| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245169
Identifier: 154245169
GI number: 154245169
Start: 1404623
End: 1405072
Strand: Reverse
Name: 154245169
Synonym: Xaut_1221
Alternate gene names: NA
Gene position: 1405072-1404623 (Counterclockwise)
Preceding gene: 154245170
Following gene: 154245165
Centisome position: 26.47
GC content: 72.67
Gene sequence:
>450_bases ATGACGACCGATCTGCCGCTCAGCGGACATCGCCCGTCCGAAACCAGCCCACGGGAGGCCGTGCCCATCGCCGTGGTGGG TGCGCACCTCTCCGGCATGCCGCTCAATCCGGAGCTCACGGAGGCCGGAGGCGTGCTGGTGAAGAGCTGCCGCACCGCGC CGGACTACCGGCTGTTCGTGCTGCCGGACACCACGCCCCAGAAGCCGGGCGTGGTGCGCGCGCCGGGCTTTGACGGGCCG GGACTGGAAGTGGAGGTGTGGGCGCTGGAGCCCGCCGCCTTCGGCCGCTTCGTCTCCCGCATCCCCGCGCCGCTCGGCAT CGGAAAGGTGCGGCTGGAGGACGGCAGCGAAGTGCCCGGCTTCCTGTGCGAGGCCCATGCCGTGGAGCGCGCCGAGGAGA TCACCGCGCTGGGCGGCTGGCGCGCCTATATGGCGCGGCGGCGCGGATAG
Upstream 100 bases:
>100_bases GCGGGTGCGGGAGATCCGTGCCGTCCCCGGCCGCACCGTGCGGTCCGGCGATGTGGTCTGCGTGCTCGAAGCCCTGTGAC GAAAGCTGAGAGGAAAGCTG
Downstream 100 bases:
>100_bases GCTTCCGGCCCAGTCCTTTCATCCCCCGGGCGCTGCCGGGGGATGCCCCCTCCCCTGTCGCAGGGGAGGAGGCGGCCGCA GCGGTCTTCAGGCGTCCGAT
Product: putative amidase protein
Products: NA
Alternate protein names: Amidase; Amidase Family Protein; Urea Amidolyase; Aspartyl-TRNA(Asn)/Glutamyl-TRNA Amidotransferase Subunit A; Amidase Protein; Urea Carboxylase; Urea Amidolyase Allophanate Hydrolase Subunit; Glutamyl-TRNA(Gln) Amidotransferase Subunit A
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTTDLPLSGHRPSETSPREAVPIAVVGAHLSGMPLNPELTEAGGVLVKSCRTAPDYRLFVLPDTTPQKPGVVRAPGFDGP GLEVEVWALEPAAFGRFVSRIPAPLGIGKVRLEDGSEVPGFLCEAHAVERAEEITALGGWRAYMARRRG
Sequences:
>Translated_149_residues MTTDLPLSGHRPSETSPREAVPIAVVGAHLSGMPLNPELTEAGGVLVKSCRTAPDYRLFVLPDTTPQKPGVVRAPGFDGP GLEVEVWALEPAAFGRFVSRIPAPLGIGKVRLEDGSEVPGFLCEAHAVERAEEITALGGWRAYMARRRG >Mature_148_residues TTDLPLSGHRPSETSPREAVPIAVVGAHLSGMPLNPELTEAGGVLVKSCRTAPDYRLFVLPDTTPQKPGVVRAPGFDGPG LEVEVWALEPAAFGRFVSRIPAPLGIGKVRLEDGSEVPGFLCEAHAVERAEEITALGGWRAYMARRRG
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319685, Length=130, Percent_Identity=39.2307692307692, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.5.-
Molecular weight: Translated: 15879; Mature: 15748
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDLPLSGHRPSETSPREAVPIAVVGAHLSGMPLNPELTEAGGVLVKSCRTAPDYRLFV CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHCCCCCCCEEEE LPDTTPQKPGVVRAPGFDGPGLEVEVWALEPAAFGRFVSRIPAPLGIGKVRLEDGSEVPG ECCCCCCCCCEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCEEEECCCCCCCC FLCEAHAVERAEEITALGGWRAYMARRRG HHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure TTDLPLSGHRPSETSPREAVPIAVVGAHLSGMPLNPELTEAGGVLVKSCRTAPDYRLFV CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHCCCCCCCEEEE LPDTTPQKPGVVRAPGFDGPGLEVEVWALEPAAFGRFVSRIPAPLGIGKVRLEDGSEVPG ECCCCCCCCCEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCEEEECCCCCCCC FLCEAHAVERAEEITALGGWRAYMARRRG HHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA