| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is braE [H]
Identifier: 154245386
GI number: 154245386
Start: 1651249
End: 1652241
Strand: Direct
Name: braE [H]
Synonym: Xaut_1439
Alternate gene names: 154245386
Gene position: 1651249-1652241 (Clockwise)
Preceding gene: 154245385
Following gene: 154245391
Centisome position: 31.1
GC content: 66.06
Gene sequence:
>993_bases ATGAGCACCTCCACCCCCGCCCATCCCGCCGGTGCGCCCGCGGCCTCCGGCTCCGGCGCCAGCGCCGGCACCATCTTCGG CATCCTCGCCATCGCGGTGCTGCTGGCGGCGCCGTTCGGCGTCTACCCCGTGTTCCTCATGAAGGTGATGTGCTTCGCGT TGTTCGCGTGCGCCTTCAACCTGCTTCTGGGCTACACGGGCCTGCTCTCGTTCGGCCACGCCATGTTCTTCGGCGGGTCG GCCTATGTGTGCGCCCACACCATCAAGGTGATGGGCTTCACCCCGGAGCTGGGCATCCTTGCCGGCGTCGTCTTCGCCGC CATGCTGGGTTTCATCTCCGGCCTGCTCGCCATCCGCCGCCAGGGCATCTATTTCGCCATGGTGACGCTGGCGCTGGCGC AGATGTTCTTCTTCTTCTGCCTCCAGGCCCGCTTCACCGGCGGCGAGGACGGCCTTCAGGCGGTGCCGCGCGGGGCGCTG TTCGGCCTCATCGACCTGTCGAAGGATATCAACCTCTACTACCTGGTGCTGGCCATCTTCGTGTTCGGCTTCCTGGTCAT CTACCGGGCGATCCACTCGCCGTTCGGTCAGGTGCTGAAGGCCATCCGCGAGAACGAGCCGCGCGCTATCTCTCTGGGCT ACCGGGTGAACCAGTACAAGCTGCTCGCCTTCGTGCTGTCGGCGGCGCTGGCCGGCCTTGCGGGAGCGACCAAGGTGCTG GTGTTCCAGCTCGCCTCGCTCACAGACGTGGCCTGGCAGATGTCGGGCGAGGTGATCCTGATGACGCTGGTGGGCGGCAT GGGCACCATCCTCGGCCCCATCGTTGGCGCGGCGGTGATCGTGACCATGCAGAACTACCTCGCCGGCCTCGGCGAATGGG TGCTGGTGATCCAGGGCGTCATCTTCGTCCTCGCCGTCTCCCTGTTCCGCAGAGGCTTCGTCGGCGAGGTCATCGCCATC ATCCAGCAGTTCAAGGCCAAGAAGGCAGGCTGA
Upstream 100 bases:
>100_bases TACCCGGAGGCCTCCTCCACGGTGATTTTCGTCATCATGGCCATCGTGCTCATGGTGAAGCCCGCCGGCCTGTTCGGCAC AGCCAAGTGAGCGCGGCGCA
Downstream 100 bases:
>100_bases GACAGGCCGGCTGAGAAGGCCTGAGACGCACCTCAAATCCCGCGGCTGACCGGTGTCGCCCGCGGGATTTTCGTTTCAGT GGGCCGCTTCAGGCACGGCG
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSTSTPAHPAGAPAASGSGASAGTIFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFGHAMFFGGS AYVCAHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRRQGIYFAMVTLALAQMFFFFCLQARFTGGEDGLQAVPRGAL FGLIDLSKDINLYYLVLAIFVFGFLVIYRAIHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVL VFQLASLTDVAWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFRRGFVGEVIAI IQQFKAKKAG
Sequences:
>Translated_330_residues MSTSTPAHPAGAPAASGSGASAGTIFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFGHAMFFGGS AYVCAHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRRQGIYFAMVTLALAQMFFFFCLQARFTGGEDGLQAVPRGAL FGLIDLSKDINLYYLVLAIFVFGFLVIYRAIHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVL VFQLASLTDVAWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFRRGFVGEVIAI IQQFKAKKAG >Mature_329_residues STSTPAHPAGAPAASGSGASAGTIFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFGHAMFFGGSA YVCAHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRRQGIYFAMVTLALAQMFFFFCLQARFTGGEDGLQAVPRGALF GLIDLSKDINLYYLVLAIFVFGFLVIYRAIHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVLV FQLASLTDVAWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFRRGFVGEVIAII QQFKAKKAG
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=281, Percent_Identity=28.8256227758007, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 34868; Mature: 34737
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTPAHPAGAPAASGSGASAGTIFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LLLGYTGLLSFGHAMFFGGSAYVCAHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QGIYFAMVTLALAQMFFFFCLQARFTGGEDGLQAVPRGALFGLIDLSKDINLYYLVLAIF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH VFGFLVIYRAIHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVL HHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VFQLASLTDVAWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGV HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVLAVSLFRRGFVGEVIAIIQQFKAKKAG HHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STSTPAHPAGAPAASGSGASAGTIFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFN CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LLLGYTGLLSFGHAMFFGGSAYVCAHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QGIYFAMVTLALAQMFFFFCLQARFTGGEDGLQAVPRGALFGLIDLSKDINLYYLVLAIF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH VFGFLVIYRAIHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVL HHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VFQLASLTDVAWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGV HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVLAVSLFRRGFVGEVIAIIQQFKAKKAG HHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]