| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fdoG [H]
Identifier: 154244614
GI number: 154244614
Start: 746483
End: 747082
Strand: Reverse
Name: fdoG [H]
Synonym: Xaut_0663
Alternate gene names: 154244614
Gene position: 747082-746483 (Counterclockwise)
Preceding gene: 154244619
Following gene: 154244613
Centisome position: 14.07
GC content: 63.0
Gene sequence:
>600_bases ATGAACATGGAGCTTTCGCGCCGCCAGTTCTTGAAAACGGCGGGCGCGGGCGTGGCGGCGACAACCCTTGGGGCGATGGG CTTCGGCGCCATCGAGGAGGCCTATGCCTCCACCATCAAGCCGTTCCGCCTCGTCAACACCACGGAAGTGCGCAACACTT GCACCTATTGCTCGGTGGCATGCGGCATCCTGATCTTTTCCAAGGGTAATCTCGCCAAGGGCGAGAAGGCCGACATCACC CACATCGAGGGTGACAGCGACCATCCCACCAATCGCGGGACGCTCTGCCCCAAGGGCGCGGCCCTGCTCGACATCGTCAA ATCCGCGACGCGCCTCAAGGAGCCGATGATCCGGCGCGCGGGATCCGACAAGTTCGAGAAGATTTCCTGGAATGAGGCGC TCGACAAGATCGCCCGGGCAATGAAGACGGATCGCGACGCGAACTTCATCGCCAAGAACCAGGACGGCGTGACGGTGAAC CGCTGGCTCACCACCGGCTTCCTCGCCGCCTCCGCCACCACCAACGAAACCGCGTTCGCCACCTACAAGGTGGTGCGCTC GACCGGAATTCTGGCGTTCGACAACCAGGCACGCGTCTGA
Upstream 100 bases:
>100_bases AAATAGCGTCCCAAGCTGTGGAATGCGGTATTTGGCAGCCTCCTGGAGCTGCCCTCAACGGTCCCCGGTGCGGGGCGCAG AAGGTCGGAGGTTTCCTTCG
Downstream 100 bases:
>100_bases CACGGCCCGACGGTGGCGAGTCTCGCCCCAACTTTTGGCCGTGGAGCAATGACCAACTCCTGGACGGACATCAAGAATAC CGATCTCGTGGTGATCATGG
Product: molybdopterin oxidoreductase Fe4S4 region
Products: NA
Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNMELSRRQFLKTAGAGVAATTLGAMGFGAIEEAYASTIKPFRLVNTTEVRNTCTYCSVACGILIFSKGNLAKGEKADIT HIEGDSDHPTNRGTLCPKGAALLDIVKSATRLKEPMIRRAGSDKFEKISWNEALDKIARAMKTDRDANFIAKNQDGVTVN RWLTTGFLAASATTNETAFATYKVVRSTGILAFDNQARV
Sequences:
>Translated_199_residues MNMELSRRQFLKTAGAGVAATTLGAMGFGAIEEAYASTIKPFRLVNTTEVRNTCTYCSVACGILIFSKGNLAKGEKADIT HIEGDSDHPTNRGTLCPKGAALLDIVKSATRLKEPMIRRAGSDKFEKISWNEALDKIARAMKTDRDANFIAKNQDGVTVN RWLTTGFLAASATTNETAFATYKVVRSTGILAFDNQARV >Mature_199_residues MNMELSRRQFLKTAGAGVAATTLGAMGFGAIEEAYASTIKPFRLVNTTEVRNTCTYCSVACGILIFSKGNLAKGEKADIT HIEGDSDHPTNRGTLCPKGAALLDIVKSATRLKEPMIRRAGSDKFEKISWNEALDKIARAMKTDRDANFIAKNQDGVTVN RWLTTGFLAASATTNETAFATYKVVRSTGILAFDNQARV
Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868720, Length=197, Percent_Identity=58.8832487309645, Blast_Score=242, Evalue=1e-65, Organism=Escherichia coli, GI3868719, Length=197, Percent_Identity=56.8527918781726, Blast_Score=235, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 21545; Mature: 21545
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMELSRRQFLKTAGAGVAATTLGAMGFGAIEEAYASTIKPFRLVNTTEVRNTCTYCSVA CCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH CGILIFSKGNLAKGEKADITHIEGDSDHPTNRGTLCPKGAALLDIVKSATRLKEPMIRRA HCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GSDKFEKISWNEALDKIARAMKTDRDANFIAKNQDGVTVNRWLTTGFLAASATTNETAFA CCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHEECCCCCCHHHH TYKVVRSTGILAFDNQARV HHHHHHHCCEEEECCCCCC >Mature Secondary Structure MNMELSRRQFLKTAGAGVAATTLGAMGFGAIEEAYASTIKPFRLVNTTEVRNTCTYCSVA CCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH CGILIFSKGNLAKGEKADITHIEGDSDHPTNRGTLCPKGAALLDIVKSATRLKEPMIRRA HCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GSDKFEKISWNEALDKIARAMKTDRDANFIAKNQDGVTVNRWLTTGFLAASATTNETAFA CCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHEECCCCCCHHHH TYKVVRSTGILAFDNQARV HHHHHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503; 8522521 [H]