| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yxeK [H]
Identifier: 154245077
GI number: 154245077
Start: 1299444
End: 1300850
Strand: Direct
Name: yxeK [H]
Synonym: Xaut_1129
Alternate gene names: 154245077
Gene position: 1299444-1300850 (Clockwise)
Preceding gene: 154245076
Following gene: 154245078
Centisome position: 24.48
GC content: 69.3
Gene sequence:
>1407_bases ATGAGCCGCAAGCGGGAGCTGCGCTTCAACGCCTTCAACATGGCCGCCCCCGGCCACACCTGGGCCGGCCTGTGGGCCCA CCCGCGCGACAAGGCCATCGACTACAACAGCCTCGACTACTGGATCGAGCTGGCCCAGACCGCCGAGCGCGGCCTGCTCG ACGGCATCTTCATCGCCGACGTGTTCGGCATCTATGACGTGTATGGCGGCACGCCGGACGCGGCCTTGCTCTCGGCCGCG CAGACGCCCCATGTCGACCCCACGCTGGTGGTGCCGGTGATGGCGCAGGCGACGAAGCATATCGGCTTCGGCGTCACCGC CAACCTCACCTACGAGCATCCCTACCAGTTCGCCCGCCGCTTCTCGACCCTCGACCACCTCACCGGCGGGCGGGTGGGCT GGAACATCGTCACCGGTTATCTCGACAGCGGCGCCAAGGGCATGGGCCATGTGGCCAACCGCGCCCACGATGCCCGCTAC GAGGCGGCGGAAGACTTCCTCGCGGCCGTCTACAAGCTATGGGAATCCAGCTGGGAAGATGGGGCGGTGCGCCGCGACCG GGCGGCGCGGGTGTTCACCGATCCGGCCAAGGTCCACCGCATCCATCACGACGGGCCTTACTATCAGGTCGATGGCATCC ACCTCGCCGAGCCCTCGCCCCAGCGCACGCCGGTGCTCTACCAGGCCGGCGCCTCCGATCGTGGGCGGCTGTTCGCGGCG AAGCATTCCGAGGGCATCTTCCTAAACGGCCAGACCCGGCCGATCCTTGCTGAATCCGTACGCGCGATCCGGCAGGCGGC GCAGTCCTTCGGCCGCGACCCCTACGACATCCGCATGTTCCCCGGCGCCACGGTGATCGTCGCGCCGACGCGGGCGGAGG CCCTCGATCGGCTCGCCGACTATGCGCAATATGTGCACACCGCCGGCCAGCTGGCCCTGCTCTCCGGCTGGACCGGGGCG GACCTCTCCAACGTCGATCCGGACGACGCCATCTCCTACGTGAAGAGCAACGCCATCCAGTCCACGCTGGAAAACCTCAC CTTGCGCAGTGCCGAGCCGCTGAAGGTGAAGGACCTCGCCACCCTCTCCGCCATCGGCGCCCGCGCGCCCTTCATCGTGG GTTCGCCCGGCGAGGTGGCGGACGCGATCCTGTCCTGGGTGGAGGACACGGATATCGACGGCTTCAACCTGAACCGCCTC GTCTCCCACGAGACGCTGGCGGCCTTCGTGGATCTGGTGGTGCCCGAGCTTCAGGATCGCGGCGTCTACAAGACCGCCTA TGCCGACGGCCCCCTGCGCCAGAAGCTGTTCCCCGGCCGCGGCCCCACCCTTCCCGCTACCCACCCCGCCGCCGGTTTCC GGCGCGGAGCGCTCGCGCCGGCGGAGCCGGTGGCGGCCGGGGCCTGA
Upstream 100 bases:
>100_bases ACAAGGCGCGGGAAGTGGGCAATTACGCGCTCAACGGCACCATCACCCCGACCCCGCTCTACAGCTGACGCGCAGTAATA AGGCCAAGAGGAGATACCCC
Downstream 100 bases:
>100_bases GTGTCGGGAGACCGGTGCCATCGGGCAAACGGTCTTGTTGCTTGAAGTTCGGCACGGGAACGGTTCAGCTTGCCGCACGC TGAACCGTTCCCGCCTCCGC
Product: hypothetical protein
Products: an aldehyde; SO3; H2O; FMN [C]
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSRKRELRFNAFNMAAPGHTWAGLWAHPRDKAIDYNSLDYWIELAQTAERGLLDGIFIADVFGIYDVYGGTPDAALLSAA QTPHVDPTLVVPVMAQATKHIGFGVTANLTYEHPYQFARRFSTLDHLTGGRVGWNIVTGYLDSGAKGMGHVANRAHDARY EAAEDFLAAVYKLWESSWEDGAVRRDRAARVFTDPAKVHRIHHDGPYYQVDGIHLAEPSPQRTPVLYQAGASDRGRLFAA KHSEGIFLNGQTRPILAESVRAIRQAAQSFGRDPYDIRMFPGATVIVAPTRAEALDRLADYAQYVHTAGQLALLSGWTGA DLSNVDPDDAISYVKSNAIQSTLENLTLRSAEPLKVKDLATLSAIGARAPFIVGSPGEVADAILSWVEDTDIDGFNLNRL VSHETLAAFVDLVVPELQDRGVYKTAYADGPLRQKLFPGRGPTLPATHPAAGFRRGALAPAEPVAAGA
Sequences:
>Translated_468_residues MSRKRELRFNAFNMAAPGHTWAGLWAHPRDKAIDYNSLDYWIELAQTAERGLLDGIFIADVFGIYDVYGGTPDAALLSAA QTPHVDPTLVVPVMAQATKHIGFGVTANLTYEHPYQFARRFSTLDHLTGGRVGWNIVTGYLDSGAKGMGHVANRAHDARY EAAEDFLAAVYKLWESSWEDGAVRRDRAARVFTDPAKVHRIHHDGPYYQVDGIHLAEPSPQRTPVLYQAGASDRGRLFAA KHSEGIFLNGQTRPILAESVRAIRQAAQSFGRDPYDIRMFPGATVIVAPTRAEALDRLADYAQYVHTAGQLALLSGWTGA DLSNVDPDDAISYVKSNAIQSTLENLTLRSAEPLKVKDLATLSAIGARAPFIVGSPGEVADAILSWVEDTDIDGFNLNRL VSHETLAAFVDLVVPELQDRGVYKTAYADGPLRQKLFPGRGPTLPATHPAAGFRRGALAPAEPVAAGA >Mature_467_residues SRKRELRFNAFNMAAPGHTWAGLWAHPRDKAIDYNSLDYWIELAQTAERGLLDGIFIADVFGIYDVYGGTPDAALLSAAQ TPHVDPTLVVPVMAQATKHIGFGVTANLTYEHPYQFARRFSTLDHLTGGRVGWNIVTGYLDSGAKGMGHVANRAHDARYE AAEDFLAAVYKLWESSWEDGAVRRDRAARVFTDPAKVHRIHHDGPYYQVDGIHLAEPSPQRTPVLYQAGASDRGRLFAAK HSEGIFLNGQTRPILAESVRAIRQAAQSFGRDPYDIRMFPGATVIVAPTRAEALDRLADYAQYVHTAGQLALLSGWTGAD LSNVDPDDAISYVKSNAIQSTLENLTLRSAEPLKVKDLATLSAIGARAPFIVGSPGEVADAILSWVEDTDIDGFNLNRLV SHETLAAFVDLVVPELQDRGVYKTAYADGPLRQKLFPGRGPTLPATHPAAGFRRGALAPAEPVAAGA
Specific function: Involved In Desulfonation Of Aliphatic Sulfonates. Catalyzes The Conversion Of Pentanesulfonic Acid To Sulfite And Pentaldehyde And Is Able To Desulfonate A Wide Range Of Sulfonated Substrates Including C-2 To C-10 Unsubstituted Linear Alkanesulfonates, S
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: 1.14.14.5 [C]
Molecular weight: Translated: 50876; Mature: 50744
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKRELRFNAFNMAAPGHTWAGLWAHPRDKAIDYNSLDYWIELAQTAERGLLDGIFIAD CCCCCCCEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFGIYDVYGGTPDAALLSAAQTPHVDPTLVVPVMAQATKHIGFGVTANLTYEHPYQFARR HHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH FSTLDHLTGGRVGWNIVTGYLDSGAKGMGHVANRAHDARYEAAEDFLAAVYKLWESSWED HHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GAVRRDRAARVFTDPAKVHRIHHDGPYYQVDGIHLAEPSPQRTPVLYQAGASDRGRLFAA CCHHHCCCCCEECCHHHHHEEECCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCEEEE KHSEGIFLNGQTRPILAESVRAIRQAAQSFGRDPYDIRMFPGATVIVAPTRAEALDRLAD ECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHH YAQYVHTAGQLALLSGWTGADLSNVDPDDAISYVKSNAIQSTLENLTLRSAEPLKVKDLA HHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TLSAIGARAPFIVGSPGEVADAILSWVEDTDIDGFNLNRLVSHETLAAFVDLVVPELQDR HHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GVYKTAYADGPLRQKLFPGRGPTLPATHPAAGFRRGALAPAEPVAAGA CEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRKRELRFNAFNMAAPGHTWAGLWAHPRDKAIDYNSLDYWIELAQTAERGLLDGIFIAD CCCCCCEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFGIYDVYGGTPDAALLSAAQTPHVDPTLVVPVMAQATKHIGFGVTANLTYEHPYQFARR HHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH FSTLDHLTGGRVGWNIVTGYLDSGAKGMGHVANRAHDARYEAAEDFLAAVYKLWESSWED HHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GAVRRDRAARVFTDPAKVHRIHHDGPYYQVDGIHLAEPSPQRTPVLYQAGASDRGRLFAA CCHHHCCCCCEECCHHHHHEEECCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCEEEE KHSEGIFLNGQTRPILAESVRAIRQAAQSFGRDPYDIRMFPGATVIVAPTRAEALDRLAD ECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHH YAQYVHTAGQLALLSGWTGADLSNVDPDDAISYVKSNAIQSTLENLTLRSAEPLKVKDLA HHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TLSAIGARAPFIVGSPGEVADAILSWVEDTDIDGFNLNRLVSHETLAAFVDLVVPELQDR HHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GVYKTAYADGPLRQKLFPGRGPTLPATHPAAGFRRGALAPAEPVAAGA CEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: an alkanesulfonate; O2; FMNH2 [C]
Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]