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The map label for this gene is glxA [H]

Identifier: 154245243

GI number: 154245243

Start: 1492180

End: 1493133

Strand: Direct

Name: glxA [H]

Synonym: Xaut_1295

Alternate gene names: 154245243

Gene position: 1492180-1493133 (Clockwise)

Preceding gene: 154245242

Following gene: 154245249

Centisome position: 28.11

GC content: 69.5

Gene sequence:

>954_bases
ATGCCGGGTATCGGTTTCGTGGTGTTCGACGGCTTCCAGATCATGGGCCTTGCCGCGCTCTCGGTGTTCGAGATGGCGAA
TGGCGTCATCGGGCGGCCGGCCTATGAGGTGCATGTGCTCTCCGAGCACGGCGGGCCGGTGCGCAATTCCCTCGGCTTCG
CCATCGAGACGGCGCCGTTCGGGGCGCAGATCCATGACACCACCATCACCATCGGCTCGCTGGTGGTGAAGCCCTCCGCG
CCCGCGCTGCTGGATTATCTACGCAGCGCCGGCACCGCCTCCCGGCGGGTGGCGGGCATCTGCACCGGGGCCTATGTGCT
GGCAGAAGCCGGGCTGCTCGACGGCCGCCGCGCCACCACCCACTGGGCCCATGCGCGCCACTTGCAGTCGCTCTATCCGC
GCGTGCGGGTGGAGGCCGACCGCATCTTCAGCGCCGACGGCAATGTGTGGACCTCCGCGGGCATGAGCGCGGGCATCGAC
CTTGCCCTCGCGCTGGTGGAGGACGATTTCGGGCAGGAGGTGGCGAAGGCCACCGCGCGCAACATGGTGGTCTATCTGCG
AAGGCCCGGCGGCCAGTCCCAGTTCTCCACTTTGCTGGAGCTGGAGCCGAAATCCGACCGCATCCGCCGCGCGCTGGTCT
ATGCCAAGGAGCACCTCACCCATCCGCTCTCGGTGGAGGAACTGGCCGAGACCGCCAACCTCAGCCCGCGCCAGTTCAGC
CGCCTGTTTCGCGAGGAGACCGGCCAGTCGCCGGCCAAGGCGGTGGAGCACCTGCGGCTGGAGACGGCGCGCATGCTGAT
GGAGGAGGGCCACCGCTCCATGGACGAGGTGGCCCGCGAGACCGGCTTTGCCGATCGCGAGCGCATGCGGCGGGCCTTCG
TACGCACCTTCGGCCAGCCGCCCCAGGTGATCCGCCGCGCCGCCGAGGCCATGCGGGGAGCCGGCCTCAACTGA

Upstream 100 bases:

>100_bases
AAGGTCGCCCCGCGCTATACTGCGACGGCGGCGGCCTGATCCCTGATCTGCCGCCGGATGGGCCGGCGGCAGCTTTCTCC
CCAACACCGATGAGGTCGAG

Downstream 100 bases:

>100_bases
GCGCCCGCGCGGCCCTTCACGCAGCGGTCGGCGCGGGGCGCCGCTCGCGCACCGCGACGATGGCTCCCGCCGCAATGATG
CAGAGCACGCCGGCGACGAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPGIGFVVFDGFQIMGLAALSVFEMANGVIGRPAYEVHVLSEHGGPVRNSLGFAIETAPFGAQIHDTTITIGSLVVKPSA
PALLDYLRSAGTASRRVAGICTGAYVLAEAGLLDGRRATTHWAHARHLQSLYPRVRVEADRIFSADGNVWTSAGMSAGID
LALALVEDDFGQEVAKATARNMVVYLRRPGGQSQFSTLLELEPKSDRIRRALVYAKEHLTHPLSVEELAETANLSPRQFS
RLFREETGQSPAKAVEHLRLETARMLMEEGHRSMDEVARETGFADRERMRRAFVRTFGQPPQVIRRAAEAMRGAGLN

Sequences:

>Translated_317_residues
MPGIGFVVFDGFQIMGLAALSVFEMANGVIGRPAYEVHVLSEHGGPVRNSLGFAIETAPFGAQIHDTTITIGSLVVKPSA
PALLDYLRSAGTASRRVAGICTGAYVLAEAGLLDGRRATTHWAHARHLQSLYPRVRVEADRIFSADGNVWTSAGMSAGID
LALALVEDDFGQEVAKATARNMVVYLRRPGGQSQFSTLLELEPKSDRIRRALVYAKEHLTHPLSVEELAETANLSPRQFS
RLFREETGQSPAKAVEHLRLETARMLMEEGHRSMDEVARETGFADRERMRRAFVRTFGQPPQVIRRAAEAMRGAGLN
>Mature_316_residues
PGIGFVVFDGFQIMGLAALSVFEMANGVIGRPAYEVHVLSEHGGPVRNSLGFAIETAPFGAQIHDTTITIGSLVVKPSAP
ALLDYLRSAGTASRRVAGICTGAYVLAEAGLLDGRRATTHWAHARHLQSLYPRVRVEADRIFSADGNVWTSAGMSAGIDL
ALALVEDDFGQEVAKATARNMVVYLRRPGGQSQFSTLLELEPKSDRIRRALVYAKEHLTHPLSVEELAETANLSPRQFSR
LFREETGQSPAKAVEHLRLETARMLMEEGHRSMDEVARETGFADRERMRRAFVRTFGQPPQVIRRAAEAMRGAGLN

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34678; Mature: 34547

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGIGFVVFDGFQIMGLAALSVFEMANGVIGRPAYEVHVLSEHGGPVRNSLGFAIETAPF
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHCCCCEEEECCC
GAQIHDTTITIGSLVVKPSAPALLDYLRSAGTASRRVAGICTGAYVLAEAGLLDGRRATT
CCEEECCEEEECCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
HWAHARHLQSLYPRVRVEADRIFSADGNVWTSAGMSAGIDLALALVEDDFGQEVAKATAR
HHHHHHHHHHHHHHHEECHHHEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NMVVYLRRPGGQSQFSTLLELEPKSDRIRRALVYAKEHLTHPLSVEELAETANLSPRQFS
CEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH
RLFREETGQSPAKAVEHLRLETARMLMEEGHRSMDEVARETGFADRERMRRAFVRTFGQP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PQVIRRAAEAMRGAGLN
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PGIGFVVFDGFQIMGLAALSVFEMANGVIGRPAYEVHVLSEHGGPVRNSLGFAIETAPF
CCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHCCCCEEEECCC
GAQIHDTTITIGSLVVKPSAPALLDYLRSAGTASRRVAGICTGAYVLAEAGLLDGRRATT
CCEEECCEEEECCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
HWAHARHLQSLYPRVRVEADRIFSADGNVWTSAGMSAGIDLALALVEDDFGQEVAKATAR
HHHHHHHHHHHHHHHEECHHHEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NMVVYLRRPGGQSQFSTLLELEPKSDRIRRALVYAKEHLTHPLSVEELAETANLSPRQFS
CEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH
RLFREETGQSPAKAVEHLRLETARMLMEEGHRSMDEVARETGFADRERMRRAFVRTFGQP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PQVIRRAAEAMRGAGLN
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]