Click here to switch to the map view.

The map label for this gene is prpC [H]

Identifier: 154244946

GI number: 154244946

Start: 1114372

End: 1115289

Strand: Reverse

Name: prpC [H]

Synonym: Xaut_0996

Alternate gene names: 154244946

Gene position: 1115289-1114372 (Counterclockwise)

Preceding gene: 154244947

Following gene: 154244945

Centisome position: 21.01

GC content: 70.7

Gene sequence:

>918_bases
ATGACTGCCCGCGTCGCCAACGCCCGCGTCGATGCTACGCCTGCCCTGCGCGCGCGCGGCGCCATGCTGACCCATGTGGG
CCGGGTGCGCAGCAGCAACGAGGACAGCGTCGTCTTCGTCTCATCCCCGGAGGACGGGCGGCTGGAGGATCGCGGCACGC
TGGCGCTGGTGGCCGACGGCATGGGCGGCCACGCCGCGGGCGAGGTGGCGAGCGCGCTCGCGGCCGAAGTGGTGCGGCGC
ATCTATTGCAGTAGCAGCCTGCCGGTGCCGGAAACCCTGCGCACGGCATTCGAGGCCGCCAATGCGGCGGTGATCCAGCA
CGCGGACGCCCATCCCGAATGCCGCGGCATGGGCACCACCTGCACCGCCGTGGCCATGGTGGGCGGCAAGCTCTATCTCG
CCCATGCGGGGGACAGCCGCGCCTACCTCCTGCGCGGCGAAATACTGACCCAGCTGAGCGAGGACCATTCCCTCAACGCC
CAGCTGGTGCGGGAGGGCGTGATGACGCAGGAAGAGGCTGAGACCAGCCCCAACGGCAATGTCATCGTCAAGGCCCTCGG
CTCGCGGGCGGAACTCGATCCGGCGGTGTGGAGCGAGGGGCTGCCGCTGGCGGACGGCGACCGGGTGCTGCTGTGCTCGG
ACGGGCTGTCGAACCTCGTCCCGGATCGCGAGATCGCTGGCGTGCTGCAGCGCCTGCCCCCCACCGATGCCTGCGACGCA
TTGGTGGAACGGGCGCTCGCAGCAGGGGGCTACGACAACATCTCGGTTGGCGTGTTCGCCATCGAGGTCCCGACGGCGCC
AGATCGCGCTGGTTCGGACCGCTCAAGCGCGGCCCGCACCACGCGGCGCATCGTGCCGCAGGAGATTCTGGCGGAAGGCA
GCGACGCACGAGGAGCCACGCGGCGCATCAAGCTGTGA

Upstream 100 bases:

>100_bases
CGCAAGGTCGGCGATGCGCGGGTAACCCTCGGCGTCCCGATCCGCTACGGCCGCGACCTGCTCCAGCCGCAGCGCGCCGC
GCAGTGACGGGAGGCGCGCC

Downstream 100 bases:

>100_bases
GGGCACCATGACCACGGCGACCACCGAACGCATCGGCCATTACGAAATCACAGCGCTGCTCGGATCGGGCGGTAATGGCC
GCGTCCATGCCGCCCGCGAC

Product: protein phosphatase 2C-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTARVANARVDATPALRARGAMLTHVGRVRSSNEDSVVFVSSPEDGRLEDRGTLALVADGMGGHAAGEVASALAAEVVRR
IYCSSSLPVPETLRTAFEAANAAVIQHADAHPECRGMGTTCTAVAMVGGKLYLAHAGDSRAYLLRGEILTQLSEDHSLNA
QLVREGVMTQEEAETSPNGNVIVKALGSRAELDPAVWSEGLPLADGDRVLLCSDGLSNLVPDREIAGVLQRLPPTDACDA
LVERALAAGGYDNISVGVFAIEVPTAPDRAGSDRSSAARTTRRIVPQEILAEGSDARGATRRIKL

Sequences:

>Translated_305_residues
MTARVANARVDATPALRARGAMLTHVGRVRSSNEDSVVFVSSPEDGRLEDRGTLALVADGMGGHAAGEVASALAAEVVRR
IYCSSSLPVPETLRTAFEAANAAVIQHADAHPECRGMGTTCTAVAMVGGKLYLAHAGDSRAYLLRGEILTQLSEDHSLNA
QLVREGVMTQEEAETSPNGNVIVKALGSRAELDPAVWSEGLPLADGDRVLLCSDGLSNLVPDREIAGVLQRLPPTDACDA
LVERALAAGGYDNISVGVFAIEVPTAPDRAGSDRSSAARTTRRIVPQEILAEGSDARGATRRIKL
>Mature_304_residues
TARVANARVDATPALRARGAMLTHVGRVRSSNEDSVVFVSSPEDGRLEDRGTLALVADGMGGHAAGEVASALAAEVVRRI
YCSSSLPVPETLRTAFEAANAAVIQHADAHPECRGMGTTCTAVAMVGGKLYLAHAGDSRAYLLRGEILTQLSEDHSLNAQ
LVREGVMTQEEAETSPNGNVIVKALGSRAELDPAVWSEGLPLADGDRVLLCSDGLSNLVPDREIAGVLQRLPPTDACDAL
VERALAAGGYDNISVGVFAIEVPTAPDRAGSDRSSAARTTRRIVPQEILAEGSDARGATRRIKL

Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 31939; Mature: 31808

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARVANARVDATPALRARGAMLTHVGRVRSSNEDSVVFVSSPEDGRLEDRGTLALVADG
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECC
MGGHAAGEVASALAAEVVRRIYCSSSLPVPETLRTAFEAANAAVIQHADAHPECRGMGTT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHCCCCCH
CTAVAMVGGKLYLAHAGDSRAYLLRGEILTQLSEDHSLNAQLVREGVMTQEEAETSPNGN
HHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCC
VIVKALGSRAELDPAVWSEGLPLADGDRVLLCSDGLSNLVPDREIAGVLQRLPPTDACDA
EEEEECCCCCCCCHHHHCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHCCCCHHHHH
LVERALAAGGYDNISVGVFAIEVPTAPDRAGSDRSSAARTTRRIVPQEILAEGSDARGAT
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCC
RRIKL
EECCC
>Mature Secondary Structure 
TARVANARVDATPALRARGAMLTHVGRVRSSNEDSVVFVSSPEDGRLEDRGTLALVADG
CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECC
MGGHAAGEVASALAAEVVRRIYCSSSLPVPETLRTAFEAANAAVIQHADAHPECRGMGTT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHCCCCCH
CTAVAMVGGKLYLAHAGDSRAYLLRGEILTQLSEDHSLNAQLVREGVMTQEEAETSPNGN
HHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCC
VIVKALGSRAELDPAVWSEGLPLADGDRVLLCSDGLSNLVPDREIAGVLQRLPPTDACDA
EEEEECCCCCCCCHHHHCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHCCCCHHHHH
LVERALAAGGYDNISVGVFAIEVPTAPDRAGSDRSSAARTTRRIVPQEILAEGSDARGAT
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCC
RRIKL
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]