| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is braC [H]
Identifier: 154244843
GI number: 154244843
Start: 995886
End: 997076
Strand: Reverse
Name: braC [H]
Synonym: Xaut_0893
Alternate gene names: 154244843
Gene position: 997076-995886 (Counterclockwise)
Preceding gene: 154244851
Following gene: 154244842
Centisome position: 18.78
GC content: 68.09
Gene sequence:
>1191_bases ATGGATACGACCGCTCGCCTGCGGCCGGTGCTGCGCGCCGCCCTCGCCTTCGCAAGCTTCGCCCTCGCCCCCTTCGCGCC GCTGGCCGCCGCGCCCGCCCTGGCCGCAGACCCCATCAAGATCGGTTCGGTCGTGTCCGCCACCGGCCCGTCCGCCTTCC TCGGCGACCCCGAGGCCAAGACCCTGAAGCTCTATGTGGAGGAGCTGAACAAGAAGGGCGGGCTGCTCGGCCGCCCGGTG GAGCTGGTGCTCTACGACGACGGCGGCGACGCCAACAAGGCGCGCACCTTCGCCACCCGTCTGGTGGAAGACGACAAGGT GGTGGCCATGGTGGGCGGCACCTCCACCGGCGCCACCATGGCCATGATCCCGGTGTTCGAGGAGGCCGGCATCCCCTTCG TGTCGCTGGCCGGCGGCATCGAGATCATCGAGCCGGTGCGCGCCTTCGTCTTCAAGACGCCCCACACCGACAAGACCGCC TGCCAGAAGATCTTCGAGGACATGAAGGCACGCGGCATCACGAAGATCGGCATGATCTCGGGCACCGACGGCTTCGGCAA GTCCATGCGCAACCAATGCCTGAAGGTGGTGGGCGGCTACAACATCACCGTGCTCGCCGACGAGACCTACGGCGCCACCG ATTCCGACATGACGCCCCAGCTCAACAAGATCAAGAACACTGCCGGCGTCGAGGCGGTGCTCAATCCCGGCTTCGGCCAG GGACCGGCCATCGTGACCCGCAACTATGCCCAGCTCGGCCTCAAGCTGCCGCTGTACCAGAGCCACGGCGTCGCCTCCAA GAGCTTCATCGAGCTGGCGGGACCGGCGGCGGAAGGCGTGCGGCTGCCTGCCCCCGCCATCCTCGTTGGCGACAAGCTCG CGGCGGAGGACCCCCAGAAAGCGGTGGTCGCCGGCTACAAGGCGTCCTACGAGAAGGCCACGGGCCAGAGCGTCTCCACC TTCGGCGGCTACGGCTTCGACGGCATCCAGCTGGTGACGCAGGCCATCGACAAGGCCAAGTCCGCCGAGCCGAAGAAGAT CCGCGACGCGCTGGAAGCCACCAAGTCCTATGTGGGCGTGACCGGCGTCTACAGCTTCTCGCCCACCGACCACCTGGGCC TCGGCACGGACTCGTTCCGCATGCTGGAGATCCGTGGCGGCGACTGGACGCTGGACGCCGCCACGCGCTGA
Upstream 100 bases:
>100_bases TCAATTATATAGTTCCCCTACCGTCGGCTCAATGGCGCGGCGGCTGGAGGCGGGCAAACCCGCTCCTTGGCCCGAAACGG ACCTTTTGGAGAAACGCTTC
Downstream 100 bases:
>100_bases GGCGCCCCTTAACCCCTGCCCCCGAAACAGGGCGGCGCCGCGCGCGCCGTCCGAGCGATGGCGCTAAAGGCCAGGCCCGA CCATGTCCGAATTTCTCCAG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MDTTARLRPVLRAALAFASFALAPFAPLAAAPALAADPIKIGSVVSATGPSAFLGDPEAKTLKLYVEELNKKGGLLGRPV ELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVFEEAGIPFVSLAGGIEIIEPVRAFVFKTPHTDKTA CQKIFEDMKARGITKIGMISGTDGFGKSMRNQCLKVVGGYNITVLADETYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQ GPAIVTRNYAQLGLKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILVGDKLAAEDPQKAVVAGYKASYEKATGQSVST FGGYGFDGIQLVTQAIDKAKSAEPKKIRDALEATKSYVGVTGVYSFSPTDHLGLGTDSFRMLEIRGGDWTLDAATR
Sequences:
>Translated_396_residues MDTTARLRPVLRAALAFASFALAPFAPLAAAPALAADPIKIGSVVSATGPSAFLGDPEAKTLKLYVEELNKKGGLLGRPV ELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVFEEAGIPFVSLAGGIEIIEPVRAFVFKTPHTDKTA CQKIFEDMKARGITKIGMISGTDGFGKSMRNQCLKVVGGYNITVLADETYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQ GPAIVTRNYAQLGLKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILVGDKLAAEDPQKAVVAGYKASYEKATGQSVST FGGYGFDGIQLVTQAIDKAKSAEPKKIRDALEATKSYVGVTGVYSFSPTDHLGLGTDSFRMLEIRGGDWTLDAATR >Mature_396_residues MDTTARLRPVLRAALAFASFALAPFAPLAAAPALAADPIKIGSVVSATGPSAFLGDPEAKTLKLYVEELNKKGGLLGRPV ELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVFEEAGIPFVSLAGGIEIIEPVRAFVFKTPHTDKTA CQKIFEDMKARGITKIGMISGTDGFGKSMRNQCLKVVGGYNITVLADETYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQ GPAIVTRNYAQLGLKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILVGDKLAAEDPQKAVVAGYKASYEKATGQSVST FGGYGFDGIQLVTQAIDKAKSAEPKKIRDALEATKSYVGVTGVYSFSPTDHLGLGTDSFRMLEIRGGDWTLDAATR
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=339, Percent_Identity=24.188790560472, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994941, Length=312, Percent_Identity=24.6794871794872, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41513; Mature: 41513
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTARLRPVLRAALAFASFALAPFAPLAAAPALAADPIKIGSVVSATGPSAFLGDPEAK CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCEEECCCCCCCCCCCCHH TLKLYVEELNKKGGLLGRPVELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATM HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEE AMIPVFEEAGIPFVSLAGGIEIIEPVRAFVFKTPHTDKTACQKIFEDMKARGITKIGMIS EEEEEHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE GTDGFGKSMRNQCLKVVGGYNITVLADETYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQ CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCC GPAIVTRNYAQLGLKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILVGDKLAAEDPQK CCEEEECCHHHHCEECCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCCH AVVAGYKASYEKATGQSVSTFGGYGFDGIQLVTQAIDKAKSAEPKKIRDALEATKSYVGV HHHHCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCE TGVYSFSPTDHLGLGTDSFRMLEIRGGDWTLDAATR EEEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCC >Mature Secondary Structure MDTTARLRPVLRAALAFASFALAPFAPLAAAPALAADPIKIGSVVSATGPSAFLGDPEAK CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCEEECCCCCCCCCCCCHH TLKLYVEELNKKGGLLGRPVELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATM HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEE AMIPVFEEAGIPFVSLAGGIEIIEPVRAFVFKTPHTDKTACQKIFEDMKARGITKIGMIS EEEEEHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE GTDGFGKSMRNQCLKVVGGYNITVLADETYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQ CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCC GPAIVTRNYAQLGLKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILVGDKLAAEDPQK CCEEEECCHHHHCEECCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCCH AVVAGYKASYEKATGQSVSTFGGYGFDGIQLVTQAIDKAKSAEPKKIRDALEATKSYVGV HHHHCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCE TGVYSFSPTDHLGLGTDSFRMLEIRGGDWTLDAATR EEEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]