| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244874
Identifier: 154244874
GI number: 154244874
Start: 1042627
End: 1043706
Strand: Direct
Name: 154244874
Synonym: Xaut_0924
Alternate gene names: NA
Gene position: 1042627-1043706 (Clockwise)
Preceding gene: 154244873
Following gene: 154244875
Centisome position: 19.64
GC content: 66.67
Gene sequence:
>1080_bases ATGGCAGATCCGGAGCAACCCCGGTCCGTTCCCCTTCCTGCCCGCTACAGCGCCGTGCGCCTGAACAGCCCGGAATGGTT CGCGCGGGTCGGCGAGGTGGCCCGCGTGATCGGTTCGGACCGCTTCCACCGCGAGCTGGTGGAACTCGCTGGCGCGGCCA TCAACCACGATGCTTGCTGGATCATCCGCTATTCGCGTGTGGCCCCGCCGGACGTGCTCTACACAAAGGACGTGGCGAGC GACGTGGTGGCGTATTACGCCAATCTCTACTCCTCGGTGGACCCCTTCTTCGAATACTGGCGGAACAACGGCAGTCCCGG CGTCGTGATGCTCAATGACGTGCGATCGCCGGGCCAGTCGTGGGACTTGTACCACAAGGTGTTCCAGACGCTGGCCAGCA TCTCCGACGAGCTGGGCATGTTCTTCTCCACCGTCGGCCACTGCTGCTTCGGCCTGTTCCTGGAGCGCGAGAGGGGGCGC TTCTCCGCGAGCGACATCGAGCGCGCACGGCTCATCTTCCCCATGCTGGAGGGCTTCCACCGCTCGCATCTTGGCGCGCT GTTCAACGACCTGCGCAATCCGCGCGGACCACAGGTGGAGGGCTTCATCACCCGCCCGACGCTCATCGAGGACCGGTTCG GCGTCGATGTCTTCGCCAACGACGCGTGGCGGGAGGCGGCGCGCCGCGCCCCGGCCCTCGCCGATGCGGTAGCCGCGCTC CGTGTCGCGGAGGCAGGGCAGACCCGCGCCGCCGGCGCGCTCACCGTCAAGGTGGAGGTGTTCGACCGCGACTTCCCCCT CGCTCCCGGCGGGCGGATGTATGTGCTCGATGCGCCGGAGCGCGAGGAGGAGGGCGATCCCGATCAATTGCTGGACGAAG CACTCAGCATCTTCACGCCGCGCGAGAAGGAGATCCTGCTGCTGCTCATGAACGGGCAGACCACCGGGGAGATCGCGCAG AAGCTGAGCCTTAGCAAGGGTACCATCAAAAATTGCCGGCTGCGCATGTACCGCAAGACGGGCGTGGGCTCCGAGCGGGC GCTCGTCAAGCACGTCATGCAGTCCATCGGGGCGCGGTAG
Upstream 100 bases:
>100_bases CGCCCGCACGTCCCGCCCGCAATTGCCAAGTGCCGGTGCTTCGGCTTTATTCGCCCCAATACGAATTCCAGATGTGGCGA TACCGTTGGGGCAAGCTGCG
Downstream 100 bases:
>100_bases TAGCCGCTGCGGGGGGAGCGGGGGAAACTTGACTTGCAAGCCGGGGGCGGTTCGGACCGCCGCGAAGCGTGAAATCATGA GGGTCGCGGACGCTGGCACG
Product: response regulator receiver protein
Products: NA
Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Transcriptional Regulator
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MADPEQPRSVPLPARYSAVRLNSPEWFARVGEVARVIGSDRFHRELVELAGAAINHDACWIIRYSRVAPPDVLYTKDVAS DVVAYYANLYSSVDPFFEYWRNNGSPGVVMLNDVRSPGQSWDLYHKVFQTLASISDELGMFFSTVGHCCFGLFLERERGR FSASDIERARLIFPMLEGFHRSHLGALFNDLRNPRGPQVEGFITRPTLIEDRFGVDVFANDAWREAARRAPALADAVAAL RVAEAGQTRAAGALTVKVEVFDRDFPLAPGGRMYVLDAPEREEEGDPDQLLDEALSIFTPREKEILLLLMNGQTTGEIAQ KLSLSKGTIKNCRLRMYRKTGVGSERALVKHVMQSIGAR
Sequences:
>Translated_359_residues MADPEQPRSVPLPARYSAVRLNSPEWFARVGEVARVIGSDRFHRELVELAGAAINHDACWIIRYSRVAPPDVLYTKDVAS DVVAYYANLYSSVDPFFEYWRNNGSPGVVMLNDVRSPGQSWDLYHKVFQTLASISDELGMFFSTVGHCCFGLFLERERGR FSASDIERARLIFPMLEGFHRSHLGALFNDLRNPRGPQVEGFITRPTLIEDRFGVDVFANDAWREAARRAPALADAVAAL RVAEAGQTRAAGALTVKVEVFDRDFPLAPGGRMYVLDAPEREEEGDPDQLLDEALSIFTPREKEILLLLMNGQTTGEIAQ KLSLSKGTIKNCRLRMYRKTGVGSERALVKHVMQSIGAR >Mature_358_residues ADPEQPRSVPLPARYSAVRLNSPEWFARVGEVARVIGSDRFHRELVELAGAAINHDACWIIRYSRVAPPDVLYTKDVASD VVAYYANLYSSVDPFFEYWRNNGSPGVVMLNDVRSPGQSWDLYHKVFQTLASISDELGMFFSTVGHCCFGLFLERERGRF SASDIERARLIFPMLEGFHRSHLGALFNDLRNPRGPQVEGFITRPTLIEDRFGVDVFANDAWREAARRAPALADAVAALR VAEAGQTRAAGALTVKVEVFDRDFPLAPGGRMYVLDAPEREEEGDPDQLLDEALSIFTPREKEILLLLMNGQTTGEIAQK LSLSKGTIKNCRLRMYRKTGVGSERALVKHVMQSIGAR
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40150; Mature: 40019
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPEQPRSVPLPARYSAVRLNSPEWFARVGEVARVIGSDRFHRELVELAGAAINHDACW CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE IIRYSRVAPPDVLYTKDVASDVVAYYANLYSSVDPFFEYWRNNGSPGVVMLNDVRSPGQS EEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC WDLYHKVFQTLASISDELGMFFSTVGHCCFGLFLERERGRFSASDIERARLIFPMLEGFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RSHLGALFNDLRNPRGPQVEGFITRPTLIEDRFGVDVFANDAWREAARRAPALADAVAAL HHHHHHHHHHHCCCCCCCCCEEEECCEEECCCCCCEEECCHHHHHHHHHCCHHHHHHHHH RVAEAGQTRAAGALTVKVEVFDRDFPLAPGGRMYVLDAPEREEEGDPDQLLDEALSIFTP HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC REKEILLLLMNGQTTGEIAQKLSLSKGTIKNCRLRMYRKTGVGSERALVKHVMQSIGAR CCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ADPEQPRSVPLPARYSAVRLNSPEWFARVGEVARVIGSDRFHRELVELAGAAINHDACW CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE IIRYSRVAPPDVLYTKDVASDVVAYYANLYSSVDPFFEYWRNNGSPGVVMLNDVRSPGQS EEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC WDLYHKVFQTLASISDELGMFFSTVGHCCFGLFLERERGRFSASDIERARLIFPMLEGFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RSHLGALFNDLRNPRGPQVEGFITRPTLIEDRFGVDVFANDAWREAARRAPALADAVAAL HHHHHHHHHHHCCCCCCCCCEEEECCEEECCCCCCEEECCHHHHHHHHHCCHHHHHHHHH RVAEAGQTRAAGALTVKVEVFDRDFPLAPGGRMYVLDAPEREEEGDPDQLLDEALSIFTP HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC REKEILLLLMNGQTTGEIAQKLSLSKGTIKNCRLRMYRKTGVGSERALVKHVMQSIGAR CCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA