| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is nfrA1 [H]
Identifier: 154245078
GI number: 154245078
Start: 1300965
End: 1301825
Strand: Direct
Name: nfrA1 [H]
Synonym: Xaut_1130
Alternate gene names: 154245078
Gene position: 1300965-1301825 (Clockwise)
Preceding gene: 154245077
Following gene: 154245080
Centisome position: 24.51
GC content: 71.78
Gene sequence:
>861_bases ATGTCTGCCACTCTGTCTGAGGCCCGCCCCGCGCCGGCCCCGTCCGCCGATGCCCGCGCCCTGCTGGAGGCCCGCTACGG TGCCGCCGAGGCGCCCGCCGGCATCCTGCTCAACGACACCATCGCCGCGCTGCTCTCCCACCGCACCGTGCGTGCCTTCT CCGACCGTCCCCTGCCGGAGGGGCTGATCGAGACGCTGGTGGCGGCGGCGCAGTCGGCGCCGTCCTCATCCAACCTTCAG ACCTTCAGCGTGGTGGCGGTGGAAAGCCCGGCCACCAAGGCCCGCCTCGCCGAGGTGGCGGGCGGCCAGAAGCATGTGGT GGAAGCTCCTCTGGTGCTGGTCTGGCTCGCCGATCTCTCCCGCCTGGAGGAGATCGGCCGCCGCGCCGGGGCGCCCACCG ATGCCCTGTCCTTCCTCGAAACCCTGTTCGTGGGCATCATCGATGCCGCGCTGGCGGCGCAGAATGCGCTGGTGGCGCTG GAATCCCTCGGCCTCGGCGGCGTTTATCTCGGCGCCCTGCGCAACAAGCCGGAGGTGGTCGCCGAGCTGCTGGGCCTGCC GCCCAACGTGGTGGGCGTGTTCGGCCTCGCCGTCGGCTATCCCGATCCGCAGCGCCCGGCGGATGTGAAGCCGCGCATCT CCCAGCGCCTCGTGCTCCACCGCGAGCGCTATGACGCCAGCCTGCCGCAGGCGGCGCTGGACCATTATGAGGACGCTCTG AAGGCGTTCCAGCACGGCCAGAATCTCCCCGAGGTGGGCTGGGCCAGCGTGGCGCTGGCCCGCGTGCGCGGGGCGGAGTC CTTAAGCGGGCGCGACCGCATCCCGGAAGTGCTGAAGGCGCTCGGCTTCGGCCTGCGTTGA
Upstream 100 bases:
>100_bases GTGCCATCGGGCAAACGGTCTTGTTGCTTGAAGTTCGGCACGGGAACGGTTCAGCTTGCCGCACGCTGAACCGTTCCCGC CTCCGCATTATGGAGCTGTC
Downstream 100 bases:
>100_bases GGAGCGACCGGCGCCGCGGTCACGGCGGCAGGAGCCGGTTCTCCGACAGCTTCAGCCAGTCGGGCTGGTCGGCGTACATC TCGCGGATCAGCTGCTTGAT
Product: nitroreductase
Products: NA
Alternate protein names: NADPH-dependent FMN reductase; NADPH-dependent nitroreductase; NADPH-dependent oxidoreductase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSATLSEARPAPAPSADARALLEARYGAAEAPAGILLNDTIAALLSHRTVRAFSDRPLPEGLIETLVAAAQSAPSSSNLQ TFSVVAVESPATKARLAEVAGGQKHVVEAPLVLVWLADLSRLEEIGRRAGAPTDALSFLETLFVGIIDAALAAQNALVAL ESLGLGGVYLGALRNKPEVVAELLGLPPNVVGVFGLAVGYPDPQRPADVKPRISQRLVLHRERYDASLPQAALDHYEDAL KAFQHGQNLPEVGWASVALARVRGAESLSGRDRIPEVLKALGFGLR
Sequences:
>Translated_286_residues MSATLSEARPAPAPSADARALLEARYGAAEAPAGILLNDTIAALLSHRTVRAFSDRPLPEGLIETLVAAAQSAPSSSNLQ TFSVVAVESPATKARLAEVAGGQKHVVEAPLVLVWLADLSRLEEIGRRAGAPTDALSFLETLFVGIIDAALAAQNALVAL ESLGLGGVYLGALRNKPEVVAELLGLPPNVVGVFGLAVGYPDPQRPADVKPRISQRLVLHRERYDASLPQAALDHYEDAL KAFQHGQNLPEVGWASVALARVRGAESLSGRDRIPEVLKALGFGLR >Mature_285_residues SATLSEARPAPAPSADARALLEARYGAAEAPAGILLNDTIAALLSHRTVRAFSDRPLPEGLIETLVAAAQSAPSSSNLQT FSVVAVESPATKARLAEVAGGQKHVVEAPLVLVWLADLSRLEEIGRRAGAPTDALSFLETLFVGIIDAALAAQNALVALE SLGLGGVYLGALRNKPEVVAELLGLPPNVVGVFGLAVGYPDPQRPADVKPRISQRLVLHRERYDASLPQAALDHYEDALK AFQHGQNLPEVGWASVALARVRGAESLSGRDRIPEVLKALGFGLR
Specific function: Reduces FMNH(2) to FMN, with NADPH as reductant. It also reduces nitroaromatic compounds, quinones and azo dyes [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=204, Percent_Identity=39.2156862745098, Blast_Score=137, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 30055; Mature: 29924
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATLSEARPAPAPSADARALLEARYGAAEAPAGILLNDTIAALLSHRTVRAFSDRPLPE CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCH GLIETLVAAAQSAPSSSNLQTFSVVAVESPATKARLAEVAGGQKHVVEAPLVLVWLADLS HHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLEEIGRRAGAPTDALSFLETLFVGIIDAALAAQNALVALESLGLGGVYLGALRNKPEVV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH AELLGLPPNVVGVFGLAVGYPDPQRPADVKPRISQRLVLHRERYDASLPQAALDHYEDAL HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KAFQHGQNLPEVGWASVALARVRGAESLSGRDRIPEVLKALGFGLR HHHHCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SATLSEARPAPAPSADARALLEARYGAAEAPAGILLNDTIAALLSHRTVRAFSDRPLPE CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCH GLIETLVAAAQSAPSSSNLQTFSVVAVESPATKARLAEVAGGQKHVVEAPLVLVWLADLS HHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLEEIGRRAGAPTDALSFLETLFVGIIDAALAAQNALVALESLGLGGVYLGALRNKPEVV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH AELLGLPPNVVGVFGLAVGYPDPQRPADVKPRISQRLVLHRERYDASLPQAALDHYEDAL HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KAFQHGQNLPEVGWASVALARVRGAESLSGRDRIPEVLKALGFGLR HHHHCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 9836433 [H]