| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is murC
Identifier: 154245140
GI number: 154245140
Start: 1371449
End: 1372861
Strand: Direct
Name: murC
Synonym: Xaut_1192
Alternate gene names: 154245140
Gene position: 1371449-1372861 (Clockwise)
Preceding gene: 154245139
Following gene: 154245144
Centisome position: 25.83
GC content: 67.02
Gene sequence:
>1413_bases ATGAAGTTGCCGTCCGGCCTCGGCTCCATCCATTTCGTCGGCATCGGCGGCATCGGCATGAGCGGCATCGCCGAAGTGCT GCACAATCTCGGCTATGAGGTGCAGGGCTCGGACGTGGCGGACAGCGCCAACGTGAAGCGCCTGCGCGACCTCGGCATCA AGGTGATGATCGGCCACTCCGCGGTCAATGTGGATGACGCCGACGTGGTGGTGGTCTCCTCCGCCATCAAGCGCGACAAT CCGGAGCTGGTGGCCGCCCGCACCAAGCGCCTGCCGGTGGTGCGCCGCGCCGAGATGCTGGCCGAACTGATGCGGCTGAA GAGCTGCGTCTCCATCGCCGGCACCCACGGCAAGACCACCACCACCTCCATGGTGGCGGCACTGCTGGACGCCGGCAATT TCGACCCCACCGTCATCAACGGCGGCATCATCAACGCCTACGGCACCAATGCCCGCCTCGGCGACGGCAACTGGATGGTG GTGGAAGCGGACGAGAGCGACGGCACCTTCCTGAAACTGCCCACGGAAGTCGCCATCGTCACCAATGTGGACCCCGAGCA CCTCGACCATTTCAAGACCTTCGACAAGGTGCAGGACGCCTTCAAGACCTTCGTGGAGAACGTGCCCTTCTACGGCTTCG CGGTGATGTGCATCGACCATCCGGTGGTGCAGGCGCTGGTGGGCCGCATCGAGGACCGGCGCGTCATCACCTATGGCGAG AACCCGCAGGCGGACGTGCGCCTCGTGGACGTGGACCTGAAGGGCGGCATCACCCGCTTCGGCGTCGTCTTCCGCAACCG CGCGGGGGAGACGGTGCACGAGATTTCCGGGCTCAAGCTGCCCATGCCGGGCAAGCACAATGCGCTCAACGCCACTGCGG CCATCGCGGTGGCCCATGAGCTGAAGGTGCCCGACGACAAGATCATCGAGGCCATCGCCAATTTCGGTGGCGTGAAGCGG CGTTTCACCCGCACCGGGGAATGGAACGGCGTCACCGTGTTCGACGACTACGGCCACCACCCGGTGGAGATCGCCGCCGT GCTGAAGGCGGCGCGGGCGGCGAGTGAGGGGCAGGTGATCGCCGTGGTGCAGCCGCACCGCTATTCGCGGCTCGCCTCCC TGTTCGACGAATTCTGCACCTGCTTCAACGATGCCGACCACGTGGTGGTGGCCCCGGTCTATGCCGCCGGCGAGACCCCC ATCGAGGGCGCGGACCGGGACCATCTGGTGCAGGGCCTCATCGCCCACGGCCACCGCTCGGTGACGGCGCTGGAGGGACC GGAACGGCTTGCCCAGGTGGTGGGTGGGCTGGCGAAGCCGGGAGACTACGTCATCTGCCTCGGCGCCGGCTCCATCAGCG GCTGGGCCTATGCCCTGCCGGGGGAACTGGCCGCGCTCAAGCCGGCGGCTTAG
Upstream 100 bases:
>100_bases CCAGAAGCCAGGGTGTGCTCGACGCAGCGGAACGACTGGGCGATCTCGTCCGGCATCTGGCGGCGAAGGGCGCGGTCGCA ACCTTTCAGGGGAAACTGGC
Downstream 100 bases:
>100_bases GGGGCGGCGGGCAGGAGGTAACCGGCGTGCAGGCAGCGGGGAGCGCCTCGGCGCCTGCCGTCGAAAGCTTGTAGATATCC CCGACTGCGACGAACATGAA
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKLPSGLGSIHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANVKRLRDLGIKVMIGHSAVNVDDADVVVVSSAIKRDN PELVAARTKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTTTTSMVAALLDAGNFDPTVINGGIINAYGTNARLGDGNWMV VEADESDGTFLKLPTEVAIVTNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITYGE NPQADVRLVDVDLKGGITRFGVVFRNRAGETVHEISGLKLPMPGKHNALNATAAIAVAHELKVPDDKIIEAIANFGGVKR RFTRTGEWNGVTVFDDYGHHPVEIAAVLKAARAASEGQVIAVVQPHRYSRLASLFDEFCTCFNDADHVVVAPVYAAGETP IEGADRDHLVQGLIAHGHRSVTALEGPERLAQVVGGLAKPGDYVICLGAGSISGWAYALPGELAALKPAA
Sequences:
>Translated_470_residues MKLPSGLGSIHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANVKRLRDLGIKVMIGHSAVNVDDADVVVVSSAIKRDN PELVAARTKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTTTTSMVAALLDAGNFDPTVINGGIINAYGTNARLGDGNWMV VEADESDGTFLKLPTEVAIVTNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITYGE NPQADVRLVDVDLKGGITRFGVVFRNRAGETVHEISGLKLPMPGKHNALNATAAIAVAHELKVPDDKIIEAIANFGGVKR RFTRTGEWNGVTVFDDYGHHPVEIAAVLKAARAASEGQVIAVVQPHRYSRLASLFDEFCTCFNDADHVVVAPVYAAGETP IEGADRDHLVQGLIAHGHRSVTALEGPERLAQVVGGLAKPGDYVICLGAGSISGWAYALPGELAALKPAA >Mature_470_residues MKLPSGLGSIHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANVKRLRDLGIKVMIGHSAVNVDDADVVVVSSAIKRDN PELVAARTKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTTTTSMVAALLDAGNFDPTVINGGIINAYGTNARLGDGNWMV VEADESDGTFLKLPTEVAIVTNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITYGE NPQADVRLVDVDLKGGITRFGVVFRNRAGETVHEISGLKLPMPGKHNALNATAAIAVAHELKVPDDKIIEAIANFGGVKR RFTRTGEWNGVTVFDDYGHHPVEIAAVLKAARAASEGQVIAVVQPHRYSRLASLFDEFCTCFNDADHVVVAPVYAAGETP IEGADRDHLVQGLIAHGHRSVTALEGPERLAQVVGGLAKPGDYVICLGAGSISGWAYALPGELAALKPAA
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=461, Percent_Identity=44.2516268980477, Blast_Score=322, Evalue=5e-89, Organism=Escherichia coli, GI1790680, Length=465, Percent_Identity=28.8172043010753, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_XANP2 (A7IEJ8)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001416098.1 - ProteinModelPortal: A7IEJ8 - SMR: A7IEJ8 - STRING: A7IEJ8 - GeneID: 5422631 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_1192 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - BioCyc: XAUT78245:XAUT_1192-MONOMER - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 50112; Mature: 50112
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPSGLGSIHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANVKRLRDLGIKVMIGHS CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHCCEEEEECCC AVNVDDADVVVVSSAIKRDNPELVAARTKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTT EECCCCCCEEEEEHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH TTSMVAALLDAGNFDPTVINGGIINAYGTNARLGDGNWMVVEADESDGTFLKLPTEVAIV HHHHHHHHHHCCCCCCEEEECCEEEECCCCCEECCCCEEEEEECCCCCCEEECCCEEEEE TNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITYGE ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEECC NPQADVRLVDVDLKGGITRFGVVFRNRAGETVHEISGLKLPMPGKHNALNATAAIAVAHE CCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHEEEEEHH LKVPDDKIIEAIANFGGVKRRFTRTGEWNGVTVFDDYGHHPVEIAAVLKAARAASEGQVI CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEE AVVQPHRYSRLASLFDEFCTCFNDADHVVVAPVYAAGETPIEGADRDHLVQGLIAHGHRS EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC VTALEGPERLAQVVGGLAKPGDYVICLGAGSISGWAYALPGELAALKPAA EEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MKLPSGLGSIHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANVKRLRDLGIKVMIGHS CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHCCEEEEECCC AVNVDDADVVVVSSAIKRDNPELVAARTKRLPVVRRAEMLAELMRLKSCVSIAGTHGKTT EECCCCCCEEEEEHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH TTSMVAALLDAGNFDPTVINGGIINAYGTNARLGDGNWMVVEADESDGTFLKLPTEVAIV HHHHHHHHHHCCCCCCEEEECCEEEECCCCCEECCCCEEEEEECCCCCCEEECCCEEEEE TNVDPEHLDHFKTFDKVQDAFKTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRVITYGE ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEECC NPQADVRLVDVDLKGGITRFGVVFRNRAGETVHEISGLKLPMPGKHNALNATAAIAVAHE CCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHEEEEEHH LKVPDDKIIEAIANFGGVKRRFTRTGEWNGVTVFDDYGHHPVEIAAVLKAARAASEGQVI CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEE AVVQPHRYSRLASLFDEFCTCFNDADHVVVAPVYAAGETPIEGADRDHLVQGLIAHGHRS EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC VTALEGPERLAQVVGGLAKPGDYVICLGAGSISGWAYALPGELAALKPAA EEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA