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The map label for this gene is ydcO [H]

Identifier: 154245387

GI number: 154245387

Start: 1652344

End: 1653489

Strand: Reverse

Name: ydcO [H]

Synonym: Xaut_1440

Alternate gene names: 154245387

Gene position: 1653489-1652344 (Counterclockwise)

Preceding gene: 154245388

Following gene: 154245379

Centisome position: 31.15

GC content: 73.04

Gene sequence:

>1146_bases
GTGCGCGTCTCCGTCATCGTTTCCGCCTTCGTCGCGGCGCTCGTGGGATTCGGCGGAACCCTCGCCATCGTCCTCGCCGC
CGCCGCCGCGGTGGGAGCGAGCCCCGCCGAAGCCTCCTCGTGGGTGGCCGCTATCTGCCTCGCCATCGCTGCGACCTCCG
CCTTTCTCTCCATCCGCTACCGCATGCCCATCATCGCCGCGTGGTCCACGCCGGGGGCGGCGCTCATCGCCGGCTTCGGA
TCGGGAATCGGCATGGCCTCGGCCACCGGCGCCTTCCTGGTCGCCGGCCTGCTGGTGGTGCTGTGCGCGGCGATCAAGCC
CCTCGGCACGCTGGTCGGGCGCATTCCGGTAGCGGTGGCAGCCGCCATGCTGGCCGGCGTGCTGGTCCGGTTCGTCATGG
CCCTCGCCGAGCATGCGGCGGCATCGCCGGCCCTGGTGCTGCCGGTGATCGCAGTTTTCTTCATCGTGCGGGTTCTGTCG
CCCAACTGGGCGGTGCCGGCGGCGCTGGTGGTGGGCGGAGCGGGGGCCGTCCTGCTGGGTCGGGTGGGACCCATGCCGGA
GTTCGAGCTCTCGGCCCTGGTGTGGACCACACCGCGCTTCGAGCCCCCGGTTCTGGTGGGGCTGGGCCTGCCCCTGTTCC
TCGTCACCATGGCGTCGCAGAACCTGCCCGGCTTCGCGGTGCTGCGCGCATGCGGCTATGTGCCTCCGGTGCGGCCTATC
CTCGCCGTCACCGGCCTTGCCTCCATGGCGAGCGCGCCCTTCGGTGCCCACGCCACCAATCTTGCCGCCATCGCCGCCGC
TTTGTGCACCGGGCCGGAGACTCACCCCGATCCCAGGCGGCGCTGGCTGGCTGGGCCGGTCTATGCCGGCTTCTACCTGC
TGCTGGCGGCCGCCGGCGCCTCACTGGTGGGGGTGTTCGCGGCCCTGCCGCCCGCCCTCATCGCCACCATCGCCGGCCTC
GCCCTGCTCTCAGCGCTAACCGGCGCGCTGACGGCAGCGCTGAACGAGGACAGGCACCGGGTGGCGGCGGTGGCCACCTT
CGCCACCACCGCCTCGGGGGTCACGGCCCTCGGCCTCGGGGCGCCGGTGTGGGGGCTGGCGGCGGGGCTTCTCATCGTCG
GCCTCGACCGGCTGCGGCGGAACTGA

Upstream 100 bases:

>100_bases
CATCCTCGCCCCGGTGCTGGCGGCGCAGGCGCCCTGATCAGGCGGCCTTCCCTCCCCCTTCCCGCTCCCGCCCAGACCCA
TTCAGCCAAGGACAGGCCCC

Downstream 100 bases:

>100_bases
AGCGCCGTGCCTGAAGCGGCCCACTGAAACGAAAATCCCGCGGGCGACACCGGTCAGCCGCGGGATTTGAGGTGCGTCTC
AGGCCTTCTCAGCCGGCCTG

Product: benzoate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRVSVIVSAFVAALVGFGGTLAIVLAAAAAVGASPAEASSWVAAICLAIAATSAFLSIRYRMPIIAAWSTPGAALIAGFG
SGIGMASATGAFLVAGLLVVLCAAIKPLGTLVGRIPVAVAAAMLAGVLVRFVMALAEHAAASPALVLPVIAVFFIVRVLS
PNWAVPAALVVGGAGAVLLGRVGPMPEFELSALVWTTPRFEPPVLVGLGLPLFLVTMASQNLPGFAVLRACGYVPPVRPI
LAVTGLASMASAPFGAHATNLAAIAAALCTGPETHPDPRRRWLAGPVYAGFYLLLAAAGASLVGVFAALPPALIATIAGL
ALLSALTGALTAALNEDRHRVAAVATFATTASGVTALGLGAPVWGLAAGLLIVGLDRLRRN

Sequences:

>Translated_381_residues
MRVSVIVSAFVAALVGFGGTLAIVLAAAAAVGASPAEASSWVAAICLAIAATSAFLSIRYRMPIIAAWSTPGAALIAGFG
SGIGMASATGAFLVAGLLVVLCAAIKPLGTLVGRIPVAVAAAMLAGVLVRFVMALAEHAAASPALVLPVIAVFFIVRVLS
PNWAVPAALVVGGAGAVLLGRVGPMPEFELSALVWTTPRFEPPVLVGLGLPLFLVTMASQNLPGFAVLRACGYVPPVRPI
LAVTGLASMASAPFGAHATNLAAIAAALCTGPETHPDPRRRWLAGPVYAGFYLLLAAAGASLVGVFAALPPALIATIAGL
ALLSALTGALTAALNEDRHRVAAVATFATTASGVTALGLGAPVWGLAAGLLIVGLDRLRRN
>Mature_381_residues
MRVSVIVSAFVAALVGFGGTLAIVLAAAAAVGASPAEASSWVAAICLAIAATSAFLSIRYRMPIIAAWSTPGAALIAGFG
SGIGMASATGAFLVAGLLVVLCAAIKPLGTLVGRIPVAVAAAMLAGVLVRFVMALAEHAAASPALVLPVIAVFFIVRVLS
PNWAVPAALVVGGAGAVLLGRVGPMPEFELSALVWTTPRFEPPVLVGLGLPLFLVTMASQNLPGFAVLRACGYVPPVRPI
LAVTGLASMASAPFGAHATNLAAIAAALCTGPETHPDPRRRWLAGPVYAGFYLLLAAAGASLVGVFAALPPALIATIAGL
ALLSALTGALTAALNEDRHRVAAVATFATTASGVTALGLGAPVWGLAAGLLIVGLDRLRRN

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=365, Percent_Identity=40.5479452054795, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 37930; Mature: 37930

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSVIVSAFVAALVGFGGTLAIVLAAAAAVGASPAEASSWVAAICLAIAATSAFLSIRY
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RMPIIAAWSTPGAALIAGFGSGIGMASATGAFLVAGLLVVLCAAIKPLGTLVGRIPVAVA
CCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMLAGVLVRFVMALAEHAAASPALVLPVIAVFFIVRVLSPNWAVPAALVVGGAGAVLLG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHC
RVGPMPEFELSALVWTTPRFEPPVLVGLGLPLFLVTMASQNLPGFAVLRACGYVPPVRPI
CCCCCCCCHHHEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
LAVTGLASMASAPFGAHATNLAAIAAALCTGPETHPDPRRRWLAGPVYAGFYLLLAAAGA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH
SLVGVFAALPPALIATIAGLALLSALTGALTAALNEDRHRVAAVATFATTASGVTALGLG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
APVWGLAAGLLIVGLDRLRRN
CCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVSVIVSAFVAALVGFGGTLAIVLAAAAAVGASPAEASSWVAAICLAIAATSAFLSIRY
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RMPIIAAWSTPGAALIAGFGSGIGMASATGAFLVAGLLVVLCAAIKPLGTLVGRIPVAVA
CCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMLAGVLVRFVMALAEHAAASPALVLPVIAVFFIVRVLSPNWAVPAALVVGGAGAVLLG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHC
RVGPMPEFELSALVWTTPRFEPPVLVGLGLPLFLVTMASQNLPGFAVLRACGYVPPVRPI
CCCCCCCCHHHEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
LAVTGLASMASAPFGAHATNLAAIAAALCTGPETHPDPRRRWLAGPVYAGFYLLLAAAGA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH
SLVGVFAALPPALIATIAGLALLSALTGALTAALNEDRHRVAAVATFATTASGVTALGLG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
APVWGLAAGLLIVGLDRLRRN
CCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]