| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is paaY [C]
Identifier: 154244410
GI number: 154244410
Start: 496482
End: 497012
Strand: Direct
Name: paaY [C]
Synonym: Xaut_0453
Alternate gene names: 154244410
Gene position: 496482-497012 (Clockwise)
Preceding gene: 154244407
Following gene: 154244412
Centisome position: 9.35
GC content: 66.29
Gene sequence:
>531_bases ATGCCCATCTATGCCCTCGACGGTGTCGCGCCCACCCTGCCCGCCTCGGGACATTACTGGATCGCGCCGGACGCGGTGCT CATCGGCAATGTGACCCTGAAGGAAGGCGCCAGCATCTGGTTCGGCAGCGTGCTGCGCGGCGACAACGAGCCCATCGTGG TGGGGGAGGGGTCAAACATCCAGGAAAACTGCGTGCTCCACACCGATCCCGGCTTTCCGCTCACCCTCGGCACCAACGTG ACCGTGGGCCACATGGCGACCCTGCACGGCTGCATCGTGGGTGACGGCAGCCTCATCGGCATGGGCTCCACGGTGCTGAA CGGGGCGAATATCGCCAGCAAATGCCTCGTCGGCTCCAAGGCGCTGGTGACGGAAGGCAAGGTGTTCGAGCCCTTCTCGC TCATCGTCGGGGCGCCCGCCAAGGTGGCGCGGCAGATCGACGAGGCGACGGCGGCGCGCCTCGTCGGCACTGCAGAGCAT TACCAGCGCAACTGGCAGCGCTATGCCAAGGGCCTGAAGCGCATCGACTGA
Upstream 100 bases:
>100_bases GTTACGCCAGCTTGGCGCCAGCGGGATGCGATTGGACGCTAGCACGGCGGCTTGGGCCGGTATAGTGACGCAACCGGACC CTGTACGACCGGAGACCGCC
Downstream 100 bases:
>100_bases CCGGGCCTGGAATAGAAAACGGGCCGGAACCGCGGCGTCGGTTCCGGCCCGTCTTGCCGCCGTGGCGCGGCCGAAGCCGC GCGCCGGCGGAAGCTGATCA
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPIYALDGVAPTLPASGHYWIAPDAVLIGNVTLKEGASIWFGSVLRGDNEPIVVGEGSNIQENCVLHTDPGFPLTLGTNV TVGHMATLHGCIVGDGSLIGMGSTVLNGANIASKCLVGSKALVTEGKVFEPFSLIVGAPAKVARQIDEATAARLVGTAEH YQRNWQRYAKGLKRID
Sequences:
>Translated_176_residues MPIYALDGVAPTLPASGHYWIAPDAVLIGNVTLKEGASIWFGSVLRGDNEPIVVGEGSNIQENCVLHTDPGFPLTLGTNV TVGHMATLHGCIVGDGSLIGMGSTVLNGANIASKCLVGSKALVTEGKVFEPFSLIVGAPAKVARQIDEATAARLVGTAEH YQRNWQRYAKGLKRID >Mature_175_residues PIYALDGVAPTLPASGHYWIAPDAVLIGNVTLKEGASIWFGSVLRGDNEPIVVGEGSNIQENCVLHTDPGFPLTLGTNVT VGHMATLHGCIVGDGSLIGMGSTVLNGANIASKCLVGSKALVTEGKVFEPFSLIVGAPAKVARQIDEATAARLVGTAEHY QRNWQRYAKGLKRID
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=177, Percent_Identity=39.5480225988701, Blast_Score=119, Evalue=8e-29, Organism=Escherichia coli, GI87082240, Length=153, Percent_Identity=37.2549019607843, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87081681, Length=164, Percent_Identity=34.7560975609756, Blast_Score=97, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18463; Mature: 18332
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYALDGVAPTLPASGHYWIAPDAVLIGNVTLKEGASIWFGSVLRGDNEPIVVGEGSNI CCEEECCCCCCCCCCCCEEEECCCEEEEECEEECCCCCEEEHHHHCCCCCCEEEECCCCC QENCVLHTDPGFPLTLGTNVTVGHMATLHGCIVGDGSLIGMGSTVLNGANIASKCLVGSK CCCEEEECCCCCCEEECCCEEEHHHHHHHEEEECCCCEEECCHHHCCCCCHHHHHHCCCC ALVTEGKVFEPFSLIVGAPAKVARQIDEATAARLVGTAEHYQRNWQRYAKGLKRID EEEECCCCCCCHHHEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIYALDGVAPTLPASGHYWIAPDAVLIGNVTLKEGASIWFGSVLRGDNEPIVVGEGSNI CEEECCCCCCCCCCCCEEEECCCEEEEECEEECCCCCEEEHHHHCCCCCCEEEECCCCC QENCVLHTDPGFPLTLGTNVTVGHMATLHGCIVGDGSLIGMGSTVLNGANIASKCLVGSK CCCEEEECCCCCCEEECCCEEEHHHHHHHEEEECCCCEEECCHHHCCCCCHHHHHHCCCC ALVTEGKVFEPFSLIVGAPAKVARQIDEATAARLVGTAEHYQRNWQRYAKGLKRID EEEECCCCCCCHHHEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]