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The map label for this gene is erfK [H]

Identifier: 154245163

GI number: 154245163

Start: 1397195

End: 1397866

Strand: Direct

Name: erfK [H]

Synonym: Xaut_1215

Alternate gene names: 154245163

Gene position: 1397195-1397866 (Clockwise)

Preceding gene: 154245161

Following gene: 154245164

Centisome position: 26.32

GC content: 68.9

Gene sequence:

>672_bases
ATGGCCCTGAAGCCCGCCCCGGCAGATCATTCCTCGACGCCTGAACGCCTTACCCGCCGCCTGTTTGTGCTCGGCGCGCC
CCTGGCGCTGGCCGCCTGCGTGACCAATCCGCCGCCGGCGCCGCTGAACCGGTCGGCGCTGATGTATGGCCCGGTGGAGG
GCGAGCCCTTCCCGGTGGACGAGGTCGACCTGTCCGAGGTGGATCCCCGCTTCCTGCGCCAGGAAGTGCCGGCGCCGGCG
GGCTTCGCGCCCGGCACCATCCTCGTCGATATCAACGAGCGGTTCCTTTACCTCATCGGCAAGGACGGCAAGGCCATCCG
CTACGGCGTGGGCGTGGGCAAGGAGGGCTATTCCTTCAAGGGCTGGGCCACCATCAAGCGCAAGGAAAAGTGGCCGCACT
GGACCCCCACCGCCAACATGGTCCGCCTCCAGCCGGCCCGCTACGGACCCTATGCGGCCGGCCTGCCCGGCGGCGAGACC
AACCCGCTCGGCCCGCGCGCGCTTTATCTCTATGACGGCGACCGCGACACCCTGTTCCGCATTCACGGCACCATCGAGCC
GTGGAGCATCGGCCAGCAGGTGTCCTCCGGCTGCATCCGCCTGCTCAACCAGGACATCATCGACCTCTACGAGCGCGTGC
CGCTCGGCACCCGGGTCTATGTGAGGGGCTGA

Upstream 100 bases:

>100_bases
ACCTAAGCCAGATTCAATGCAACGGACACGGGGCGAAACCCGCGCCCCGGTCCGCGCGTTGATGCGTGCAGAGATTCGTT
TCGTTCCGAGTGGACAGACC

Downstream 100 bases:

>100_bases
GGGGGCTCGCCCCTTGGGCGCTCGCGTCCCGGCCCGTCCGGCACGACCTGACCGACGCGATCTGACCGGCGGAGGCCATG
GGCTGGTAAAGCTTGATCGC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MALKPAPADHSSTPERLTRRLFVLGAPLALAACVTNPPPAPLNRSALMYGPVEGEPFPVDEVDLSEVDPRFLRQEVPAPA
GFAPGTILVDINERFLYLIGKDGKAIRYGVGVGKEGYSFKGWATIKRKEKWPHWTPTANMVRLQPARYGPYAAGLPGGET
NPLGPRALYLYDGDRDTLFRIHGTIEPWSIGQQVSSGCIRLLNQDIIDLYERVPLGTRVYVRG

Sequences:

>Translated_223_residues
MALKPAPADHSSTPERLTRRLFVLGAPLALAACVTNPPPAPLNRSALMYGPVEGEPFPVDEVDLSEVDPRFLRQEVPAPA
GFAPGTILVDINERFLYLIGKDGKAIRYGVGVGKEGYSFKGWATIKRKEKWPHWTPTANMVRLQPARYGPYAAGLPGGET
NPLGPRALYLYDGDRDTLFRIHGTIEPWSIGQQVSSGCIRLLNQDIIDLYERVPLGTRVYVRG
>Mature_222_residues
ALKPAPADHSSTPERLTRRLFVLGAPLALAACVTNPPPAPLNRSALMYGPVEGEPFPVDEVDLSEVDPRFLRQEVPAPAG
FAPGTILVDINERFLYLIGKDGKAIRYGVGVGKEGYSFKGWATIKRKEKWPHWTPTANMVRLQPARYGPYAAGLPGGETN
PLGPRALYLYDGDRDTLFRIHGTIEPWSIGQQVSSGCIRLLNQDIIDLYERVPLGTRVYVRG

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=138, Percent_Identity=38.4057971014493, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1787040, Length=148, Percent_Identity=37.1621621621622, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787356, Length=142, Percent_Identity=35.9154929577465, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=37.2262773722628, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24550; Mature: 24419

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKPAPADHSSTPERLTRRLFVLGAPLALAACVTNPPPAPLNRSALMYGPVEGEPFPVD
CCCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC
EVDLSEVDPRFLRQEVPAPAGFAPGTILVDINERFLYLIGKDGKAIRYGVGVGKEGYSFK
CCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCC
GWATIKRKEKWPHWTPTANMVRLQPARYGPYAAGLPGGETNPLGPRALYLYDGDRDTLFR
CEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
IHGTIEPWSIGQQVSSGCIRLLNQDIIDLYERVPLGTRVYVRG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
ALKPAPADHSSTPERLTRRLFVLGAPLALAACVTNPPPAPLNRSALMYGPVEGEPFPVD
CCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC
EVDLSEVDPRFLRQEVPAPAGFAPGTILVDINERFLYLIGKDGKAIRYGVGVGKEGYSFK
CCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCC
GWATIKRKEKWPHWTPTANMVRLQPARYGPYAAGLPGGETNPLGPRALYLYDGDRDTLFR
CEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
IHGTIEPWSIGQQVSSGCIRLLNQDIIDLYERVPLGTRVYVRG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]