTDPTPPTEKIGLRGAQNLPLLVGIIGAILLSALWKPGVTFDIYGT HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC HVELQWIVRDVLLVALALVSLAITPTIVRERNGFDWEPIMEVAKLFAAIFLTIIPVIAIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAGSRGAFSPLVDLVTGADGQPVNVWYFWLTGSLSAFLDNAPTYLVFFNLAGGDPHQLMG HCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCEEEEEEEECCCCHHHHHH PLAVTLEAISAGAVFMGAMTYIGNAPNFMVLSIARHRGVKMPSFFGYIGWSIVFLVPCFA HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHH LLTWLYYI HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA