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The map label for this gene is trbI [H]

Identifier: 154244559

GI number: 154244559

Start: 677235

End: 678482

Strand: Direct

Name: trbI [H]

Synonym: Xaut_0604

Alternate gene names: 154244559

Gene position: 677235-678482 (Clockwise)

Preceding gene: 154244558

Following gene: 154244560

Centisome position: 12.76

GC content: 67.71

Gene sequence:

>1248_bases
ATGAACGGCATGGACCCCGGAAAGAAGAAAGGGCTGGGTTCGGCTGGCGATGGCGGCTCCCCGCCGCTGACGGGGGAGGC
TACGGCGGCCATGCGGTTGCGGCCGGAGCCGCCCCGGGTGACACGCCTGTCGCGCAAGGTACTGGCCGGGCTGGGGCTCG
TCGCTGGCCTCGGGATCGGCGGAGCGCTGATCTTCGCTCTCCAGACGCGAAAGGACCACGGTCTGGGCCAGGAACTCTAC
GCCACCGACATCAAGGCGACGCCGGACGGACTTGCCGGCTTGCCGAAGGACTATACCGGCATCCCTAAGCTCGGGCCTCC
GCTGCCCGGCGACCTCGGCCGGCCCATCCTCAATGCGCAGACGGTAGCGCAGCCGCCACTGCCGTCAATGGCTGGCATGC
CTAATCCCGCTCTGAGCCCTGAGGAGCAGCGCCAGCAGCAGGAGAGCGAGGCCGCGCGGACCGGGCGGCTGTTCGCCCAA
ACCATCACGCGGCCGGCAAGCTCTGTCGTGGCGCAACAGGTGGGCGCAGCGTCTATTACGACGGCGGCACCTGTCCCGGA
TCTGACTTCCCTCGGCCTCGCCCCGCCGGCGGCAACACCCACGGCCCAGGAGCGGCAGGTAGCCTTCCTCAACCTGGCCG
TCGACCGCCGCACCGTGTCCCCTGACCGTGTGGCGGCGCCCGCTTCAGTCAACATCCTGCAGGCGGGCGCCGTCATCCCC
GCTGCGCTGATCACCGGCATCCGCTCCGACCTACCGGGTCAAATCACCGCCCAGGTGACCGAGAATGTCCATGACAGCCC
GACCGGCCGGATTCTCCTGATCCCCCAGGGCACGCGCATCATCGGTCAGTACGACAACGGCGTCGGCTTCGGGCAGCGAC
GGATTCTTCTGGTTTGGAACCGGCTGATCTTCCCCAATGGCCGCTCCATCGTGCTGGAGCGCCAGCCTGGAGCCGATGCC
GAAGGCTATGCCGGTCTCGAAGATGGTGTCGACTATCACTGGGGCGAGCTCTTCAAGACCGCGGTGCTCTCCACCATCCT
GAGCGTCGGGGCGAGCGCCGGTTCATCCGGCAGCAACAGCGACCTTGCGAGCGCTCTGCGGGAAGGGGCTTCCGACAGTA
TCAGCCAGACCGGACGCCAGATCGTCCAGCGTCAGCTCAACATCGCGCCGACGCTCACGATACGGCCGGGATACCCGGTG
CGGGTCATCGTCACGCGCGACCTCGTTCTCGAACCCTATGGAGGCTGA

Upstream 100 bases:

>100_bases
TGATCGTGGACCGGCTGTTCGCGGCGGCCGAGCTGCGCTTCGGTGCCGACAAGGATCAGAAGCGCGTGCGCATCTCCCGC
ACCAACGGGAGGTCGGTCCT

Downstream 100 bases:

>100_bases
CATGCCGAAGCTGAAGCTCAGCGAGATCCTCGACGAGAAGCCGGTGAAGGTGACCGTCGAACTGCCGGCGAAGCTGCATC
GCGATCTTGTCGCCTATGCA

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNGMDPGKKKGLGSAGDGGSPPLTGEATAAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIFALQTRKDHGLGQELY
ATDIKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTVAQPPLPSMAGMPNPALSPEEQRQQQESEAARTGRLFAQ
TITRPASSVVAQQVGAASITTAAPVPDLTSLGLAPPAATPTAQERQVAFLNLAVDRRTVSPDRVAAPASVNILQAGAVIP
AALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRILLVWNRLIFPNGRSIVLERQPGADA
EGYAGLEDGVDYHWGELFKTAVLSTILSVGASAGSSGSNSDLASALREGASDSISQTGRQIVQRQLNIAPTLTIRPGYPV
RVIVTRDLVLEPYGG

Sequences:

>Translated_415_residues
MNGMDPGKKKGLGSAGDGGSPPLTGEATAAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIFALQTRKDHGLGQELY
ATDIKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTVAQPPLPSMAGMPNPALSPEEQRQQQESEAARTGRLFAQ
TITRPASSVVAQQVGAASITTAAPVPDLTSLGLAPPAATPTAQERQVAFLNLAVDRRTVSPDRVAAPASVNILQAGAVIP
AALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRILLVWNRLIFPNGRSIVLERQPGADA
EGYAGLEDGVDYHWGELFKTAVLSTILSVGASAGSSGSNSDLASALREGASDSISQTGRQIVQRQLNIAPTLTIRPGYPV
RVIVTRDLVLEPYGG
>Mature_415_residues
MNGMDPGKKKGLGSAGDGGSPPLTGEATAAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIFALQTRKDHGLGQELY
ATDIKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTVAQPPLPSMAGMPNPALSPEEQRQQQESEAARTGRLFAQ
TITRPASSVVAQQVGAASITTAAPVPDLTSLGLAPPAATPTAQERQVAFLNLAVDRRTVSPDRVAAPASVNILQAGAVIP
AALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRILLVWNRLIFPNGRSIVLERQPGADA
EGYAGLEDGVDYHWGELFKTAVLSTILSVGASAGSSGSNSDLASALREGASDSISQTGRQIVQRQLNIAPTLTIRPGYPV
RVIVTRDLVLEPYGG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 43114; Mature: 43114

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGMDPGKKKGLGSAGDGGSPPLTGEATAAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIG
CCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
GALIFALQTRKDHGLGQELYATDIKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQ
CEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCH
TVAQPPLPSMAGMPNPALSPEEQRQQQESEAARTGRLFAQTITRPASSVVAQQVGAASIT
HCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TAAPVPDLTSLGLAPPAATPTAQERQVAFLNLAVDRRTVSPDRVAAPASVNILQAGAVIP
CCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCCCCCCEEECCCHHHH
AALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRILLVWN
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEH
RLIFPNGRSIVLERQPGADAEGYAGLEDGVDYHWGELFKTAVLSTILSVGASAGSSGSNS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DLASALREGASDSISQTGRQIVQRQLNIAPTLTIRPGYPVRVIVTRDLVLEPYGG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEECCCCC
>Mature Secondary Structure
MNGMDPGKKKGLGSAGDGGSPPLTGEATAAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIG
CCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
GALIFALQTRKDHGLGQELYATDIKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQ
CEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCH
TVAQPPLPSMAGMPNPALSPEEQRQQQESEAARTGRLFAQTITRPASSVVAQQVGAASIT
HCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TAAPVPDLTSLGLAPPAATPTAQERQVAFLNLAVDRRTVSPDRVAAPASVNILQAGAVIP
CCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCCCCCCEEECCCHHHH
AALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRILLVWN
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEH
RLIFPNGRSIVLERQPGADAEGYAGLEDGVDYHWGELFKTAVLSTILSVGASAGSSGSNS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DLASALREGASDSISQTGRQIVQRQLNIAPTLTIRPGYPVRVIVTRDLVLEPYGG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]