| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is paaK [H]
Identifier: 154244851
GI number: 154244851
Start: 1003322
End: 1004659
Strand: Reverse
Name: paaK [H]
Synonym: Xaut_0901
Alternate gene names: 154244851
Gene position: 1004659-1003322 (Counterclockwise)
Preceding gene: 154244852
Following gene: 154244843
Centisome position: 18.92
GC content: 67.79
Gene sequence:
>1338_bases ATGAACATGGCTCTGCCGGCGGTTTCCTTTGGCCGGACCTTCGAGGCCGGCCTTGATACAGCGGAACGGGCATCGCGGGA CGAAATCATGTCCCTCCAGCGCGAGCGTCTCGCTTGGTCGCTGCGCCACGCCTATGAGAACGTGCCGTTCTACCGCAGGA AGTTCGACGAGGCGGGGGTGCACCCCTCCGACCTGCGCGACCTATCGGACCTCGCCAAGTTCCCCTTCACGGTGAAGACC GACCTGCGCGACAACTACCCCTTCGGCCTGTTCGCGGTGCCGCGCGAGAAGCTGCTGCGGGTGCACGGCTCCTCCGGCAC CACGGGCAAGCCCATCGTGGTGGGCTATACCCGCGCCGACATCGACATGTGGGCCGACGTGATGGCCCGCTCCATCCGCG CGGCCGGGGTGCGGCCGGGCATGATGGTGCACGTGGCCTATGGCTACGGCCTGTTCACCGGCGGCCTGGGCGCCCATTAC GGCGTGGAGCGGCTCGGCTGCACCGTGGTGCCCATGTCCGGCGGCATGACCGAGCGTCAGGTGCAGCTCATCCACGACTT CAAGCCAGACGCCATCATGGTGACGCCCAGCTACATGCTGGCGCTGCTGGACGGCTTCGCCAAGGCGGGGCTGGACCCGC GCGCCTCCTCGCTGAAGTACGGCATCTTCGGCGCCGAGCCCTGGACCAACGCCATGCGCGAGGAGATCGAGCGCGACTTC GCCATCGACGCCACCGACATCTACGGCCTCTCCGAGGTCATCGGCCCCGGCGTGGCGCAGGAATGCGTGGAGACCAAGGA CGGCCTGCACATCTGGGAAGACCACTTCCTGCCGGAGGTGATCGACCCCATCACCGGCGAGGTGCTGCCGGACGGGGAGA AGGGCGAGCTGGTGTTCACCTCCCTCACCAAGGAGGCGTTCCCGATCATCCGCTACCGCACCCGCGACCTCACCCGCCTT CTGCCCGGCACGGCGCGGCCCGGCATGCGGCGCATGGAGAAGGTCACCGGCCGTTCGGACGACATGATCATCCTGCGGGG GGTGAACGTGTTCCCCACCCAGATCGAGGAGATCCTGCTCTCCATCGAGACCTGCTCTGGCCACTACCAGCTGGAGCTGA CCCGCGAGGGCCGCATGGACGAGATGACCGTGCATGCGGAGATCCGCGAGGAGGCCCAGGGCAGCACCGACATTGAGGCC TGCGCGGCACACATCCTCGCCCGCATCAAGGACACGGTGGGCATCACCACCCGCATCGAGCTGCACGAGCCCGGCGGCAT CGAGCGCACCGCCACCGGCAAGGCCAAGCGCATCATAGACCGCCGCCCCAAGGGGTGA
Upstream 100 bases:
>100_bases TCGCGGGCATTCTCGCACCATCGGCGGGGCGTTGATCGCCCCGCCCCCAAGCGCGCCGGAGAGCCGCGACCACACGACCA CAGCTTGAGTGGAGGAGACG
Downstream 100 bases:
>100_bases GCTTTCCAGGATCCTCCCGACGGCGGGTTCGCCCGCCGTCACCCCCAGAAGAAAAAGGCCCGGCGCAAGCCGGGCCTTTT TCTTTGCAGCCAAGAGACGG
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNMALPAVSFGRTFEAGLDTAERASRDEIMSLQRERLAWSLRHAYENVPFYRRKFDEAGVHPSDLRDLSDLAKFPFTVKT DLRDNYPFGLFAVPREKLLRVHGSSGTTGKPIVVGYTRADIDMWADVMARSIRAAGVRPGMMVHVAYGYGLFTGGLGAHY GVERLGCTVVPMSGGMTERQVQLIHDFKPDAIMVTPSYMLALLDGFAKAGLDPRASSLKYGIFGAEPWTNAMREEIERDF AIDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFLPEVIDPITGEVLPDGEKGELVFTSLTKEAFPIIRYRTRDLTRL LPGTARPGMRRMEKVTGRSDDMIILRGVNVFPTQIEEILLSIETCSGHYQLELTREGRMDEMTVHAEIREEAQGSTDIEA CAAHILARIKDTVGITTRIELHEPGGIERTATGKAKRIIDRRPKG
Sequences:
>Translated_445_residues MNMALPAVSFGRTFEAGLDTAERASRDEIMSLQRERLAWSLRHAYENVPFYRRKFDEAGVHPSDLRDLSDLAKFPFTVKT DLRDNYPFGLFAVPREKLLRVHGSSGTTGKPIVVGYTRADIDMWADVMARSIRAAGVRPGMMVHVAYGYGLFTGGLGAHY GVERLGCTVVPMSGGMTERQVQLIHDFKPDAIMVTPSYMLALLDGFAKAGLDPRASSLKYGIFGAEPWTNAMREEIERDF AIDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFLPEVIDPITGEVLPDGEKGELVFTSLTKEAFPIIRYRTRDLTRL LPGTARPGMRRMEKVTGRSDDMIILRGVNVFPTQIEEILLSIETCSGHYQLELTREGRMDEMTVHAEIREEAQGSTDIEA CAAHILARIKDTVGITTRIELHEPGGIERTATGKAKRIIDRRPKG >Mature_445_residues MNMALPAVSFGRTFEAGLDTAERASRDEIMSLQRERLAWSLRHAYENVPFYRRKFDEAGVHPSDLRDLSDLAKFPFTVKT DLRDNYPFGLFAVPREKLLRVHGSSGTTGKPIVVGYTRADIDMWADVMARSIRAAGVRPGMMVHVAYGYGLFTGGLGAHY GVERLGCTVVPMSGGMTERQVQLIHDFKPDAIMVTPSYMLALLDGFAKAGLDPRASSLKYGIFGAEPWTNAMREEIERDF AIDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFLPEVIDPITGEVLPDGEKGELVFTSLTKEAFPIIRYRTRDLTRL LPGTARPGMRRMEKVTGRSDDMIILRGVNVFPTQIEEILLSIETCSGHYQLELTREGRMDEMTVHAEIREEAQGSTDIEA CAAHILARIKDTVGITTRIELHEPGGIERTATGKAKRIIDRRPKG
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=428, Percent_Identity=61.9158878504673, Blast_Score=541, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 49513; Mature: 49513
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMALPAVSFGRTFEAGLDTAERASRDEIMSLQRERLAWSLRHAYENVPFYRRKFDEAGV CCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC HPSDLRDLSDLAKFPFTVKTDLRDNYPFGLFAVPREKLLRVHGSSGTTGKPIVVGYTRAD CHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHHHEEECCCCCCCCCEEEEEECCC IDMWADVMARSIRAAGVRPGMMVHVAYGYGLFTGGLGAHYGVERLGCTVVPMSGGMTERQ HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCHHCCHHHHCEEEEECCCCCCHHH VQLIHDFKPDAIMVTPSYMLALLDGFAKAGLDPRASSLKYGIFGAEPWTNAMREEIERDF HHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHC AIDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFLPEVIDPITGEVLPDGEKGELVFT CCCCHHHCCHHHHHCCCHHHHHHHCCCCCEEHHHCCCHHHHCCCCCCCCCCCCCCCEEEE SLTKEAFPIIRYRTRDLTRLLPGTARPGMRRMEKVTGRSDDMIILRGVNVFPTQIEEILL EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH SIETCSGHYQLELTREGRMDEMTVHAEIREEAQGSTDIEACAAHILARIKDTVGITTRIE HHHCCCCEEEEEEECCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEE LHEPGGIERTATGKAKRIIDRRPKG EECCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MNMALPAVSFGRTFEAGLDTAERASRDEIMSLQRERLAWSLRHAYENVPFYRRKFDEAGV CCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC HPSDLRDLSDLAKFPFTVKTDLRDNYPFGLFAVPREKLLRVHGSSGTTGKPIVVGYTRAD CHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHHHEEECCCCCCCCCEEEEEECCC IDMWADVMARSIRAAGVRPGMMVHVAYGYGLFTGGLGAHYGVERLGCTVVPMSGGMTERQ HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCHHCCHHHHCEEEEECCCCCCHHH VQLIHDFKPDAIMVTPSYMLALLDGFAKAGLDPRASSLKYGIFGAEPWTNAMREEIERDF HHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHC AIDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFLPEVIDPITGEVLPDGEKGELVFT CCCCHHHCCHHHHHCCCHHHHHHHCCCCCEEHHHCCCHHHHCCCCCCCCCCCCCCCEEEE SLTKEAFPIIRYRTRDLTRLLPGTARPGMRRMEKVTGRSDDMIILRGVNVFPTQIEEILL EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH SIETCSGHYQLELTREGRMDEMTVHAEIREEAQGSTDIEACAAHILARIKDTVGITTRIE HHHCCCCEEEEEEECCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEE LHEPGGIERTATGKAKRIIDRRPKG EECCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]