Click here to switch to the map view.

The map label for this gene is 154244869

Identifier: 154244869

GI number: 154244869

Start: 1036151

End: 1037551

Strand: Direct

Name: 154244869

Synonym: Xaut_0919

Alternate gene names: NA

Gene position: 1036151-1037551 (Clockwise)

Preceding gene: 154244868

Following gene: 154244870

Centisome position: 19.52

GC content: 74.16

Gene sequence:

>1401_bases
ATGGACGCGCCCGCCGACATGGCCGAGCTGACGGGTGCGCTTCTCGCCCGTGGGGATGCCTATCTGGCGCTGCCGGCCTA
CGGCGCCGACGGCGCGCGGGGCGACCGGACGGCGCTGGCGCGGCTGCTGCTGGCCAATGCGCGCCTCAAGCTGGTGTTCG
CCGGGCTGTCCTTTACGCCGCCGGCCTTTCTCGACCTTCTTGCCGGGGAGGAGCGGCCCGCCATCCGCCAGCGCATCGTG
CGCAATCCGGCCACCTCCGGAGAGACGCTGCTGCGCCTCGCCCGCCACATGGAGGGCGCACCCATGCGAGCGGCGGTGGC
GGGCCATGTCCATACGCCGGAGACGGTGCTGGCGGGCCTCGCCGCCGATGCGGATAGCACCGTGCGCGCCGCGCTGCTGC
GCAATCCCGCGACGCCCGCCTCGGCACTCCATGCGGTGCTCGACGGTGCGACCGGAGTGGAGCGCGCCGGACTTGCCCGG
CATCCGCGTGCGGATGGGGACCTGCTGCGCGCCCTTCTCGCCGGCGGGGAAGCCGCCGTCCGCGCGGAGGTGGTGGCTCA
TCCCCATTGCCCGCTCACCCGCGTGGCAGACGCCTGCGTGGATAGTGATGCCGCCATCCGGCGGCGCGCGGCGGCCAATC
CGGCCCTGCCGCCCACCCTGCGGCAGGCGCTGCTGCGCGATCCCGACCCGGCGGTGCGGGCCGAGGCCTTGCGCCGTCTT
GCGGAGCGGCATGACGTGACGCTGGCGGATGATGGCGACGTGCGGGTCCGCCGGGCTCAGGCGCGGCATGAGGCGCTGCC
GCAGGATCTGGCGGAAGCCCTCTCCCGCGATGGGGACGTGTGGGTGCGCACCTGGCTTGCCGGTAATCCCGGCCTTCCGG
CAGCGGTGATCCGTGGTCTCTGCCAGGATGCTCACCCGGGCGTGCGCCATGCCGCCGGCCGCAACCTCCATTGCCCCGCC
GATGCGCTCGCCCGCCTCGCTCGCGATGCCGACGACTGGGTACGCGCCGCCGTTGCCTGCCGCGCCGATCTGCCGTCCGA
CGCCCTGCGCCGGCTGGAGGGGGAGGGGACGGTGGATGTGGCCTCGGCCGTCGCCCGCAATCCGATGGCGCGGGAGGAGG
TGTTGCGCCGCCTCGCCGTGCATTCTGAGGCGGACGTACGCCGTGCCGTGGCGCTCAATCCAGAAGCGCCGGCCTCGGCG
CTCCGGTTGCTGCTGGACGACGCCTACGGGCTCAACCGGGCCTTCGCCGTCCGCCACCCCAACCTGCCGTTCGCGGACGC
CTGGCGGTGCGCCGACGATGGTGAGCCGCAGGTGCGCTTCGCGGTGGGCAAGCGTGCCGTCTTCTCCTGCGCCGCCGCAT
CGCGCGCGGCGCGCACTCCCGAACCCTTCCAACAGCCGTGA

Upstream 100 bases:

>100_bases
GCGCAACTTCCGTGTGCTGGAGCTGACCGAGCTGCTCGCCGAGGCGCTCGAACCGGCGGAACCCGTCGCGCTCGCCGCCC
CCGCAGCGGTCGTCTGAGCG

Downstream 100 bases:

>100_bases
GGACACCCATGAAAATACTCGTGCCGGTGAAACGTGTCGCTTCGCTCGACGACGAGTTCGAGCTTCGCGACGACGGCCGC
GATGTCGATCCCGACTTCTG

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: Leucine Rich Repeat Variant

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MDAPADMAELTGALLARGDAYLALPAYGADGARGDRTALARLLLANARLKLVFAGLSFTPPAFLDLLAGEERPAIRQRIV
RNPATSGETLLRLARHMEGAPMRAAVAGHVHTPETVLAGLAADADSTVRAALLRNPATPASALHAVLDGATGVERAGLAR
HPRADGDLLRALLAGGEAAVRAEVVAHPHCPLTRVADACVDSDAAIRRRAAANPALPPTLRQALLRDPDPAVRAEALRRL
AERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVRTWLAGNPGLPAAVIRGLCQDAHPGVRHAAGRNLHCPA
DALARLARDADDWVRAAVACRADLPSDALRRLEGEGTVDVASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAPASA
LRLLLDDAYGLNRAFAVRHPNLPFADAWRCADDGEPQVRFAVGKRAVFSCAAASRAARTPEPFQQP

Sequences:

>Translated_466_residues
MDAPADMAELTGALLARGDAYLALPAYGADGARGDRTALARLLLANARLKLVFAGLSFTPPAFLDLLAGEERPAIRQRIV
RNPATSGETLLRLARHMEGAPMRAAVAGHVHTPETVLAGLAADADSTVRAALLRNPATPASALHAVLDGATGVERAGLAR
HPRADGDLLRALLAGGEAAVRAEVVAHPHCPLTRVADACVDSDAAIRRRAAANPALPPTLRQALLRDPDPAVRAEALRRL
AERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVRTWLAGNPGLPAAVIRGLCQDAHPGVRHAAGRNLHCPA
DALARLARDADDWVRAAVACRADLPSDALRRLEGEGTVDVASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAPASA
LRLLLDDAYGLNRAFAVRHPNLPFADAWRCADDGEPQVRFAVGKRAVFSCAAASRAARTPEPFQQP
>Mature_466_residues
MDAPADMAELTGALLARGDAYLALPAYGADGARGDRTALARLLLANARLKLVFAGLSFTPPAFLDLLAGEERPAIRQRIV
RNPATSGETLLRLARHMEGAPMRAAVAGHVHTPETVLAGLAADADSTVRAALLRNPATPASALHAVLDGATGVERAGLAR
HPRADGDLLRALLAGGEAAVRAEVVAHPHCPLTRVADACVDSDAAIRRRAAANPALPPTLRQALLRDPDPAVRAEALRRL
AERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVRTWLAGNPGLPAAVIRGLCQDAHPGVRHAAGRNLHCPA
DALARLARDADDWVRAAVACRADLPSDALRRLEGEGTVDVASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAPASA
LRLLLDDAYGLNRAFAVRHPNLPFADAWRCADDGEPQVRFAVGKRAVFSCAAASRAARTPEPFQQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49409; Mature: 49409

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPADMAELTGALLARGDAYLALPAYGADGARGDRTALARLLLANARLKLVFAGLSFTP
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
PAFLDLLAGEERPAIRQRIVRNPATSGETLLRLARHMEGAPMRAAVAGHVHTPETVLAGL
HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHH
AADADSTVRAALLRNPATPASALHAVLDGATGVERAGLARHPRADGDLLRALLAGGEAAV
HCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHH
RAEVVAHPHCPLTRVADACVDSDAAIRRRAAANPALPPTLRQALLRDPDPAVRAEALRRL
HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
AERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVRTWLAGNPGLPAAVIRGL
HHHCCCEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH
CQDAHPGVRHAAGRNLHCPADALARLARDADDWVRAAVACRADLPSDALRRLEGEGTVDV
HHCCCCCHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
ASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAPASALRLLLDDAYGLNRAFAVRHP
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECC
NLPFADAWRCADDGEPQVRFAVGKRAVFSCAAASRAARTPEPFQQP
CCCCHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDAPADMAELTGALLARGDAYLALPAYGADGARGDRTALARLLLANARLKLVFAGLSFTP
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
PAFLDLLAGEERPAIRQRIVRNPATSGETLLRLARHMEGAPMRAAVAGHVHTPETVLAGL
HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHH
AADADSTVRAALLRNPATPASALHAVLDGATGVERAGLARHPRADGDLLRALLAGGEAAV
HCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHH
RAEVVAHPHCPLTRVADACVDSDAAIRRRAAANPALPPTLRQALLRDPDPAVRAEALRRL
HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
AERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVRTWLAGNPGLPAAVIRGL
HHHCCCEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH
CQDAHPGVRHAAGRNLHCPADALARLARDADDWVRAAVACRADLPSDALRRLEGEGTVDV
HHCCCCCHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
ASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAPASALRLLLDDAYGLNRAFAVRHP
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECC
NLPFADAWRCADDGEPQVRFAVGKRAVFSCAAASRAARTPEPFQQP
CCCCHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA