| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154245326
Identifier: 154245326
GI number: 154245326
Start: 1580864
End: 1583626
Strand: Direct
Name: 154245326
Synonym: Xaut_1379
Alternate gene names: NA
Gene position: 1580864-1583626 (Clockwise)
Preceding gene: 154245324
Following gene: 154245329
Centisome position: 29.78
GC content: 72.96
Gene sequence:
>2763_bases ATGGACGAATGGGCACTTCTCATTCTTGTGGTTCTCGCCTTTCCGGTGATGACGCTGGTCGCCTTCGTGCTCGTGCTCAA GCACCGGGGCCGCATCCGGGTGCTGGAGGCGCGGGTCGCCGCGCTGGAAGCGCAGGCCTTCGGCATCGTTCCTGCCGTGC CTCCCGCCGCCGCCCCGATTCCCTCAGGCCCGGTCACGCTGGCGCCCTTCGCGCCCCGGCCGCCTGAACCGGCCACCGCG CCGCCAGAGCCCGCCCGCCCGCCGGCCCTGCATGACGTGACGCGTCCACCGCCGCTCTCGGCGCCATCGCAGCCCGAGGA CGCCGCGCCGCCGCTTCCGCCGCGGCCGGGCTTCGATGCCGGCCAGCTCAAGGAACGCTTCGCCGGATTCGAGGAGAAGG TGGGCGCGCGCTGGGCGGTGTGGGTGGGCGGCCTCGCCCTGGCTCTGGGCGGAGTGTTCCTGGTGCGCTTCGCCGTGGAG CAGGACCTCATCGGCCCGGGCATGCGGGTGGGGCTGGGGCTGCTGCTGGCGGTCGCGCTGCTCGCGGGGGGAGAAGTGCT GCGCCGCCGTGCCCGCAGGGAAGAGCCGGCCGAGCCGCTTTCGGCGCCGGCTGCCGGCCCCTTTGCCGGCCTTGGGCGGG TGCCGGACGTGCCGAGCATCCTCACCGCCGCCGGCACCATGACCGCCTTCGGCAGCATCTATGCGGCCTATGAGCTGTAC CACCTCATTCCGCCGCAGGCCGCCTTCCTGCTGCTGGCGGCCACCGGCGTCGCCACCCTGCTCGCCGCCTTGCTGCATGG TCCGGCTCTTGCGGCGCTGGGCTTCATCGGCGCGGCGGTGACGCCCTTCCTCATCACCTCGAAGGATCCCAATGCCTGGG GCGTCGCCCTGCTGATCGCGGCGGTGGCGGCGAGCGCGCTCGCCGTGGCGCGGGTGCGGCGCTGGGCGTGGCTGGCCCTG ATCGCCATCATCGGCGTGGTGGCGTGGGGTCTCACCTTGGTGGTGTTCGACGTGCCGCAGGCCGTGAGCGCCTCGGGCGC GCTGGGGCTGGTGCTGCTGGCGCTGACCGCCCTGTTGCTGGCACCGGGCCTGTTCTGGGGTCCCGATACCGGCCCGCGGC CGGAGCCGATCTCCATCCTCGGTGCCGTGGGCGCTCTGGTCATCACCGCCGCGGCGGCGGTGGACGGGCTGGTGGGCGGC ATGCCGCTCTCGGTCTTCGTGCTCGCCGCCGTGGGCGTGCTGGCGCTGGCGTGGCGGGTGAAACCCATGACCTTGGCCGC GCTTGCGGTTGCGGTGCTGGCTCCCGCGATCCTCACCCGATGGGTGTTTCCGCCGCTGCCGGGCACCGCCATGGCCCCCG CCGGGCCCATGGCCGGCGCGCTGCCGGAGCCGGCGCGGCTCTCGATCGGCCACTTCATGGTCTACGCCTTCGGCATGGGC GCGCTGATGCTGGGGGCGGGGCTTGCCGGCGCGTGGCGCGGCGGGCGATTCCTGGTCCTGGTCGGCTGGGCGGTCACGGG CACCCTCGGCCCGGTGCTGATGCTGATCGCCGCCTATGCGCGCCTCACTGAGCTCGACCGCAGCGTGCCGTTCGCGGCGC TGGCGCTGGCCCTCGCCTTCCTCTTCACGCTCGCCGCCGAGCGGCTGTCGCGGAGCGTGCGCGCCTATGGCGGCACCATC TTCGCCGCCGGGGCGGTGGTGACGCTCGCGCTCGCGCTCACCTTCGCGCTGGAGAAGGGCTGGCTCACGGTGGGCCTCGC GCTGGCGGCGCTGGGCGTGGCGTGGATCTCCACCCTGCGGCCGCTGCCGGGGCTGCGCGCCTTCTCCGCCACCCTCGCGC TGGTGGTGCTGGGTCGCATCGTGTGGCTGCCCACCATCGCCGTGGACCCCGGAGCCACCCCGATTTTCAACTGGCTGCTG TGGGGCTACGGCGTGCCGGCCTTCGCCTTCGCCGGCGCCGCCTTCCTGCTGGCGAAGAGCGGCGACGACTGGAGCCGCCG GGTGCATGAGAGCCTGGCGCTGCTGTTCGCGGTGATGCTGGCGGCAACCGAGGTGCGCCACCTCGCCCATGGCGGCGACA TCTATGCCAGCGGTACCCGCCTGTTCGAGACCGGGCTGCTCGCCTGCATCTACGGGGCCTATGCGGTGGGCCTGTCGCGC CTTGCCACCATCACCGGGCGCGGCTTCTACCGGCTGTTCTCGGACCTCGTCGCGGCGATCGCGGTGCTGTGCGCCCTCAA CGGCCTCGGGGAGAACAATCCGTTCGCCACCGGGGAGAGCGTCGGCGGGGTGCTGTTCAACGACCTGCTGGTCGCCTTCG CGCTGCCGGCGGGGCTGGCGCTGGTGTTCGCCGGGGTGCAGCCGGTGGCGCGCGCCAAGGTGAAGCTGGCGGCGGGCGGG CTCGCCATCGTGCTGGCGCTGGCCTACATCACCTTCGAGGTGAGCCGCCTGTTCCAGGGCGACGTGCTTGATCCCGACCA GATCAGCTCGGCCGAGTGGTACGCCTATTCGGCGGCGTGGCTGGTTTCGGGCATGGTGCTGCTGGGCATCGGCCTGTGGC GCGGATCGCGCACCCTGCGCCTCGCCTCGGCGGCGGTGATGGTGGCGACCGTGCTGAAGGTGTTCCTCTCCGACATGGCG GATCTGGAGGGCGTGCTGCGCGCGGTCTCCTTCATCGGCCTCGGACTGGTTCTGGTGGCCATGGGCTGGGTCTACCAGCG CCTGCTCGCCCGCGAGAAGGCCGCGCCACGCGGGCCTGATTGA
Upstream 100 bases:
>100_bases GCCGGGCGCTGCGCTACACCCCGATGCCGGTGGGGAAATGCGAGCGTTTCCCACGCGGAGTCGGCCGAAGGCCGGCGTGG CAGCAGACGGGTGCATGGCG
Downstream 100 bases:
>100_bases GATCAGCCCCGCGGGCCGAAGACGATGACCGCCGCCCCGGCGAGGCACAGAGCCGCGCCGGTGGCGTCCCAACGGTCGGG GCGCACGCCTTCCACCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: MSF Permease
Number of amino acids: Translated: 920; Mature: 920
Protein sequence:
>920_residues MDEWALLILVVLAFPVMTLVAFVLVLKHRGRIRVLEARVAALEAQAFGIVPAVPPAAAPIPSGPVTLAPFAPRPPEPATA PPEPARPPALHDVTRPPPLSAPSQPEDAAPPLPPRPGFDAGQLKERFAGFEEKVGARWAVWVGGLALALGGVFLVRFAVE QDLIGPGMRVGLGLLLAVALLAGGEVLRRRARREEPAEPLSAPAAGPFAGLGRVPDVPSILTAAGTMTAFGSIYAAYELY HLIPPQAAFLLLAATGVATLLAALLHGPALAALGFIGAAVTPFLITSKDPNAWGVALLIAAVAASALAVARVRRWAWLAL IAIIGVVAWGLTLVVFDVPQAVSASGALGLVLLALTALLLAPGLFWGPDTGPRPEPISILGAVGALVITAAAAVDGLVGG MPLSVFVLAAVGVLALAWRVKPMTLAALAVAVLAPAILTRWVFPPLPGTAMAPAGPMAGALPEPARLSIGHFMVYAFGMG ALMLGAGLAGAWRGGRFLVLVGWAVTGTLGPVLMLIAAYARLTELDRSVPFAALALALAFLFTLAAERLSRSVRAYGGTI FAAGAVVTLALALTFALEKGWLTVGLALAALGVAWISTLRPLPGLRAFSATLALVVLGRIVWLPTIAVDPGATPIFNWLL WGYGVPAFAFAGAAFLLAKSGDDWSRRVHESLALLFAVMLAATEVRHLAHGGDIYASGTRLFETGLLACIYGAYAVGLSR LATITGRGFYRLFSDLVAAIAVLCALNGLGENNPFATGESVGGVLFNDLLVAFALPAGLALVFAGVQPVARAKVKLAAGG LAIVLALAYITFEVSRLFQGDVLDPDQISSAEWYAYSAAWLVSGMVLLGIGLWRGSRTLRLASAAVMVATVLKVFLSDMA DLEGVLRAVSFIGLGLVLVAMGWVYQRLLAREKAAPRGPD
Sequences:
>Translated_920_residues MDEWALLILVVLAFPVMTLVAFVLVLKHRGRIRVLEARVAALEAQAFGIVPAVPPAAAPIPSGPVTLAPFAPRPPEPATA PPEPARPPALHDVTRPPPLSAPSQPEDAAPPLPPRPGFDAGQLKERFAGFEEKVGARWAVWVGGLALALGGVFLVRFAVE QDLIGPGMRVGLGLLLAVALLAGGEVLRRRARREEPAEPLSAPAAGPFAGLGRVPDVPSILTAAGTMTAFGSIYAAYELY HLIPPQAAFLLLAATGVATLLAALLHGPALAALGFIGAAVTPFLITSKDPNAWGVALLIAAVAASALAVARVRRWAWLAL IAIIGVVAWGLTLVVFDVPQAVSASGALGLVLLALTALLLAPGLFWGPDTGPRPEPISILGAVGALVITAAAAVDGLVGG MPLSVFVLAAVGVLALAWRVKPMTLAALAVAVLAPAILTRWVFPPLPGTAMAPAGPMAGALPEPARLSIGHFMVYAFGMG ALMLGAGLAGAWRGGRFLVLVGWAVTGTLGPVLMLIAAYARLTELDRSVPFAALALALAFLFTLAAERLSRSVRAYGGTI FAAGAVVTLALALTFALEKGWLTVGLALAALGVAWISTLRPLPGLRAFSATLALVVLGRIVWLPTIAVDPGATPIFNWLL WGYGVPAFAFAGAAFLLAKSGDDWSRRVHESLALLFAVMLAATEVRHLAHGGDIYASGTRLFETGLLACIYGAYAVGLSR LATITGRGFYRLFSDLVAAIAVLCALNGLGENNPFATGESVGGVLFNDLLVAFALPAGLALVFAGVQPVARAKVKLAAGG LAIVLALAYITFEVSRLFQGDVLDPDQISSAEWYAYSAAWLVSGMVLLGIGLWRGSRTLRLASAAVMVATVLKVFLSDMA DLEGVLRAVSFIGLGLVLVAMGWVYQRLLAREKAAPRGPD >Mature_920_residues MDEWALLILVVLAFPVMTLVAFVLVLKHRGRIRVLEARVAALEAQAFGIVPAVPPAAAPIPSGPVTLAPFAPRPPEPATA PPEPARPPALHDVTRPPPLSAPSQPEDAAPPLPPRPGFDAGQLKERFAGFEEKVGARWAVWVGGLALALGGVFLVRFAVE QDLIGPGMRVGLGLLLAVALLAGGEVLRRRARREEPAEPLSAPAAGPFAGLGRVPDVPSILTAAGTMTAFGSIYAAYELY HLIPPQAAFLLLAATGVATLLAALLHGPALAALGFIGAAVTPFLITSKDPNAWGVALLIAAVAASALAVARVRRWAWLAL IAIIGVVAWGLTLVVFDVPQAVSASGALGLVLLALTALLLAPGLFWGPDTGPRPEPISILGAVGALVITAAAAVDGLVGG MPLSVFVLAAVGVLALAWRVKPMTLAALAVAVLAPAILTRWVFPPLPGTAMAPAGPMAGALPEPARLSIGHFMVYAFGMG ALMLGAGLAGAWRGGRFLVLVGWAVTGTLGPVLMLIAAYARLTELDRSVPFAALALALAFLFTLAAERLSRSVRAYGGTI FAAGAVVTLALALTFALEKGWLTVGLALAALGVAWISTLRPLPGLRAFSATLALVVLGRIVWLPTIAVDPGATPIFNWLL WGYGVPAFAFAGAAFLLAKSGDDWSRRVHESLALLFAVMLAATEVRHLAHGGDIYASGTRLFETGLLACIYGAYAVGLSR LATITGRGFYRLFSDLVAAIAVLCALNGLGENNPFATGESVGGVLFNDLLVAFALPAGLALVFAGVQPVARAKVKLAAGG LAIVLALAYITFEVSRLFQGDVLDPDQISSAEWYAYSAAWLVSGMVLLGIGLWRGSRTLRLASAAVMVATVLKVFLSDMA DLEGVLRAVSFIGLGLVLVAMGWVYQRLLAREKAAPRGPD
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95110; Mature: 95110
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEWALLILVVLAFPVMTLVAFVLVLKHRGRIRVLEARVAALEAQAFGIVPAVPPAAAPI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC PSGPVTLAPFAPRPPEPATAPPEPARPPALHDVTRPPPLSAPSQPEDAAPPLPPRPGFDA CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH GQLKERFAGFEEKVGARWAVWVGGLALALGGVFLVRFAVEQDLIGPGMRVGLGLLLAVAL HHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAGGEVLRRRARREEPAEPLSAPAAGPFAGLGRVPDVPSILTAAGTMTAFGSIYAAYELY HHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLIPPQAAFLLLAATGVATLLAALLHGPALAALGFIGAAVTPFLITSKDPNAWGVALLIA HHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH AVAASALAVARVRRWAWLALIAIIGVVAWGLTLVVFDVPQAVSASGALGLVLLALTALLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH APGLFWGPDTGPRPEPISILGAVGALVITAAAAVDGLVGGMPLSVFVLAAVGVLALAWRV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC KPMTLAALAVAVLAPAILTRWVFPPLPGTAMAPAGPMAGALPEPARLSIGHFMVYAFGMG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALMLGAGLAGAWRGGRFLVLVGWAVTGTLGPVLMLIAAYARLTELDRSVPFAALALALAF HHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTLAAERLSRSVRAYGGTIFAAGAVVTLALALTFALEKGWLTVGLALAALGVAWISTLR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PLPGLRAFSATLALVVLGRIVWLPTIAVDPGATPIFNWLLWGYGVPAFAFAGAAFLLAKS CCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC GDDWSRRVHESLALLFAVMLAATEVRHLAHGGDIYASGTRLFETGLLACIYGAYAVGLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH LATITGRGFYRLFSDLVAAIAVLCALNGLGENNPFATGESVGGVLFNDLLVAFALPAGLA HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVFAGVQPVARAKVKLAAGGLAIVLALAYITFEVSRLFQGDVLDPDQISSAEWYAYSAAW HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHH LVSGMVLLGIGLWRGSRTLRLASAAVMVATVLKVFLSDMADLEGVLRAVSFIGLGLVLVA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGWVYQRLLAREKAAPRGPD HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDEWALLILVVLAFPVMTLVAFVLVLKHRGRIRVLEARVAALEAQAFGIVPAVPPAAAPI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCC PSGPVTLAPFAPRPPEPATAPPEPARPPALHDVTRPPPLSAPSQPEDAAPPLPPRPGFDA CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH GQLKERFAGFEEKVGARWAVWVGGLALALGGVFLVRFAVEQDLIGPGMRVGLGLLLAVAL HHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAGGEVLRRRARREEPAEPLSAPAAGPFAGLGRVPDVPSILTAAGTMTAFGSIYAAYELY HHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLIPPQAAFLLLAATGVATLLAALLHGPALAALGFIGAAVTPFLITSKDPNAWGVALLIA HHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH AVAASALAVARVRRWAWLALIAIIGVVAWGLTLVVFDVPQAVSASGALGLVLLALTALLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH APGLFWGPDTGPRPEPISILGAVGALVITAAAAVDGLVGGMPLSVFVLAAVGVLALAWRV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC KPMTLAALAVAVLAPAILTRWVFPPLPGTAMAPAGPMAGALPEPARLSIGHFMVYAFGMG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALMLGAGLAGAWRGGRFLVLVGWAVTGTLGPVLMLIAAYARLTELDRSVPFAALALALAF HHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTLAAERLSRSVRAYGGTIFAAGAVVTLALALTFALEKGWLTVGLALAALGVAWISTLR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PLPGLRAFSATLALVVLGRIVWLPTIAVDPGATPIFNWLLWGYGVPAFAFAGAAFLLAKS CCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC GDDWSRRVHESLALLFAVMLAATEVRHLAHGGDIYASGTRLFETGLLACIYGAYAVGLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH LATITGRGFYRLFSDLVAAIAVLCALNGLGENNPFATGESVGGVLFNDLLVAFALPAGLA HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVFAGVQPVARAKVKLAAGGLAIVLALAYITFEVSRLFQGDVLDPDQISSAEWYAYSAAW HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHH LVSGMVLLGIGLWRGSRTLRLASAAVMVATVLKVFLSDMADLEGVLRAVSFIGLGLVLVA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGWVYQRLLAREKAAPRGPD HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA