| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is znuB [C]
Identifier: 154245152
GI number: 154245152
Start: 1385046
End: 1385885
Strand: Reverse
Name: znuB [C]
Synonym: Xaut_1204
Alternate gene names: 154245152
Gene position: 1385885-1385046 (Counterclockwise)
Preceding gene: 154245153
Following gene: 154245151
Centisome position: 26.1
GC content: 66.31
Gene sequence:
>840_bases ATGGACACCCTGCTCGCCCCGTTCCAGTTCGATTTCATGCAGAGCGCACTGGTGATCTCGGCGCTGGTGGCGGTGCCCAT GGCGCTGCTGTCCTGCTTCCTGGTGCTGAAGGGCTGGTCGCTGATGGGCGATGCCGTCTCCCACGCGGTGCTGCCCGGCG TGGTGCTGGCCTATATGGCCGGCCTGCCGCTCGCCTTCGGCGCCTTCGTGGCCGGCATGGTGTGCGCGCTCGGCACCGGG TACCTGAAAGCCAACAGCCGCATCAAGGAAGACACCGTGATGGGCGTGGTCTTCTCCGGCATGTTCGGGCTGGGACTGGT GCTCTACACCAAGATCCAGTCGGACGTGCATCTCGACCACATATTGTTCGGCGACATGCTGGGCGTGACCTGGGGCGACA TCACTGAAAGCGCGCTCATCTGCGGCCTGGTGACGGTGGCGCTGCTGGCCAAATGGCGCGACCTGCTGCTGAACGCGTTC GATCCCGCGCAGGCGAAGGCGGTCGGCCTGCGCGTCGGGCTGCTGCATTACGGGCTCTTGGTGATGCTGTCGCTGACCAT CGTCGCGGCACTGAAGGCCGTGGGCATCATCCTCGCCGTGTCGCTTTTGATCGCGCCGGGGGCCATCGCGTTTCTGGTGA CACGCCGCTTCGGCGTCATGCTGGTGGTGGCGGTGCTGGTGGCGGTCGGGTGCGCGCTCTGCGGCGTCTACCTCTCCTTC TTCCTCGACTCGGCGCCGGCTCCCACCATCGTGCTGCTGATGACGGCGGTCTTCATCGCCGCCTTCGTGGGGGTGCGGGT GAAGGCGGCCGGCATCCAGAGCCAACTGCCTTCCGCTTAG
Upstream 100 bases:
>100_bases AGACCCTCATCTTCCTCACCGCCTTCGTGTTCGCACCCAAGCACGGGCTTTTGGCGGCGCGGCGGCAGGCGGCGCTGGCC TTGAGGGAGGGCGGGCTGTG
Downstream 100 bases:
>100_bases GCTTTGCGACCAACCATTCGGCATCAGCCGCTATCCCGCCCTTGACGCCCCCGCCCCCTCGGGCGTAACCCCATCCGTGG GACACCTCCCCCCAACGGGA
Product: ABC-3 protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MDTLLAPFQFDFMQSALVISALVAVPMALLSCFLVLKGWSLMGDAVSHAVLPGVVLAYMAGLPLAFGAFVAGMVCALGTG YLKANSRIKEDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGVTWGDITESALICGLVTVALLAKWRDLLLNAF DPAQAKAVGLRVGLLHYGLLVMLSLTIVAALKAVGIILAVSLLIAPGAIAFLVTRRFGVMLVVAVLVAVGCALCGVYLSF FLDSAPAPTIVLLMTAVFIAAFVGVRVKAAGIQSQLPSA
Sequences:
>Translated_279_residues MDTLLAPFQFDFMQSALVISALVAVPMALLSCFLVLKGWSLMGDAVSHAVLPGVVLAYMAGLPLAFGAFVAGMVCALGTG YLKANSRIKEDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGVTWGDITESALICGLVTVALLAKWRDLLLNAF DPAQAKAVGLRVGLLHYGLLVMLSLTIVAALKAVGIILAVSLLIAPGAIAFLVTRRFGVMLVVAVLVAVGCALCGVYLSF FLDSAPAPTIVLLMTAVFIAAFVGVRVKAAGIQSQLPSA >Mature_279_residues MDTLLAPFQFDFMQSALVISALVAVPMALLSCFLVLKGWSLMGDAVSHAVLPGVVLAYMAGLPLAFGAFVAGMVCALGTG YLKANSRIKEDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGVTWGDITESALICGLVTVALLAKWRDLLLNAF DPAQAKAVGLRVGLLHYGLLVMLSLTIVAALKAVGIILAVSLLIAPGAIAFLVTRRFGVMLVVAVLVAVGCALCGVYLSF FLDSAPAPTIVLLMTAVFIAAFVGVRVKAAGIQSQLPSA
Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron (Potential) [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=232, Percent_Identity=30.6034482758621, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 29102; Mature: 29102
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLLAPFQFDFMQSALVISALVAVPMALLSCFLVLKGWSLMGDAVSHAVLPGVVLAYMA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH GLPLAFGAFVAGMVCALGTGYLKANSRIKEDTVMGVVFSGMFGLGLVLYTKIQSDVHLDH CCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFGDMLGVTWGDITESALICGLVTVALLAKWRDLLLNAFDPAQAKAVGLRVGLLHYGLL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VMLSLTIVAALKAVGIILAVSLLIAPGAIAFLVTRRFGVMLVVAVLVAVGCALCGVYLSF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDSAPAPTIVLLMTAVFIAAFVGVRVKAAGIQSQLPSA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC >Mature Secondary Structure MDTLLAPFQFDFMQSALVISALVAVPMALLSCFLVLKGWSLMGDAVSHAVLPGVVLAYMA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH GLPLAFGAFVAGMVCALGTGYLKANSRIKEDTVMGVVFSGMFGLGLVLYTKIQSDVHLDH CCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFGDMLGVTWGDITESALICGLVTVALLAKWRDLLLNAFDPAQAKAVGLRVGLLHYGLL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VMLSLTIVAALKAVGIILAVSLLIAPGAIAFLVTRRFGVMLVVAVLVAVGCALCGVYLSF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDSAPAPTIVLLMTAVFIAAFVGVRVKAAGIQSQLPSA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]