| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is degQ [C]
Identifier: 154244947
GI number: 154244947
Start: 1115303
End: 1117114
Strand: Reverse
Name: degQ [C]
Synonym: Xaut_0997
Alternate gene names: 154244947
Gene position: 1117114-1115303 (Counterclockwise)
Preceding gene: 154244948
Following gene: 154244946
Centisome position: 21.04
GC content: 67.27
Gene sequence:
>1812_bases ATGAGCGCGGCATCCATAGACCGGATCATCATCCGGCATCTGTCCGGCTCCAAGGCCAATCAGATCGAGCAGATTCCGGT CCAGGACCTCCAGGAGGTGACCATCGGGCGCGATCCTGCCTCGACCATCGCCTTCGACGCCAAGCGCGACGACGTGGTCA GCCGCCATCACGCCGCCATACGCATCCCGGCCAACGACGACAGCGCGTTCCGGCTGGTGGATCTCAACTCCAGCAACGGC ACGCTCCTCAATGGCCAACCGGTGAAGGAGGATGCCGAACTGCTGCCCGAGGACACCATCGAGTTGGGCAAGAACGGGCC GAAATTCGTATTCGACGTGCAGCCCCGTCCGCCGGCCATGAGCGCGCGTACCCGCATCATCAGCGCCGTGGACACCACCG CGACGCGCGTGGTGAACGCCGTCGGCGCCACCGGGCAGCTCGACGGCGACAAGACCGGGCAGGTGACGGCAACCACGGCC TCCATGGCCGAGCCGCCCAAGGCCGGCGTCGGCAAGGAAACGGTGATGCGTATGCTCGGCGAGGAGCGGCGCAGCACCAG CCGGGTCTGGGCGGCCTCGCTCGCCGGCGTGGTCGCCTTCGTGGCGCTGGTGGGCGGCGCCTTCTACTGGCGCCACCTCA ACGAACTCGGCGAAATTCGCGAGGCCCAGGCCCGCGACAACGCCCGCGTCGCCACCGAGGCCTCCACTAACCTGTCCCAG CAGCTGGGCATGTCGGCGCAGCAGATCGTCAGTCGCTATGGCGATGCGGTGCTGAAGATCTACCTCCAATGGCGCGTCTT CGACCAGGAGACCGGCAAGCCCATCTTCCATAAGACCGTTGTCTACGACGGGCGCACCTATCCCGCCTATGTGCGGCTGC CCGGCGACCTCGGCGTGGTGCGCTGGCTGACGCTGGACGACGAGAACCGCAGCAATCCGAGCATCGGCGAGGCCGGCGAG GGCAGCGGCTTCGTGGTGAGCGAGCAGGGCTTCATCCTCACCAACAAGCACGTGGCCGCCGGCTGGATGGTTCCCTACGA CGCCTCCGTCGGCCAGTACGGCATCGTGTTCGACCTCAAGCAGCCGGCCGCCTTCAAGAAGCGCGACAAGGCGACCATGA TCAATCTCGAAGGGGCCTCGGACGAAGCCTCCCGGCTGCGGCGCTGGGTGCCGGAGGCGGGGGGCGTGGTGTTCCATCCC AACGTCGCCATCCCCATCGGCTCCATCGACGGCCTCGACAGCTCCATCGCCAAGCGTGTGTTCATCGGCCGCAACGAATA TCTGGAGGCCCGCTTCGCCGGCAGCCGGCTGAGCATCAACGCCACACTGGTGCGGCCCTCGTCCGACGCCGACGCCGCGC TCATCAAGATCGATTCCCCCCAGCCCCTGAACAAGATCGACATCTCCGCCAACGATGAGCTTCGCGTCGGCCAGAAGGTG ATCGACCTCGGCTATCCGGCGGTGTCGGTGGAGACCTACACCCAGTTCACCACCCGCGAGGCTGGCGGCCCCTCGCGCGT CCATGACGAGTTGGTGCCGCAGCCCAGCGTGAACGAGGGCATCATCTCCGCCCTTGGCAGCGCCTCGCGGCGGGAGGGCG ACCAGACTACGCGCTCCAGCGGCGGCGACGTGTTCCAGATGAGCATCAACACCAGTGGCCCCGGCAACAGCGGCGGCCCG GTATTTAATGCCGAGGGCAAGGTGATCGGACTGCACACTTACGGCCGCAAGGTCGGCGATGCGCGGGTAACCCTCGGCGT CCCGATCCGCTACGGCCGCGACCTGCTCCAGCCGCAGCGCGCCGCGCAGTGA
Upstream 100 bases:
>100_bases TGCGGACCATTCTTGTCTGCGTAAGCAATGGCCCTGGCCGTTGGTGGCATCTCGCCGTTTCGGTGGAGCCCGGCCCGGCA TACAGGATAAGGGGGGCAGC
Downstream 100 bases:
>100_bases CGGGAGGCGCGCCATGACTGCCCGCGTCGCCAACGCCCGCGTCGATGCTACGCCTGCCCTGCGCGCGCGCGGCGCCATGC TGACCCATGTGGGCCGGGTG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein; FHA Domain Protein
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MSAASIDRIIIRHLSGSKANQIEQIPVQDLQEVTIGRDPASTIAFDAKRDDVVSRHHAAIRIPANDDSAFRLVDLNSSNG TLLNGQPVKEDAELLPEDTIELGKNGPKFVFDVQPRPPAMSARTRIISAVDTTATRVVNAVGATGQLDGDKTGQVTATTA SMAEPPKAGVGKETVMRMLGEERRSTSRVWAASLAGVVAFVALVGGAFYWRHLNELGEIREAQARDNARVATEASTNLSQ QLGMSAQQIVSRYGDAVLKIYLQWRVFDQETGKPIFHKTVVYDGRTYPAYVRLPGDLGVVRWLTLDDENRSNPSIGEAGE GSGFVVSEQGFILTNKHVAAGWMVPYDASVGQYGIVFDLKQPAAFKKRDKATMINLEGASDEASRLRRWVPEAGGVVFHP NVAIPIGSIDGLDSSIAKRVFIGRNEYLEARFAGSRLSINATLVRPSSDADAALIKIDSPQPLNKIDISANDELRVGQKV IDLGYPAVSVETYTQFTTREAGGPSRVHDELVPQPSVNEGIISALGSASRREGDQTTRSSGGDVFQMSINTSGPGNSGGP VFNAEGKVIGLHTYGRKVGDARVTLGVPIRYGRDLLQPQRAAQ
Sequences:
>Translated_603_residues MSAASIDRIIIRHLSGSKANQIEQIPVQDLQEVTIGRDPASTIAFDAKRDDVVSRHHAAIRIPANDDSAFRLVDLNSSNG TLLNGQPVKEDAELLPEDTIELGKNGPKFVFDVQPRPPAMSARTRIISAVDTTATRVVNAVGATGQLDGDKTGQVTATTA SMAEPPKAGVGKETVMRMLGEERRSTSRVWAASLAGVVAFVALVGGAFYWRHLNELGEIREAQARDNARVATEASTNLSQ QLGMSAQQIVSRYGDAVLKIYLQWRVFDQETGKPIFHKTVVYDGRTYPAYVRLPGDLGVVRWLTLDDENRSNPSIGEAGE GSGFVVSEQGFILTNKHVAAGWMVPYDASVGQYGIVFDLKQPAAFKKRDKATMINLEGASDEASRLRRWVPEAGGVVFHP NVAIPIGSIDGLDSSIAKRVFIGRNEYLEARFAGSRLSINATLVRPSSDADAALIKIDSPQPLNKIDISANDELRVGQKV IDLGYPAVSVETYTQFTTREAGGPSRVHDELVPQPSVNEGIISALGSASRREGDQTTRSSGGDVFQMSINTSGPGNSGGP VFNAEGKVIGLHTYGRKVGDARVTLGVPIRYGRDLLQPQRAAQ >Mature_602_residues SAASIDRIIIRHLSGSKANQIEQIPVQDLQEVTIGRDPASTIAFDAKRDDVVSRHHAAIRIPANDDSAFRLVDLNSSNGT LLNGQPVKEDAELLPEDTIELGKNGPKFVFDVQPRPPAMSARTRIISAVDTTATRVVNAVGATGQLDGDKTGQVTATTAS MAEPPKAGVGKETVMRMLGEERRSTSRVWAASLAGVVAFVALVGGAFYWRHLNELGEIREAQARDNARVATEASTNLSQQ LGMSAQQIVSRYGDAVLKIYLQWRVFDQETGKPIFHKTVVYDGRTYPAYVRLPGDLGVVRWLTLDDENRSNPSIGEAGEG SGFVVSEQGFILTNKHVAAGWMVPYDASVGQYGIVFDLKQPAAFKKRDKATMINLEGASDEASRLRRWVPEAGGVVFHPN VAIPIGSIDGLDSSIAKRVFIGRNEYLEARFAGSRLSINATLVRPSSDADAALIKIDSPQPLNKIDISANDELRVGQKVI DLGYPAVSVETYTQFTTREAGGPSRVHDELVPQPSVNEGIISALGSASRREGDQTTRSSGGDVFQMSINTSGPGNSGGPV FNAEGKVIGLHTYGRKVGDARVTLGVPIRYGRDLLQPQRAAQ
Specific function: Protease With A Shared Specificity With Degp. [C]
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.- [C]
Molecular weight: Translated: 64936; Mature: 64805
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASIDRIIIRHLSGSKANQIEQIPVQDLQEVTIGRDPASTIAFDAKRDDVVSRHHAAI CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEECCCCHHHHHCCCEEE RIPANDDSAFRLVDLNSSNGTLLNGQPVKEDAELLPEDTIELGKNGPKFVFDVQPRPPAM EEECCCCCEEEEEEECCCCCEEECCCCCCHHHHHCCHHHHHHCCCCCEEEEECCCCCCCH SARTRIISAVDTTATRVVNAVGATGQLDGDKTGQVTATTASMAEPPKAGVGKETVMRMLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH EERRSTSRVWAASLAGVVAFVALVGGAFYWRHLNELGEIREAQARDNARVATEASTNLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH QLGMSAQQIVSRYGDAVLKIYLQWRVFDQETGKPIFHKTVVYDGRTYPAYVRLPGDLGVV HHCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEE RWLTLDDENRSNPSIGEAGEGSGFVVSEQGFILTNKHVAAGWMVPYDASVGQYGIVFDLK EEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEEECCCCCCCCEEEEEECC QPAAFKKRDKATMINLEGASDEASRLRRWVPEAGGVVFHPNVAIPIGSIDGLDSSIAKRV CCCCHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCCCCHHHHHHH FIGRNEYLEARFAGSRLSINATLVRPSSDADAALIKIDSPQPLNKIDISANDELRVGQKV HCCCCCEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCCHHHCHHH IDLGYPAVSVETYTQFTTREAGGPSRVHDELVPQPSVNEGIISALGSASRREGDQTTRSS HHCCCCEEEEEHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCHHHHCC GGDVFQMSINTSGPGNSGGPVFNAEGKVIGLHTYGRKVGDARVTLGVPIRYGRDLLQPQR CCCEEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEECCHHHCHHHHCHHH AAQ HCC >Mature Secondary Structure SAASIDRIIIRHLSGSKANQIEQIPVQDLQEVTIGRDPASTIAFDAKRDDVVSRHHAAI CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEECCCCHHHHHCCCEEE RIPANDDSAFRLVDLNSSNGTLLNGQPVKEDAELLPEDTIELGKNGPKFVFDVQPRPPAM EEECCCCCEEEEEEECCCCCEEECCCCCCHHHHHCCHHHHHHCCCCCEEEEECCCCCCCH SARTRIISAVDTTATRVVNAVGATGQLDGDKTGQVTATTASMAEPPKAGVGKETVMRMLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH EERRSTSRVWAASLAGVVAFVALVGGAFYWRHLNELGEIREAQARDNARVATEASTNLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH QLGMSAQQIVSRYGDAVLKIYLQWRVFDQETGKPIFHKTVVYDGRTYPAYVRLPGDLGVV HHCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEE RWLTLDDENRSNPSIGEAGEGSGFVVSEQGFILTNKHVAAGWMVPYDASVGQYGIVFDLK EEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEEECCCCCCCCEEEEEECC QPAAFKKRDKATMINLEGASDEASRLRRWVPEAGGVVFHPNVAIPIGSIDGLDSSIAKRV CCCCHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCCCCHHHHHHH FIGRNEYLEARFAGSRLSINATLVRPSSDADAALIKIDSPQPLNKIDISANDELRVGQKV HCCCCCEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCCHHHCHHH IDLGYPAVSVETYTQFTTREAGGPSRVHDELVPQPSVNEGIISALGSASRREGDQTTRSS HHCCCCEEEEEHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCHHHHCC GGDVFQMSINTSGPGNSGGPVFNAEGKVIGLHTYGRKVGDARVTLGVPIRYGRDLLQPQR CCCEEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEECCHHHCHHHHCHHH AAQ HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA