Click here to switch to the map view.

The map label for this gene is 154244545

Identifier: 154244545

GI number: 154244545

Start: 662212

End: 662640

Strand: Direct

Name: 154244545

Synonym: Xaut_0590

Alternate gene names: NA

Gene position: 662212-662640 (Clockwise)

Preceding gene: 154244544

Following gene: 154244546

Centisome position: 12.47

GC content: 68.76

Gene sequence:

>429_bases
ATGACCCCACGCAAGAAGAAGGCTCAGATCTCGGTCTATCTGGATCCCGCGACGATGGGGCTGCTGGCCGACTATGCCGC
GCGGCGCGGCCAGCCTCAGTCCCTGATCGCCGAGGCAGCCATCGCGTCCTTCCTGTCGCCGGACGCCGCGGAGCAGCGGG
AAGCTGCAATCGCCAAGCGCCTCGATCAGTTGGACCGACGGATGGCCCGGCTGGAGCGGGACCTCGGCATCTCGGTCGAG
ACGCTGGCAGTGTTCGTGCGGTTCTGGCTGGCCACCACGCCGGCATTGCCGGAGCCGGCGGCCCAGGCAGCCCGAGCCAA
GGCGGGGGAGCGATATGAGGCGTTCGTCGCGGCGCTGGGGCGCCGGCTCGCGAAGGGGCCGAGGCTGGCGCATGAGGTTT
CTGAGGACAGCGGCGCTTATAAAACGTGA

Upstream 100 bases:

>100_bases
AAGACGACGTGGCCCGGACCAGTCGCATGACGGGCGTCATGCAGGGCGTCGCGCGTCAGGTCTCGCTCGATCCCAATGAT
GGCATGGAGCTGTGATAGCG

Downstream 100 bases:

>100_bases
GAAAGGGGCCATCCGCCAGATACAGACATTGGCAAGGTGTTCGCAGCCGGACGTTGTGGGTCGATCCAATCGAGCGCAAC
CGCACGTTCGTCCACGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; CopG Family Protein; Ribbon-Helix-Helix Harboring Protein; Helix-Turn-Helix Protein CopG Family; Helix-Turn-Helix Protein Of CopG Family; CopG-Family Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTPRKKKAQISVYLDPATMGLLADYAARRGQPQSLIAEAAIASFLSPDAAEQREAAIAKRLDQLDRRMARLERDLGISVE
TLAVFVRFWLATTPALPEPAAQAARAKAGERYEAFVAALGRRLAKGPRLAHEVSEDSGAYKT

Sequences:

>Translated_142_residues
MTPRKKKAQISVYLDPATMGLLADYAARRGQPQSLIAEAAIASFLSPDAAEQREAAIAKRLDQLDRRMARLERDLGISVE
TLAVFVRFWLATTPALPEPAAQAARAKAGERYEAFVAALGRRLAKGPRLAHEVSEDSGAYKT
>Mature_141_residues
TPRKKKAQISVYLDPATMGLLADYAARRGQPQSLIAEAAIASFLSPDAAEQREAAIAKRLDQLDRRMARLERDLGISVET
LAVFVRFWLATTPALPEPAAQAARAKAGERYEAFVAALGRRLAKGPRLAHEVSEDSGAYKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15465; Mature: 15334

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRKKKAQISVYLDPATMGLLADYAARRGQPQSLIAEAAIASFLSPDAAEQREAAIAKR
CCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LDQLDRRMARLERDLGISVETLAVFVRFWLATTPALPEPAAQAARAKAGERYEAFVAALG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH
RRLAKGPRLAHEVSEDSGAYKT
HHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TPRKKKAQISVYLDPATMGLLADYAARRGQPQSLIAEAAIASFLSPDAAEQREAAIAKR
CCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LDQLDRRMARLERDLGISVETLAVFVRFWLATTPALPEPAAQAARAKAGERYEAFVAALG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH
RRLAKGPRLAHEVSEDSGAYKT
HHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA