| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 154245207
GI number: 154245207
Start: 1448584
End: 1449345
Strand: Reverse
Name: fabG [H]
Synonym: Xaut_1259
Alternate gene names: 154245207
Gene position: 1449345-1448584 (Counterclockwise)
Preceding gene: 154245208
Following gene: 154245206
Centisome position: 27.3
GC content: 70.87
Gene sequence:
>762_bases ATGAGCCCCTCCGCCAAGCCCATCCTCGTCACCGGCGGCGGGCGTGGCCTTGGCGCCGCCATCGTGCGCGCCCTGGCGGC GGCGGGCTATCCCGTGACCTTCACCTACCGTTCGGCCGTGGCGGAAGCGCAGGCGCTGATGGACGAGATCCACGCCGCGC ACCCGGACGCTGTCTTGTCTGCCCGCGCGCTGGACCTGGCCGACCGCGCCGCGGTGGAGGCCTTCGCCGAGGAGCTGGAG GCGGGGGATACGCTCTACGGCCTGTGCCACAATGCGGGCGCCTCCTACGACACCCTCGCCGCCATGATCGACCAGGACAA GGCCGAGACGGTGATGCAGGTGAACCATTTCGCCTTCGTGCGCCTTGCCCGCGCGGTGGTGCGGCCCATGACGCGGGCGA AGGCCGGGCGCATCGTCGCCATCGGCTCGGTGGCGGCGCTCCAGGCCAACCAGGGCAATGCGGCCTACGCGGCGTCCAAG GCCGCCCTGCTCGCCCATGTGCGCGGCCTTGCCATCGAGACCGCCCGGCGCGGCGTGACGGTGAACTATGTGGCCCCCGG CTTCATCGATACCGCCATGCTGGAAAAATTCGCCGACTATCGCGCGAAGATGGAGGCGCAGATCCCCGCCGGCCGCTTCG CGACGCCCGATGACGTGGCCCAGGTGGTGGCCTTTCTCTTCTCCCCCGGCGCGGGCTATATGACCGGCGCCATATTGCCG GTGGATGGCGGGCTTTCCGCCTCGCTCGCCGCCCACCGCTGA
Upstream 100 bases:
>100_bases GACGCGAAGGTGCGGCGGGTGATCTCCAACTCCTTCGGCTTCGGCGGGCAGAATGTCTGCCTCGTGCTGGCGGGGGAGCC GGCGTGAGGGGGACGGCGCG
Downstream 100 bases:
>100_bases CCCAACTTCCGAGAAAAAAAGAATGCGTGGCCTCCAGCTCGTCTCCGACCGCAGCCTCGAACTCGTCGACCTGCCCGAAC CCGACGCCCCCGGCGCCGGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSPSAKPILVTGGGRGLGAAIVRALAAAGYPVTFTYRSAVAEAQALMDEIHAAHPDAVLSARALDLADRAAVEAFAEELE AGDTLYGLCHNAGASYDTLAAMIDQDKAETVMQVNHFAFVRLARAVVRPMTRAKAGRIVAIGSVAALQANQGNAAYAASK AALLAHVRGLAIETARRGVTVNYVAPGFIDTAMLEKFADYRAKMEAQIPAGRFATPDDVAQVVAFLFSPGAGYMTGAILP VDGGLSASLAAHR
Sequences:
>Translated_253_residues MSPSAKPILVTGGGRGLGAAIVRALAAAGYPVTFTYRSAVAEAQALMDEIHAAHPDAVLSARALDLADRAAVEAFAEELE AGDTLYGLCHNAGASYDTLAAMIDQDKAETVMQVNHFAFVRLARAVVRPMTRAKAGRIVAIGSVAALQANQGNAAYAASK AALLAHVRGLAIETARRGVTVNYVAPGFIDTAMLEKFADYRAKMEAQIPAGRFATPDDVAQVVAFLFSPGAGYMTGAILP VDGGLSASLAAHR >Mature_252_residues SPSAKPILVTGGGRGLGAAIVRALAAAGYPVTFTYRSAVAEAQALMDEIHAAHPDAVLSARALDLADRAAVEAFAEELEA GDTLYGLCHNAGASYDTLAAMIDQDKAETVMQVNHFAFVRLARAVVRPMTRAKAGRIVAIGSVAALQANQGNAAYAASKA ALLAHVRGLAIETARRGVTVNYVAPGFIDTAMLEKFADYRAKMEAQIPAGRFATPDDVAQVVAFLFSPGAGYMTGAILPV DGGLSASLAAHR
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=34.0080971659919, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=30.859375, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=29.7959183673469, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI19923817, Length=249, Percent_Identity=28.5140562248996, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI66933014, Length=196, Percent_Identity=26.0204081632653, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723750, Length=141, Percent_Identity=34.7517730496454, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=32.1243523316062, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=39.9193548387097, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=35.9183673469388, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=32.6530612244898, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=27.3092369477912, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=31.496062992126, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=28.90625, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=27.0588235294118, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=30.3643724696356, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=32.1285140562249, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=26.2548262548263, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=31.2267657992565, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=32.8063241106719, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=30.241935483871, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=31.5985130111524, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.3253012048193, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=30.0380228136882, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=31.1111111111111, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=28.515625, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=29.8507462686567, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=29.9625468164794, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=30.3370786516854, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=31.1538461538462, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=27.6515151515151, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=27.2030651340996, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=29.0836653386454, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=28.6245353159851, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=28.6764705882353, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=26.2357414448669, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561402, Length=147, Percent_Identity=31.2925170068027, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508651, Length=264, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=29.296875, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=26, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=29.4820717131474, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=25.968992248062, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322227, Length=198, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=28.3505154639175, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=31.7073170731707, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=30.9803921568627, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=30.1960784313725, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=31.7269076305221, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=28.4046692607004, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=29.9595141700405, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=31.2820512820513, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=30.952380952381, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644337, Length=116, Percent_Identity=37.0689655172414, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI21356301, Length=262, Percent_Identity=28.2442748091603, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26183; Mature: 26052
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSAKPILVTGGGRGLGAAIVRALAAAGYPVTFTYRSAVAEAQALMDEIHAAHPDAVLS CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHH ARALDLADRAAVEAFAEELEAGDTLYGLCHNAGASYDTLAAMIDQDKAETVMQVNHFAFV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH RLARAVVRPMTRAKAGRIVAIGSVAALQANQGNAAYAASKAALLAHVRGLAIETARRGVT HHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE VNYVAPGFIDTAMLEKFADYRAKMEAQIPAGRFATPDDVAQVVAFLFSPGAGYMTGAILP EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEE VDGGLSASLAAHR ECCCCCCCCCCCC >Mature Secondary Structure SPSAKPILVTGGGRGLGAAIVRALAAAGYPVTFTYRSAVAEAQALMDEIHAAHPDAVLS CCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHH ARALDLADRAAVEAFAEELEAGDTLYGLCHNAGASYDTLAAMIDQDKAETVMQVNHFAFV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH RLARAVVRPMTRAKAGRIVAIGSVAALQANQGNAAYAASKAALLAHVRGLAIETARRGVT HHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE VNYVAPGFIDTAMLEKFADYRAKMEAQIPAGRFATPDDVAQVVAFLFSPGAGYMTGAILP EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEE VDGGLSASLAAHR ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]