Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is catB1 [H]

Identifier: 154245080

GI number: 154245080

Start: 1302844

End: 1304034

Strand: Direct

Name: catB1 [H]

Synonym: Xaut_1132

Alternate gene names: 154245080

Gene position: 1302844-1304034 (Clockwise)

Preceding gene: 154245078

Following gene: 154245081

Centisome position: 24.54

GC content: 70.28

Gene sequence:

>1191_bases
ATGGGCATGACGATCCATGCCCCCCTCTCCAGACAAGCCCCCAGGATCGAGCGAGTCGAGACATTTCTCGTCGATCTGCC
AACGATCCGGCCCCACAAGCTGTCGGTGGCGACCATGGAGGGGCAGACCCTGATGGTGGTCCGCCTCCACATGTCCGACG
GCATGGTGGGGGTGGGCGAGGGCACCACCATCGCCGGCCTGGCCTACGGTCCGGAGAGCCCCGAAGGTATGAAGTTGACG
ATCGACGCCTATATGGCGCCGGTGCTGCTGGCCGCCGATCCCACCCGGATCCAGGCCACCATGGCCACCATCGGCAAGGT
GGTGAAGGGCAATCATTTCGCCAAGTCCGCCGTCGAGACCGCCCTGTTCGACGCCCAGGGCAAGCGCAGCGGCCTGCCGA
TTTCCGAGCTTCTGGGCGGGCGGGTGCGGGACCGCCTGCCGGTGGCCTGGACGCTGGCCTCCGGCGACACCGCCCGCGAC
ATCGCCGAGGCGGAAGAGATGCTGGCGCGCCGCCGCCACCGCATCTTCAAGCTGAAGATCGGCCGCAATGCGGTGCGGGC
GGACGTGGCGCACGTGGCCGCCATCAAGGCGGCGCTGGGCGAGCGGGCCAGCGTGCGCGTGGACGTGAACATGGCCTGGA
GCGAGAGCGAAGCGGCCTATGGCCTGAGGGCGCTGGCCGATGCCGGCTGCGACCTGGTGGAGCAGCCGGTGGCCTCCGCC
GAGGCGCTGGCCCGGCTCACCGCGCGGGGCGTGGTGCCGGTGATGGCGGACGAGATCCTGCAAGGTCCCGCCAGCGCGTT
CGAGCTGGCCCGCATGCGCGCCGCCGATGTGTTCGCGGTGAAGATCGAGCAGTCCGGCGGCCTCATCGCCGCCGCCAACG
TGGGTGCCATCGCCGATGCGGCGGGCATCGAGCTGTATGGCGGCACCATGCTGGAAGGCGCGGTGTCGACCATCGCCGCC
GCCCACCTGTTTTCCGCCTTCCCCCGCCTCGGCTTCGGCACCGAATTGTTCGGCCCGCTGCTCATCACCGAGGAGATCCT
GACCGAGCCCCTCGACTACAGCGACTTCTCGCTGGAGGTGCCCAGGGGGCCGGGCCTCGGCATCACCTTGGACGAGGAGC
GCATCGCCCGCTTCCGCCGCGACGGCGCGCGCCGGACGCTGGTGCTCGCGGCAACCAAGGCCGGGAGCTGA

Upstream 100 bases:

>100_bases
CGGCGACGAAATAGCGGAGCTGGCGGACATCCATGATACCCTCGAAGTATAATAGTTGACCAACTCGGTTTTGGATCCGC
GCCGCGGCGCGCCGTAGAAA

Downstream 100 bases:

>100_bases
GCCATGGCGCGCTCCCTCACATTCCCTGCCTGCCCACCCGCCGGCCCGCATGCGCGGGACCGCTGGATCTGACCCAATTC
GTTAAGAAAATCAGGAGGAA

Product: muconate and chloromuconate cycloisomerase

Products: NA

Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLT
IDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARD
IAEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA
EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAA
AHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS

Sequences:

>Translated_396_residues
MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLT
IDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARD
IAEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA
EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAA
AHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS
>Mature_395_residues
GMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLTI
DAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDI
AEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASAE
ALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAAA
HLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS

Specific function: Catalyzes a syn cycloisomerization [H]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI48994953, Length=365, Percent_Identity=23.8356164383562, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013370
- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =5.5.1.1 [H]

Molecular weight: Translated: 41927; Mature: 41796

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGE
CCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEECCC
GTTIAGLAYGPESPEGMKLTIDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVET
CCEEEEEEECCCCCCCEEEEEEHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDIAEAEEMLARRRHRIFKLKI
HHHCCCCCCCCCCHHHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE
GRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADA
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCCEEEECCCCCHHCC
AGIELYGGTMLEGAVSTIAAAHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEV
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC
PRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS
CCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure 
GMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGE
CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEECCC
GTTIAGLAYGPESPEGMKLTIDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVET
CCEEEEEEECCCCCCCEEEEEEHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDIAEAEEMLARRRHRIFKLKI
HHHCCCCCCCCCCHHHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE
GRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADA
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCCEEEECCCCCHHCC
AGIELYGGTMLEGAVSTIAAAHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEV
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC
PRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS
CCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9473520; 9260969 [H]