| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is catB1 [H]
Identifier: 154245080
GI number: 154245080
Start: 1302844
End: 1304034
Strand: Direct
Name: catB1 [H]
Synonym: Xaut_1132
Alternate gene names: 154245080
Gene position: 1302844-1304034 (Clockwise)
Preceding gene: 154245078
Following gene: 154245081
Centisome position: 24.54
GC content: 70.28
Gene sequence:
>1191_bases ATGGGCATGACGATCCATGCCCCCCTCTCCAGACAAGCCCCCAGGATCGAGCGAGTCGAGACATTTCTCGTCGATCTGCC AACGATCCGGCCCCACAAGCTGTCGGTGGCGACCATGGAGGGGCAGACCCTGATGGTGGTCCGCCTCCACATGTCCGACG GCATGGTGGGGGTGGGCGAGGGCACCACCATCGCCGGCCTGGCCTACGGTCCGGAGAGCCCCGAAGGTATGAAGTTGACG ATCGACGCCTATATGGCGCCGGTGCTGCTGGCCGCCGATCCCACCCGGATCCAGGCCACCATGGCCACCATCGGCAAGGT GGTGAAGGGCAATCATTTCGCCAAGTCCGCCGTCGAGACCGCCCTGTTCGACGCCCAGGGCAAGCGCAGCGGCCTGCCGA TTTCCGAGCTTCTGGGCGGGCGGGTGCGGGACCGCCTGCCGGTGGCCTGGACGCTGGCCTCCGGCGACACCGCCCGCGAC ATCGCCGAGGCGGAAGAGATGCTGGCGCGCCGCCGCCACCGCATCTTCAAGCTGAAGATCGGCCGCAATGCGGTGCGGGC GGACGTGGCGCACGTGGCCGCCATCAAGGCGGCGCTGGGCGAGCGGGCCAGCGTGCGCGTGGACGTGAACATGGCCTGGA GCGAGAGCGAAGCGGCCTATGGCCTGAGGGCGCTGGCCGATGCCGGCTGCGACCTGGTGGAGCAGCCGGTGGCCTCCGCC GAGGCGCTGGCCCGGCTCACCGCGCGGGGCGTGGTGCCGGTGATGGCGGACGAGATCCTGCAAGGTCCCGCCAGCGCGTT CGAGCTGGCCCGCATGCGCGCCGCCGATGTGTTCGCGGTGAAGATCGAGCAGTCCGGCGGCCTCATCGCCGCCGCCAACG TGGGTGCCATCGCCGATGCGGCGGGCATCGAGCTGTATGGCGGCACCATGCTGGAAGGCGCGGTGTCGACCATCGCCGCC GCCCACCTGTTTTCCGCCTTCCCCCGCCTCGGCTTCGGCACCGAATTGTTCGGCCCGCTGCTCATCACCGAGGAGATCCT GACCGAGCCCCTCGACTACAGCGACTTCTCGCTGGAGGTGCCCAGGGGGCCGGGCCTCGGCATCACCTTGGACGAGGAGC GCATCGCCCGCTTCCGCCGCGACGGCGCGCGCCGGACGCTGGTGCTCGCGGCAACCAAGGCCGGGAGCTGA
Upstream 100 bases:
>100_bases CGGCGACGAAATAGCGGAGCTGGCGGACATCCATGATACCCTCGAAGTATAATAGTTGACCAACTCGGTTTTGGATCCGC GCCGCGGCGCGCCGTAGAAA
Downstream 100 bases:
>100_bases GCCATGGCGCGCTCCCTCACATTCCCTGCCTGCCCACCCGCCGGCCCGCATGCGCGGGACCGCTGGATCTGACCCAATTC GTTAAGAAAATCAGGAGGAA
Product: muconate and chloromuconate cycloisomerase
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLT IDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARD IAEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAA AHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS
Sequences:
>Translated_396_residues MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLT IDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARD IAEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAA AHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS >Mature_395_residues GMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGEGTTIAGLAYGPESPEGMKLTI DAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVETALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDI AEAEEMLARRRHRIFKLKIGRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASAE ALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADAAGIELYGGTMLEGAVSTIAAA HLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEVPRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994953, Length=365, Percent_Identity=23.8356164383562, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 41927; Mature: 41796
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGE CCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEECCC GTTIAGLAYGPESPEGMKLTIDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVET CCEEEEEEECCCCCCCEEEEEEHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH ALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDIAEAEEMLARRRHRIFKLKI HHHCCCCCCCCCCHHHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE GRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCCEEEECCCCCHHCC AGIELYGGTMLEGAVSTIAAAHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEV CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC PRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS CCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCC >Mature Secondary Structure GMTIHAPLSRQAPRIERVETFLVDLPTIRPHKLSVATMEGQTLMVVRLHMSDGMVGVGE CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEECCC GTTIAGLAYGPESPEGMKLTIDAYMAPVLLAADPTRIQATMATIGKVVKGNHFAKSAVET CCEEEEEEECCCCCCCEEEEEEHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH ALFDAQGKRSGLPISELLGGRVRDRLPVAWTLASGDTARDIAEAEEMLARRRHRIFKLKI HHHCCCCCCCCCCHHHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE GRNAVRADVAHVAAIKAALGERASVRVDVNMAWSESEAAYGLRALADAGCDLVEQPVASA CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH EALARLTARGVVPVMADEILQGPASAFELARMRAADVFAVKIEQSGGLIAAANVGAIADA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCCEEEECCCCCHHCC AGIELYGGTMLEGAVSTIAAAHLFSAFPRLGFGTELFGPLLITEEILTEPLDYSDFSLEV CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC PRGPGLGITLDEERIARFRRDGARRTLVLAATKAGS CCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9473520; 9260969 [H]