| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is ytnP [H]
Identifier: 154245306
GI number: 154245306
Start: 1560872
End: 1561861
Strand: Direct
Name: ytnP [H]
Synonym: Xaut_1359
Alternate gene names: 154245306
Gene position: 1560872-1561861 (Clockwise)
Preceding gene: 154245305
Following gene: 154245307
Centisome position: 29.4
GC content: 65.35
Gene sequence:
>990_bases ATGAACGACCCGAGGATGCTGATCACACGCCGGCGCGCGCTTCTGGGCGGCGCCCTTTCCGTGGGCGCGTTGGCGCTGGG GCCGGGCCTTGCGCCCGCCTTCGCCAAGGCGCCGCTGGTGGGCCAGCCGGCGCCGTATTTCTACCGCTTCAAGTTCGGTG ACGGCGAGATCACCGTGGTGTCCGACGGCACGCTGCCGCTCGGCGATCCCCACGCCAACTTCACCGGCCTGTCCGCCCAG GAGATGGACCGGCAGCTCACGTCCAACTTCCTGCCCCTTTCCAATGCGGTGCTGGAGCAGAACATCCTGGTGCTGAACAC TGGCGAGAAGCTGATCGTGTTCGATACCGGCATGGGCACGTCCAAGCTGTTCGGCCCCACCACCGGCAAGCTGATGGCCT CCATCAAGCAGGCGGGCATCGATCCGAAGGACGTGGACGCGGTGGTGATGAGCCACGCCCACATCGACCATTGCGGCGGC TGCATGGCCGAGGACGGCACGCGCAACTTCCCCAATGCCCAGTATTATATCTCCCAGGCCGATTACGATTACTGGACCGA CGAGAAGACGGTGGGGCCGAACCTGAAGGCCTTCCTGGAGCAGGCGCGCAAGAACCTCGTTCCCAACCGCGACCGCATGG TGTTCTTCAAGGACGGGGAGGAATTCCTGCCCGGCATCCAGGCCATCTCCGCGCCGGGGCATACGGTGGGGCACACCGTC TTCATGATCAGCTCCGGCGGCAAGCAGCTGTGCTACATCGGCGACCTCGCCCACCATCCGGTGCTGCTGCTGGAACAGCC GCTCACCGAGTTCATGTACGACACCGACCCCAAGCAGTCGGCCCAGTCGCGGGTGAAGGTGCTGTCCATGCTCGCGGCCA ACCGCATTCCCCTCATCGCCTACCATTTCGCCTGGCCGGGCTTCGGCCATGTGGCGGCGCAGGGGCAGGGCTTCCGCTAT TTCCCGGCGCCCATGGTGATGGAGATGTGA
Upstream 100 bases:
>100_bases AGGGAGCGGGATCGCCTGTCGCGCATCGTCACCTGTCTTGCAGCCCGACGATGGCGCGGATCGGCCCGGCTTCCGGACCA ATGCGTCAGGGAGGACAGAC
Downstream 100 bases:
>100_bases GGCCGCTCGCGCGTGCGCTTGACCCGTTCCGCCGCGGTCGAGCACGGCGGCTGACGCTCTGAGATCGGATGGGGAGGCGG CAGCCAGTCGCTTCCCCATC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNDPRMLITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVVSDGTLPLGDPHANFTGLSAQ EMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGTSKLFGPTTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGG CMAEDGTRNFPNAQYYISQADYDYWTDEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTV FMISSGGKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIAYHFAWPGFGHVAAQGQGFRY FPAPMVMEM
Sequences:
>Translated_329_residues MNDPRMLITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVVSDGTLPLGDPHANFTGLSAQ EMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGTSKLFGPTTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGG CMAEDGTRNFPNAQYYISQADYDYWTDEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTV FMISSGGKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIAYHFAWPGFGHVAAQGQGFRY FPAPMVMEM >Mature_329_residues MNDPRMLITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVVSDGTLPLGDPHANFTGLSAQ EMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGTSKLFGPTTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGG CMAEDGTRNFPNAQYYISQADYDYWTDEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTV FMISSGGKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIAYHFAWPGFGHVAAQGQGFRY FPAPMVMEM
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 35849; Mature: 35849
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPRMLITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVV CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEE SDGTLPLGDPHANFTGLSAQEMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGT ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCC SKLFGPTTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGGCMAEDGTRNFPNAQYYISQA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEEC DYDYWTDEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCHHEECCCCCCCCEEE FMISSGGKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIA EEEECCCCEEEEECCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE YHFAWPGFGHVAAQGQGFRYFPAPMVMEM EEECCCCCCCEEECCCCEEECCCCCEECC >Mature Secondary Structure MNDPRMLITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVV CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEE SDGTLPLGDPHANFTGLSAQEMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGT ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCC SKLFGPTTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGGCMAEDGTRNFPNAQYYISQA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEEC DYDYWTDEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCHHEECCCCCCCCEEE FMISSGGKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIA EEEECCCCEEEEECCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE YHFAWPGFGHVAAQGQGFRYFPAPMVMEM EEECCCCCCCEEECCCCEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]