Click here to switch to the map view.

The map label for this gene is 154244543

Identifier: 154244543

GI number: 154244543

Start: 658464

End: 660203

Strand: Direct

Name: 154244543

Synonym: Xaut_0588

Alternate gene names: NA

Gene position: 658464-660203 (Clockwise)

Preceding gene: 154244542

Following gene: 154244544

Centisome position: 12.4

GC content: 70.75

Gene sequence:

>1740_bases
ATGGCCGATGACCGGGAATTCCGCGTCCGACCGGGTCGTATCCGCTCGACCCGCGCCCAGCGCGCCCGCCCCTTCATCGC
CCAGGCCCTCGCGGCGGCCCAGAAGGCCGGCGGGCACGTGTCTCGATCCGGCCGCATCTCCTCCGGTGCCCGCTCGCGAT
TCGGCCGGGGCAGGGCGGCGAGCATCGTCGCCAATCGCCTGCTCACTGGGCGCTCACGCGTCGTCGTCATCAAGACCCGC
GTGGTTCGGCACACGGCGCGGGCAGCACCGCTGACCGCGCACCTCAGCTACCTGCGCCGGGAGGGCGTGACCCGGGACGG
GGAGAAGGCGCGCCTGTTCGGGCCGGGCACCGAGGAGGGGGACGGCCGCGCCTTCGCCGAGCGATGCGCCGACGATCGGC
ACCACTTCCGCTTCATCGTGTCTCCCGAGGATGCGGCGGACATGGCCGACCTCCGGTCCTTCGCCGACGACCTCGTGGGG
CGGATGGAGAAGGACCTCGGCACGAAGCTGGATTGGGTCGGGGTCGACCACTGGAACACGGATAATCCCCACCTCCACAT
ATTGGTGCGGGGCCGGACCGATGACGGCCAGGACCTCGTCATCTCCCGTGACTACATCAAGGAGGGCATGCGCGCCCGTG
CGCAGGCTCTCGTCACCCAGGAGCTGGGGCCGCGCACCGACCTCGACATCCACCGCGCCGTCGAGCGGCAGGTGGAGGCG
GAGGGCTGGACCCAGCTCGACCGCCAATTGCTCCGGGACCAGCGCGAGGCCGGCATCATCGACGTGGCGCGCGACGCCGA
TGGCGGGCCGGACGCTTTCCTGCCGATGAAGGTGGGCCGGCTGCGCAAGCTCGAGACCCTCGGCCTCGCGGACGAGATCG
GCCCCGGCCAATGGGTCATCGACGAGAAGGCTGAGGCGACACTGCGCGCTCTTGACGACCGCGGCGACATCATCAAGCGG
ATACACCGGGCTCTCACCGCCCAGGGGATCGAGCGGGGCCCCGCAAGCTATGTGCTTGCCGGCGAGAGCCTGGATGCTCC
CGTCATCGGCCGTCTCGTCGATCGCGGCCTCGATGATGAGTTGAAGGGCACGGCCTATGCCGTCGTCGACGGCGTGGATG
GGCGTACCCACCACATCCGGCTGCCCGACCTCGATGCGGCAGGCGACGGCGCGCCCGGCGCCATCGTGGAGCTTCGGCGG
TTCGAGGACGGGCGCGGCCAGCAGCGGGTCGCGCTGGCCGTCCGCTCCGACCTTGACATCGAACGCCAGGTCACGGCTTC
GGGCGCCACCTGGCTCGACCGGCAGGCGCTCAGCCGCGCGCCGGCATCGCTCTCCGAAGGCGGCTTCGGCGCCGAGGTGC
GTGAGGCTATGGAACGCCGCGCCGACCATCTGGTCCGGGAGGGGTTGGCCGAGCGCCACGGCCAGCGTGTCACCTTCGCC
CGGGACCTGATCGAGACTTTGCGCCGGCGGGAAGTGGACGCGCTGGGCGAGAAGCTCTCCGGGGAGACGGGGCAGCCTTT
CAACCGATCAGGATCGGGACACTATGTCTCCGGCACCTATCGCCAGCGCTTCGCGCTCGCCTCTGGCCGCTTCGCCATGA
TCGACGACGGCCTCGGCTTCCAGCTCGTGCCCTGGACGCCGTCCCTCGAGAAGCAGCTCGGCAAGCACATCTCCGGCGTC
GCCCGCTCAGACGGCGGCATCGACTGGTCCTTCGGCCGCAAGCGCGGCCTCGGCCTCTAA

Upstream 100 bases:

>100_bases
ATTTTCAGCCAAACGCACCTTGCGCCGCTGCTTGGCAATGTGCGCAGAACACTCAAGCCCTTGGTCCTGTTTGCCTTTTC
GCACCCTACAGGGGCGCGCC

Downstream 100 bases:

>100_bases
CTTGCTAATCACTGGAGCACCGCATGTCCGCGACCAAGATCCTTTGGGGCCAGATCCTCCTTGTCCTCGCCATCGTGCTC
GCCACCACCTGGGGCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MADDREFRVRPGRIRSTRAQRARPFIAQALAAAQKAGGHVSRSGRISSGARSRFGRGRAASIVANRLLTGRSRVVVIKTR
VVRHTARAAPLTAHLSYLRREGVTRDGEKARLFGPGTEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFADDLVG
RMEKDLGTKLDWVGVDHWNTDNPHLHILVRGRTDDGQDLVISRDYIKEGMRARAQALVTQELGPRTDLDIHRAVERQVEA
EGWTQLDRQLLRDQREAGIIDVARDADGGPDAFLPMKVGRLRKLETLGLADEIGPGQWVIDEKAEATLRALDDRGDIIKR
IHRALTAQGIERGPASYVLAGESLDAPVIGRLVDRGLDDELKGTAYAVVDGVDGRTHHIRLPDLDAAGDGAPGAIVELRR
FEDGRGQQRVALAVRSDLDIERQVTASGATWLDRQALSRAPASLSEGGFGAEVREAMERRADHLVREGLAERHGQRVTFA
RDLIETLRRREVDALGEKLSGETGQPFNRSGSGHYVSGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHISGV
ARSDGGIDWSFGRKRGLGL

Sequences:

>Translated_579_residues
MADDREFRVRPGRIRSTRAQRARPFIAQALAAAQKAGGHVSRSGRISSGARSRFGRGRAASIVANRLLTGRSRVVVIKTR
VVRHTARAAPLTAHLSYLRREGVTRDGEKARLFGPGTEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFADDLVG
RMEKDLGTKLDWVGVDHWNTDNPHLHILVRGRTDDGQDLVISRDYIKEGMRARAQALVTQELGPRTDLDIHRAVERQVEA
EGWTQLDRQLLRDQREAGIIDVARDADGGPDAFLPMKVGRLRKLETLGLADEIGPGQWVIDEKAEATLRALDDRGDIIKR
IHRALTAQGIERGPASYVLAGESLDAPVIGRLVDRGLDDELKGTAYAVVDGVDGRTHHIRLPDLDAAGDGAPGAIVELRR
FEDGRGQQRVALAVRSDLDIERQVTASGATWLDRQALSRAPASLSEGGFGAEVREAMERRADHLVREGLAERHGQRVTFA
RDLIETLRRREVDALGEKLSGETGQPFNRSGSGHYVSGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHISGV
ARSDGGIDWSFGRKRGLGL
>Mature_578_residues
ADDREFRVRPGRIRSTRAQRARPFIAQALAAAQKAGGHVSRSGRISSGARSRFGRGRAASIVANRLLTGRSRVVVIKTRV
VRHTARAAPLTAHLSYLRREGVTRDGEKARLFGPGTEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFADDLVGR
MEKDLGTKLDWVGVDHWNTDNPHLHILVRGRTDDGQDLVISRDYIKEGMRARAQALVTQELGPRTDLDIHRAVERQVEAE
GWTQLDRQLLRDQREAGIIDVARDADGGPDAFLPMKVGRLRKLETLGLADEIGPGQWVIDEKAEATLRALDDRGDIIKRI
HRALTAQGIERGPASYVLAGESLDAPVIGRLVDRGLDDELKGTAYAVVDGVDGRTHHIRLPDLDAAGDGAPGAIVELRRF
EDGRGQQRVALAVRSDLDIERQVTASGATWLDRQALSRAPASLSEGGFGAEVREAMERRADHLVREGLAERHGQRVTFAR
DLIETLRRREVDALGEKLSGETGQPFNRSGSGHYVSGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHISGVA
RSDGGIDWSFGRKRGLGL

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63709; Mature: 63577

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDREFRVRPGRIRSTRAQRARPFIAQALAAAQKAGGHVSRSGRISSGARSRFGRGRAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHH
SIVANRLLTGRSRVVVIKTRVVRHTARAAPLTAHLSYLRREGVTRDGEKARLFGPGTEEG
HHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
DGRAFAERCADDRHHFRFIVSPEDAADMADLRSFADDLVGRMEKDLGTKLDWVGVDHWNT
CCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
DNPHLHILVRGRTDDGQDLVISRDYIKEGMRARAQALVTQELGPRTDLDIHRAVERQVEA
CCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGWTQLDRQLLRDQREAGIIDVARDADGGPDAFLPMKVGRLRKLETLGLADEIGPGQWVI
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEE
DEKAEATLRALDDRGDIIKRIHRALTAQGIERGPASYVLAGESLDAPVIGRLVDRGLDDE
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCC
LKGTAYAVVDGVDGRTHHIRLPDLDAAGDGAPGAIVELRRFEDGRGQQRVALAVRSDLDI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCEEEEEECCCCCC
ERQVTASGATWLDRQALSRAPASLSEGGFGAEVREAMERRADHLVREGLAERHGQRVTFA
HHHEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH
RDLIETLRRREVDALGEKLSGETGQPFNRSGSGHYVSGTYRQRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCEEEEECCCCE
QLVPWTPSLEKQLGKHISGVARSDGGIDWSFGRKRGLGL
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADDREFRVRPGRIRSTRAQRARPFIAQALAAAQKAGGHVSRSGRISSGARSRFGRGRAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHH
SIVANRLLTGRSRVVVIKTRVVRHTARAAPLTAHLSYLRREGVTRDGEKARLFGPGTEEG
HHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
DGRAFAERCADDRHHFRFIVSPEDAADMADLRSFADDLVGRMEKDLGTKLDWVGVDHWNT
CCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
DNPHLHILVRGRTDDGQDLVISRDYIKEGMRARAQALVTQELGPRTDLDIHRAVERQVEA
CCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGWTQLDRQLLRDQREAGIIDVARDADGGPDAFLPMKVGRLRKLETLGLADEIGPGQWVI
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEE
DEKAEATLRALDDRGDIIKRIHRALTAQGIERGPASYVLAGESLDAPVIGRLVDRGLDDE
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCC
LKGTAYAVVDGVDGRTHHIRLPDLDAAGDGAPGAIVELRRFEDGRGQQRVALAVRSDLDI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCEEEEEECCCCCC
ERQVTASGATWLDRQALSRAPASLSEGGFGAEVREAMERRADHLVREGLAERHGQRVTFA
HHHEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH
RDLIETLRRREVDALGEKLSGETGQPFNRSGSGHYVSGTYRQRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCEEEEECCCCE
QLVPWTPSLEKQLGKHISGVARSDGGIDWSFGRKRGLGL
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA