| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yhiI [C]
Identifier: 154244413
GI number: 154244413
Start: 498813
End: 499787
Strand: Direct
Name: yhiI [C]
Synonym: Xaut_0456
Alternate gene names: 154244413
Gene position: 498813-499787 (Clockwise)
Preceding gene: 154244412
Following gene: 154244414
Centisome position: 9.4
GC content: 71.9
Gene sequence:
>975_bases GTGAGACCCCATCGATATTCTTTCCTGCTCCGTCCTGTCGCCGCCGTCCTCGCGACGCTCGGCCTCGCCGCATGCGCCCC TGAACCCGCAGACAGCTTCTCCGGCTATGTGGAGGGTGACATTGTCTTCATCGGCCCCACCGAGGCCGGCCGGGTGAGCG CGCTCGCGGTGGAGGAGGGCAGCGTGGTGAAATCCGGCGACGTGGTCGCCCGGGTGGAGGACGATCTGCAGGTCGCCGAT CGGGACGCGGCGGCCGCCCAGCTGAAGGAGGCCGAGGCCCGGCTCGCCGATGCGCGCGCGCCGCTGCAGCGGCCCGAGGA AATCGCCGTGCTCGATGCCGCCGAGCACCGCGCCGCCGCCGCCCTCGACCAGTCCCGCCTCGATCTCGACCGCCAGAAGG CGCTGGTGCCCAAGGGCGCATCCTCACAGGCCAACCTCGATGCGGCCCAGCACCAGTTCGACCAGAACCAGGCGGCCCTC GACGAGGCGCGCAAGCGCATCGCCGCCGCCGGCATCGCCGCCCGCACCCACGCCATCGATGCCGCCGAGCAGGCGGTGTC CGCCGCGCGCGCCACCCTTGCCGCCGCGCAGGTCCGGCTCGACCGGCGCACTCTGAAGGCGCCCACGAACGGTCCGGTGC AGACCGTCTATTACCGTGTCGGCGAGCTGGTGCCCGAGGGCCGGCCGGTGGTCTCCATTCTGCCGCCGGGCCTGGTGAAG GTGCGCTTCTTCGTGCCGGAACAGGTGCTGCCGAACGTGGCGCTGGGCAGCCGCGTCACCGTCACCTGCGACGGCTGCCC GAGCACCACGGCGAAGATCTTCTTCATCTCCGCCCAGGCGGAATATACCCCGCCCGTGATCTACAGCCGGGAGGAGCGCT CCAAGCTCGTCTATCTGGTGGAGGCGCGGCCCGACGACCCCGCCAAGGCCCGGCCGGGCCAGCCGGTGAACGTCGCGCTG GGGGCGACGCCATGA
Upstream 100 bases:
>100_bases TGTGGAACGGCATGTTCGGCAGCTTCGACCCGCTCGACGTGAGGGCGTTCCTCTCGGCGCACCGGGACCTGCTGCTGCGC GGGCTCGGATGGAGAGACAC
Downstream 100 bases:
>100_bases ATCCGGCCCAGGAGGCCGCACCGGCTGCGTCCGGCCGCGCCACCCCGGAGGTCGCCATCGAGGTGGAGAATCTCTGCAAG AGCTTCGGCGGCCGGCGGGT
Product: secretion protein HlyD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRPHRYSFLLRPVAAVLATLGLAACAPEPADSFSGYVEGDIVFIGPTEAGRVSALAVEEGSVVKSGDVVARVEDDLQVAD RDAAAAQLKEAEARLADARAPLQRPEEIAVLDAAEHRAAAALDQSRLDLDRQKALVPKGASSQANLDAAQHQFDQNQAAL DEARKRIAAAGIAARTHAIDAAEQAVSAARATLAAAQVRLDRRTLKAPTNGPVQTVYYRVGELVPEGRPVVSILPPGLVK VRFFVPEQVLPNVALGSRVTVTCDGCPSTTAKIFFISAQAEYTPPVIYSREERSKLVYLVEARPDDPAKARPGQPVNVAL GATP
Sequences:
>Translated_324_residues MRPHRYSFLLRPVAAVLATLGLAACAPEPADSFSGYVEGDIVFIGPTEAGRVSALAVEEGSVVKSGDVVARVEDDLQVAD RDAAAAQLKEAEARLADARAPLQRPEEIAVLDAAEHRAAAALDQSRLDLDRQKALVPKGASSQANLDAAQHQFDQNQAAL DEARKRIAAAGIAARTHAIDAAEQAVSAARATLAAAQVRLDRRTLKAPTNGPVQTVYYRVGELVPEGRPVVSILPPGLVK VRFFVPEQVLPNVALGSRVTVTCDGCPSTTAKIFFISAQAEYTPPVIYSREERSKLVYLVEARPDDPAKARPGQPVNVAL GATP >Mature_324_residues MRPHRYSFLLRPVAAVLATLGLAACAPEPADSFSGYVEGDIVFIGPTEAGRVSALAVEEGSVVKSGDVVARVEDDLQVAD RDAAAAQLKEAEARLADARAPLQRPEEIAVLDAAEHRAAAALDQSRLDLDRQKALVPKGASSQANLDAAQHQFDQNQAAL DEARKRIAAAGIAARTHAIDAAEQAVSAARATLAAAQVRLDRRTLKAPTNGPVQTVYYRVGELVPEGRPVVSILPPGLVK VRFFVPEQVLPNVALGSRVTVTCDGCPSTTAKIFFISAQAEYTPPVIYSREERSKLVYLVEARPDDPAKARPGQPVNVAL GATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1789900, Length=311, Percent_Identity=32.475884244373, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787013, Length=282, Percent_Identity=31.5602836879433, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 34345; Mature: 34345
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPHRYSFLLRPVAAVLATLGLAACAPEPADSFSGYVEGDIVFIGPTEAGRVSALAVEEG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEECCCCCCCEEEEEECCC SVVKSGDVVARVEDDLQVADRDAAAAQLKEAEARLADARAPLQRPEEIAVLDAAEHRAAA CEEECCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHH ALDQSRLDLDRQKALVPKGASSQANLDAAQHQFDQNQAALDEARKRIAAAGIAARTHAID HHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AAEQAVSAARATLAAAQVRLDRRTLKAPTNGPVQTVYYRVGELVPEGRPVVSILPPGLVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEE VRFFVPEQVLPNVALGSRVTVTCDGCPSTTAKIFFISAQAEYTPPVIYSREERSKLVYLV EEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEE EARPDDPAKARPGQPVNVALGATP ECCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MRPHRYSFLLRPVAAVLATLGLAACAPEPADSFSGYVEGDIVFIGPTEAGRVSALAVEEG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEECCCCCCCEEEEEECCC SVVKSGDVVARVEDDLQVADRDAAAAQLKEAEARLADARAPLQRPEEIAVLDAAEHRAAA CEEECCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHH ALDQSRLDLDRQKALVPKGASSQANLDAAQHQFDQNQAALDEARKRIAAAGIAARTHAID HHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AAEQAVSAARATLAAAQVRLDRRTLKAPTNGPVQTVYYRVGELVPEGRPVVSILPPGLVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEE VRFFVPEQVLPNVALGSRVTVTCDGCPSTTAKIFFISAQAEYTPPVIYSREERSKLVYLV EEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEE EARPDDPAKARPGQPVNVALGATP ECCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA