| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yxiO [H]
Identifier: 154245376
GI number: 154245376
Start: 1637017
End: 1638417
Strand: Reverse
Name: yxiO [H]
Synonym: Xaut_1429
Alternate gene names: 154245376
Gene position: 1638417-1637017 (Counterclockwise)
Preceding gene: 154245377
Following gene: 154245375
Centisome position: 30.86
GC content: 70.24
Gene sequence:
>1401_bases ATGCCTGACACCTCCCCTTCCCCGCCTGTTCCTGCGCTTCCAGTCCCGCGCCGGGCCATCTTCGGCTGGATCCTGTTCGA TCCCGCCTGCCAGCCCTATTTCACACTCATCACCACGTTCATCTTCGCCCCCTATTTCGCATCGGCCGTGGCGGCGACGC CGGTCGAGGGACAGGCGCTGTGGGGGTTCGCCACCGGCGCGGCGGGGCTCGTCATCGCCGTGTGTTCTCCGGTGCTCGGG GCGGTGGCCGATGCGGCGGGGCGGCGCAAGCCGTGGATCTTCGCCTTCGGGCTGATGATGATGGCGGGCGCGGCGGCACT GTGGTTCGCCGAGCCGGGGAACACGGCACGCATCCCCCTCGTGCTCGCCGCCTTCGCCATCGGCACAATCGGGGTGGAGT TCGCCACCGTCTTCAACAATGCCATCATGCCCGCCCTGGTGCCCAAGGAACGGCTGGGACGGCTGTCGGGCGCCGGCTGG GCGGCGGGCTATTTCGGCGGGCTGGTGGCGCTGGCGCTGATGCTCGGCTTCTTCGCCACCCAGCCCGACACCGGCCTGAC CCTCCTCGGCCGCCCGCCGGCCTTCGGGCTCGATGCGGCGGCACGGGAGGGCGACCGCTTCAGCGGGCCGCTGACGGCGC TGTGGTATGCCGTGCTGGTCATTCCCATGTTCCTGTTCGTGCCCGATGCGCCCCGCGCCATGCCCATGGGCGAGGCCATC CGCACCGGGCTCGGCGAGATCCGCCGCCTGATCCCGCGCCTGAAGGAGCGCCCGGTGCTGGCGCGCTTCCTCCTCGCCAA CATGGTCTATACGGATGCGTTGGTGGCGCTGTTCGCCTTCGGTGGCATCTATGCGGCGGGCACCTTCGGCTGGGGCTCCA TCGAGATCGGCATCTTCGGCATCCTTCTCACTCTCACCGGCACCGCCGGCGCGCTGGCCGGCGGCTGGATCGACGACGCA CTGGGGCCGCGCACGGTGATCCTGGGCGCGCTGCTGGTGCTGCTCATTGCCTGCGTCGGCCTGCTCTCGCTGGATCGCGG CGCGGTCCTCTTTGGCCTGGTACCCACCGCGCCGGGCAGCGGGCTCTTCGGCTCGGTGCCGGAGAAGATCTATCTGGGAC TGGGCCTGCTTATCGGCGCAGTGGCCGGGCCGTTGCAGGCGGCAAGCCGCACCCTGCTGGTTCGGCTTGCGCCGGCCGAA AACATGGCGGAATGCTTCGGCCTGTTCGCCCTTTCGGGCAAGATCACCTCGTTCGCCGCCCCCACCTGCGTGGCGCTGGT GACGGCGGCCACCGGCAGCCAGAAGGCGGGGGTGGCCGTGCTCGTCGCCTTCTTCGTCCTCGGCGCCGTGCTGGTGCGCG GGCGGACGGGGGCACATGATGCCGATGCGACACAGGATTAG
Upstream 100 bases:
>100_bases GGAGTGAGCGCCACCGGCACGACGGCCTGACGCGACGCCGCTCTTGCGCGGCGGAGCGTCCTGTGCGCCCTTGGCCGGAC CTGACCCGTCCGGATCCGGC
Downstream 100 bases:
>100_bases GGAGGCCGCAATGACCGTCCGCTCCATCCGCTTCGATCCCAGGCCCGCCGTGGAGGCGGCCTCCAGCACCACTGTGCATG AGTGGTACCAGGACCGCACC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MPDTSPSPPVPALPVPRRAIFGWILFDPACQPYFTLITTFIFAPYFASAVAATPVEGQALWGFATGAAGLVIAVCSPVLG AVADAAGRRKPWIFAFGLMMMAGAAALWFAEPGNTARIPLVLAAFAIGTIGVEFATVFNNAIMPALVPKERLGRLSGAGW AAGYFGGLVALALMLGFFATQPDTGLTLLGRPPAFGLDAAAREGDRFSGPLTALWYAVLVIPMFLFVPDAPRAMPMGEAI RTGLGEIRRLIPRLKERPVLARFLLANMVYTDALVALFAFGGIYAAGTFGWGSIEIGIFGILLTLTGTAGALAGGWIDDA LGPRTVILGALLVLLIACVGLLSLDRGAVLFGLVPTAPGSGLFGSVPEKIYLGLGLLIGAVAGPLQAASRTLLVRLAPAE NMAECFGLFALSGKITSFAAPTCVALVTAATGSQKAGVAVLVAFFVLGAVLVRGRTGAHDADATQD
Sequences:
>Translated_466_residues MPDTSPSPPVPALPVPRRAIFGWILFDPACQPYFTLITTFIFAPYFASAVAATPVEGQALWGFATGAAGLVIAVCSPVLG AVADAAGRRKPWIFAFGLMMMAGAAALWFAEPGNTARIPLVLAAFAIGTIGVEFATVFNNAIMPALVPKERLGRLSGAGW AAGYFGGLVALALMLGFFATQPDTGLTLLGRPPAFGLDAAAREGDRFSGPLTALWYAVLVIPMFLFVPDAPRAMPMGEAI RTGLGEIRRLIPRLKERPVLARFLLANMVYTDALVALFAFGGIYAAGTFGWGSIEIGIFGILLTLTGTAGALAGGWIDDA LGPRTVILGALLVLLIACVGLLSLDRGAVLFGLVPTAPGSGLFGSVPEKIYLGLGLLIGAVAGPLQAASRTLLVRLAPAE NMAECFGLFALSGKITSFAAPTCVALVTAATGSQKAGVAVLVAFFVLGAVLVRGRTGAHDADATQD >Mature_465_residues PDTSPSPPVPALPVPRRAIFGWILFDPACQPYFTLITTFIFAPYFASAVAATPVEGQALWGFATGAAGLVIAVCSPVLGA VADAAGRRKPWIFAFGLMMMAGAAALWFAEPGNTARIPLVLAAFAIGTIGVEFATVFNNAIMPALVPKERLGRLSGAGWA AGYFGGLVALALMLGFFATQPDTGLTLLGRPPAFGLDAAAREGDRFSGPLTALWYAVLVIPMFLFVPDAPRAMPMGEAIR TGLGEIRRLIPRLKERPVLARFLLANMVYTDALVALFAFGGIYAAGTFGWGSIEIGIFGILLTLTGTAGALAGGWIDDAL GPRTVILGALLVLLIACVGLLSLDRGAVLFGLVPTAPGSGLFGSVPEKIYLGLGLLIGAVAGPLQAASRTLLVRLAPAEN MAECFGLFALSGKITSFAAPTCVALVTAATGSQKAGVAVLVAFFVLGAVLVRGRTGAHDADATQD
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48035; Mature: 47904
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTSPSPPVPALPVPRRAIFGWILFDPACQPYFTLITTFIFAPYFASAVAATPVEGQAL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE WGFATGAAGLVIAVCSPVLGAVADAAGRRKPWIFAFGLMMMAGAAALWFAEPGNTARIPL EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHEEEECCCCCCHHHH VLAAFAIGTIGVEFATVFNNAIMPALVPKERLGRLSGAGWAAGYFGGLVALALMLGFFAT HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC QPDTGLTLLGRPPAFGLDAAAREGDRFSGPLTALWYAVLVIPMFLFVPDAPRAMPMGEAI CCCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH RTGLGEIRRLIPRLKERPVLARFLLANMVYTDALVALFAFGGIYAAGTFGWGSIEIGIFG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH ILLTLTGTAGALAGGWIDDALGPRTVILGALLVLLIACVGLLSLDRGAVLFGLVPTAPGS HHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GLFGSVPEKIYLGLGLLIGAVAGPLQAASRTLLVRLAPAENMAECFGLFALSGKITSFAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHCC PTCVALVTAATGSQKAGVAVLVAFFVLGAVLVRGRTGAHDADATQD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PDTSPSPPVPALPVPRRAIFGWILFDPACQPYFTLITTFIFAPYFASAVAATPVEGQAL CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE WGFATGAAGLVIAVCSPVLGAVADAAGRRKPWIFAFGLMMMAGAAALWFAEPGNTARIPL EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHEEEECCCCCCHHHH VLAAFAIGTIGVEFATVFNNAIMPALVPKERLGRLSGAGWAAGYFGGLVALALMLGFFAT HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC QPDTGLTLLGRPPAFGLDAAAREGDRFSGPLTALWYAVLVIPMFLFVPDAPRAMPMGEAI CCCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH RTGLGEIRRLIPRLKERPVLARFLLANMVYTDALVALFAFGGIYAAGTFGWGSIEIGIFG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH ILLTLTGTAGALAGGWIDDALGPRTVILGALLVLLIACVGLLSLDRGAVLFGLVPTAPGS HHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GLFGSVPEKIYLGLGLLIGAVAGPLQAASRTLLVRLAPAENMAECFGLFALSGKITSFAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHCC PTCVALVTAATGSQKAGVAVLVAFFVLGAVLVRGRTGAHDADATQD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]