Click here to switch to the map view.

The map label for this gene is 154244536

Identifier: 154244536

GI number: 154244536

Start: 652693

End: 653832

Strand: Direct

Name: 154244536

Synonym: Xaut_0581

Alternate gene names: NA

Gene position: 652693-653832 (Clockwise)

Preceding gene: 154244535

Following gene: 154244537

Centisome position: 12.29

GC content: 62.81

Gene sequence:

>1140_bases
ATGGCAGCACAGCACCGCTCTCCGCAACCCGGCAGACAGCTTGAGCTGTTCCGCGCGCTCCCTGGCGCATTCGCGCCCCG
CGATGCGCAGGATCTCATGGCCTATCCCTTCTTCTCCCTCGCCAAAACCCACCGTGTCGCCCCCATCGATTTTATCTCCG
GCGACATCGCGATCCGGGTCGAGGCGGTGCCCGACCATGGCATGGCCACCATCTGGGATGCGGATATCCTGATCTGGGCG
GCCAGCCAGATCGTCGAGGCCCGTGATGCGGGACTGCGCACCTCCCGCTTCATGGCGGCAACGCCCTATGAGATCCTCCG
GTTCGTGGGCCGGGGCACCTCGCTCAGGGACTATCAGCGCCTGAAGGCCGCCCTGGACCGCCTGCAGTCCACCACGGTCT
CCACATCCATCCGCCAGAGAACGGAGGGCCGGCGCCACCGCTTCTCCTGGATCAATGAATGGAAGGAGCGCACGGACCGG
GATGGCAAGCCCGCCGGGATCGAGCTCATCGTCCCCGACTGGTTCTATTGCGCCATCGTCGAGGACGCGCTCGTCCTCAC
CATCGACCGGGCGTATTTCGACCTCACGGGCGGGCTGGAGCGCTGGCTCTACCGGATTGTGCGCAAGCATGGCGGGCGGC
AGCGCCGGGGCTGGCGCTTCGATTTCCGCCACCTCCACCTTAAATCCGGCAGCCTCTCGCCCTTCAAGCGCTTCGCCTTC
GAACTGCGCGACATCGTCCGCCGTCAGCCGTTGCCGGGCTACACCCTGTTCACGGAGGTGGAGATTGGCGGGCGGGTGCT
TCTCACCTTCGAGCCGTCGGCGTCCTGTGGAAAAGCTGTGAAAGCCTTCGTGCCATCCGGAACCCGGACTGGCGTGCCAT
CGGGAACGGGCCTCCCGTGCCATCGGGAACCGAAACAGGTCTCAAGCCCAGGTGATGAAAATGAAAATTGCGCCCCTAAC
TTAGAATCTAACATAGAGTCTAACCTTAAAAGGCGCGCAGGCGATGTGGATAACTGCCATCTCCCGTACACTTCTCAAGA
TGATGGTCTTCCGTCTTTCCGTAAAGACGGATTTCACGCTCCCGATCCTTTGACAGCAGGCGAAACGATGCCTGCCGACA
CATCGGGAGCATCCCGATGA

Upstream 100 bases:

>100_bases
CCTCCACCTCCGATCCGCGCGGCTCCATCCTGCCGGCCAAGCGTCATTCCATGCCTGGCGTCCTGCCGGGCAGCCCCGCG
CGCTGAGCGGCCATTTCATC

Downstream 100 bases:

>100_bases
TCGTCGCGCTGCTCAACCAGAAGGGCGGCGTCGGCAAGACGACGCTCGCCCTTCATCTCGCCGGCGCGTGGGCGAGCCGC
GGCCAACGTGTCACGCTCAT

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAAQHRSPQPGRQLELFRALPGAFAPRDAQDLMAYPFFSLAKTHRVAPIDFISGDIAIRVEAVPDHGMATIWDADILIWA
ASQIVEARDAGLRTSRFMAATPYEILRFVGRGTSLRDYQRLKAALDRLQSTTVSTSIRQRTEGRRHRFSWINEWKERTDR
DGKPAGIELIVPDWFYCAIVEDALVLTIDRAYFDLTGGLERWLYRIVRKHGGRQRRGWRFDFRHLHLKSGSLSPFKRFAF
ELRDIVRRQPLPGYTLFTEVEIGGRVLLTFEPSASCGKAVKAFVPSGTRTGVPSGTGLPCHREPKQVSSPGDENENCAPN
LESNIESNLKRRAGDVDNCHLPYTSQDDGLPSFRKDGFHAPDPLTAGETMPADTSGASR

Sequences:

>Translated_379_residues
MAAQHRSPQPGRQLELFRALPGAFAPRDAQDLMAYPFFSLAKTHRVAPIDFISGDIAIRVEAVPDHGMATIWDADILIWA
ASQIVEARDAGLRTSRFMAATPYEILRFVGRGTSLRDYQRLKAALDRLQSTTVSTSIRQRTEGRRHRFSWINEWKERTDR
DGKPAGIELIVPDWFYCAIVEDALVLTIDRAYFDLTGGLERWLYRIVRKHGGRQRRGWRFDFRHLHLKSGSLSPFKRFAF
ELRDIVRRQPLPGYTLFTEVEIGGRVLLTFEPSASCGKAVKAFVPSGTRTGVPSGTGLPCHREPKQVSSPGDENENCAPN
LESNIESNLKRRAGDVDNCHLPYTSQDDGLPSFRKDGFHAPDPLTAGETMPADTSGASR
>Mature_378_residues
AAQHRSPQPGRQLELFRALPGAFAPRDAQDLMAYPFFSLAKTHRVAPIDFISGDIAIRVEAVPDHGMATIWDADILIWAA
SQIVEARDAGLRTSRFMAATPYEILRFVGRGTSLRDYQRLKAALDRLQSTTVSTSIRQRTEGRRHRFSWINEWKERTDRD
GKPAGIELIVPDWFYCAIVEDALVLTIDRAYFDLTGGLERWLYRIVRKHGGRQRRGWRFDFRHLHLKSGSLSPFKRFAFE
LRDIVRRQPLPGYTLFTEVEIGGRVLLTFEPSASCGKAVKAFVPSGTRTGVPSGTGLPCHREPKQVSSPGDENENCAPNL
ESNIESNLKRRAGDVDNCHLPYTSQDDGLPSFRKDGFHAPDPLTAGETMPADTSGASR

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 42551; Mature: 42419

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQHRSPQPGRQLELFRALPGAFAPRDAQDLMAYPFFSLAKTHRVAPIDFISGDIAIRV
CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE
EAVPDHGMATIWDADILIWAASQIVEARDAGLRTSRFMAATPYEILRFVGRGTSLRDYQR
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHCCCCCHHHHHH
LKAALDRLQSTTVSTSIRQRTEGRRHRFSWINEWKERTDRDGKPAGIELIVPDWFYCAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHH
EDALVLTIDRAYFDLTGGLERWLYRIVRKHGGRQRRGWRFDFRHLHLKSGSLSPFKRFAF
HCEEEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECEEEEEECCCCCCHHHHHHH
ELRDIVRRQPLPGYTLFTEVEIGGRVLLTFEPSASCGKAVKAFVPSGTRTGVPSGTGLPC
HHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
HREPKQVSSPGDENENCAPNLESNIESNLKRRAGDVDNCHLPYTSQDDGLPSFRKDGFHA
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDPLTAGETMPADTSGASR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAQHRSPQPGRQLELFRALPGAFAPRDAQDLMAYPFFSLAKTHRVAPIDFISGDIAIRV
CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE
EAVPDHGMATIWDADILIWAASQIVEARDAGLRTSRFMAATPYEILRFVGRGTSLRDYQR
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHCCCCCHHHHHH
LKAALDRLQSTTVSTSIRQRTEGRRHRFSWINEWKERTDRDGKPAGIELIVPDWFYCAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHH
EDALVLTIDRAYFDLTGGLERWLYRIVRKHGGRQRRGWRFDFRHLHLKSGSLSPFKRFAF
HCEEEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECEEEEEECCCCCCHHHHHHH
ELRDIVRRQPLPGYTLFTEVEIGGRVLLTFEPSASCGKAVKAFVPSGTRTGVPSGTGLPC
HHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
HREPKQVSSPGDENENCAPNLESNIESNLKRRAGDVDNCHLPYTSQDDGLPSFRKDGFHA
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDPLTAGETMPADTSGASR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]