| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154244391
Identifier: 154244391
GI number: 154244391
Start: 472445
End: 473893
Strand: Direct
Name: 154244391
Synonym: Xaut_0434
Alternate gene names: NA
Gene position: 472445-473893 (Clockwise)
Preceding gene: 154244390
Following gene: 154244395
Centisome position: 8.9
GC content: 59.7
Gene sequence:
>1449_bases ATGACTTTCAAGGCGCACGTCTTTGACGAGCCAATGCTTGAATTTGGTGACGGCGGACAGCATTGCGATCCGCGTCAGGG CTTGCGCGAGCATGGGCCGTTGCAACCACGTTCCGGCGACGTTATCCGCGTCGGCGTCATCGGCACGGACGACACCGTTG CAGGCTTCACTGAATTTCTCGCAGAGACCGGGCGAGGCATCGAAAGCGGAAACAAGCAGCTTATCAATCTCAACCCAGAC TTTCCGGGGTTGGGCAATCAGAACCCGTTTCGGTGCAAGTTCGAGGTGCCGGACGGGGCTACAGTCACTATTTCCCGGCG TCAGGTCAATGATATCACCGGCATAGGCCGTCACGACGAAGCGGTCCGCCATGCCGTCGAATTGATCTCTTCGCAGCTTT CGGCCCTGGTCGAAGGCAGCGCCAAGCCCGACGTCATTGTCCTGGCCCTGCCCATTCCGCTCATCGAAAAGCTCGTCAAC GCCAAGAGCGAAGGGGAAGACAGCGACGACGACGTTGACGGCGGTGACATGCTCAACTTCCGTGACCTGCTCAAAGCGAA GACGCTTCACCTGCCGGTCCCGACACAGATCGTCTGGCCGGATACGTGGGACGATGCCGCAAAAATCCCCCGCAAAATCA AACGCGACAGCAACCGTCAAACGCAGGTAAAGGCGACGCGCGCGTGGAATCTTCTCAACGCGCTCTTCTACAAGGCGGGC AAAGTGCCGTGGCGCTTGCTGCCGGATCAGGCGGAATACCGCACAAGCTTCCTGGGCATCGGATTTTATCGTGACCTCGA CGGTCAGCAACTCTGGACCAGCACCGCGCAGATGTTCGACGAGCGTGGGCGCGGTCTCATTTTGCGCGGTGCGCGTGCGC AAACGGAGACACGGGGCCGTCATCCATATCTGACCGCCAAAGACGCGGAAGACCTCGTGGTGCAGTCCATCGCGGCGTAC AAAGCGCATCACCGCCATGTGCCTGCGCGGCTGGTGGTCCTGAAGACCTCACGCTTCCGTTCTGAAGAGGCAGAGGGCAT CGACGCCGCCCTTGGGAAGTCCGGCATCGAGATGTCTGACCTCGTATGGGTGCAGGAGAGTTCGCCAATCGCCATCTTCC GAGACGGCAATTATCCCGTTCTGCGCGGGACATTCGTCGATCTTGACGGCAAGGGCCTGCTATACACGCGTGGCAGCGTA CCGTTCTATGGGACATTCCCCGGCCTCCGCGTGCCGCGCCCTTTGCTCCTTGTGCCCCATGAAAACTCAGACAGCACAAT CCTCACGCTGGCGAAGGACGTGCTCGCGCTGACAAAGGTGAACTGGAATACGACGCAGTTCGATCAGAAGCTACCGGCGC CGATCAAGGCAGCACGGGAGGTCGGGCGCATTCTTAAGCACGTCGAGTTCGGGACAGCGGTGTCATCAGATTTTCGCCGT TACACATAG
Upstream 100 bases:
>100_bases TCCAGTTGTCTCAAGCCGTGCCGGAATCCTCATGGAACCGGACCGATCCGCGAGCCAAGGAGATGGAAGCGCAAGACCTC TTTGAGGAAGGGGGCGTCGG
Downstream 100 bases:
>100_bases AAGGGCCTTGCTGCTTAAGGGTGCTGATCGTATCGGAGATCACACCCTGCTCCTGGTACTGATCGCCGAACGCATCTTCG ACGGCGTGAAGAGAATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTFKAHVFDEPMLEFGDGGQHCDPRQGLREHGPLQPRSGDVIRVGVIGTDDTVAGFTEFLAETGRGIESGNKQLINLNPD FPGLGNQNPFRCKFEVPDGATVTISRRQVNDITGIGRHDEAVRHAVELISSQLSALVEGSAKPDVIVLALPIPLIEKLVN AKSEGEDSDDDVDGGDMLNFRDLLKAKTLHLPVPTQIVWPDTWDDAAKIPRKIKRDSNRQTQVKATRAWNLLNALFYKAG KVPWRLLPDQAEYRTSFLGIGFYRDLDGQQLWTSTAQMFDERGRGLILRGARAQTETRGRHPYLTAKDAEDLVVQSIAAY KAHHRHVPARLVVLKTSRFRSEEAEGIDAALGKSGIEMSDLVWVQESSPIAIFRDGNYPVLRGTFVDLDGKGLLYTRGSV PFYGTFPGLRVPRPLLLVPHENSDSTILTLAKDVLALTKVNWNTTQFDQKLPAPIKAAREVGRILKHVEFGTAVSSDFRR YT
Sequences:
>Translated_482_residues MTFKAHVFDEPMLEFGDGGQHCDPRQGLREHGPLQPRSGDVIRVGVIGTDDTVAGFTEFLAETGRGIESGNKQLINLNPD FPGLGNQNPFRCKFEVPDGATVTISRRQVNDITGIGRHDEAVRHAVELISSQLSALVEGSAKPDVIVLALPIPLIEKLVN AKSEGEDSDDDVDGGDMLNFRDLLKAKTLHLPVPTQIVWPDTWDDAAKIPRKIKRDSNRQTQVKATRAWNLLNALFYKAG KVPWRLLPDQAEYRTSFLGIGFYRDLDGQQLWTSTAQMFDERGRGLILRGARAQTETRGRHPYLTAKDAEDLVVQSIAAY KAHHRHVPARLVVLKTSRFRSEEAEGIDAALGKSGIEMSDLVWVQESSPIAIFRDGNYPVLRGTFVDLDGKGLLYTRGSV PFYGTFPGLRVPRPLLLVPHENSDSTILTLAKDVLALTKVNWNTTQFDQKLPAPIKAAREVGRILKHVEFGTAVSSDFRR YT >Mature_481_residues TFKAHVFDEPMLEFGDGGQHCDPRQGLREHGPLQPRSGDVIRVGVIGTDDTVAGFTEFLAETGRGIESGNKQLINLNPDF PGLGNQNPFRCKFEVPDGATVTISRRQVNDITGIGRHDEAVRHAVELISSQLSALVEGSAKPDVIVLALPIPLIEKLVNA KSEGEDSDDDVDGGDMLNFRDLLKAKTLHLPVPTQIVWPDTWDDAAKIPRKIKRDSNRQTQVKATRAWNLLNALFYKAGK VPWRLLPDQAEYRTSFLGIGFYRDLDGQQLWTSTAQMFDERGRGLILRGARAQTETRGRHPYLTAKDAEDLVVQSIAAYK AHHRHVPARLVVLKTSRFRSEEAEGIDAALGKSGIEMSDLVWVQESSPIAIFRDGNYPVLRGTFVDLDGKGLLYTRGSVP FYGTFPGLRVPRPLLLVPHENSDSTILTLAKDVLALTKVNWNTTQFDQKLPAPIKAAREVGRILKHVEFGTAVSSDFRRY T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53517; Mature: 53386
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKAHVFDEPMLEFGDGGQHCDPRQGLREHGPLQPRSGDVIRVGVIGTDDTVAGFTEFL CCEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHH AETGRGIESGNKQLINLNPDFPGLGNQNPFRCKFEVPDGATVTISRRQVNDITGIGRHDE HHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHCCCCCHHH AVRHAVELISSQLSALVEGSAKPDVIVLALPIPLIEKLVNAKSEGEDSDDDVDGGDMLNF HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH RDLLKAKTLHLPVPTQIVWPDTWDDAAKIPRKIKRDSNRQTQVKATRAWNLLNALFYKAG HHHHHHCEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCC KVPWRLLPDQAEYRTSFLGIGFYRDLDGQQLWTSTAQMFDERGRGLILRGARAQTETRGR CCCEEECCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCC HPYLTAKDAEDLVVQSIAAYKAHHRHVPARLVVLKTSRFRSEEAEGIDAALGKSGIEMSD CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCHHHHHCCCCCCHHH LVWVQESSPIAIFRDGNYPVLRGTFVDLDGKGLLYTRGSVPFYGTFPGLRVPRPLLLVPH EEEEECCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCEEEEEC ENSDSTILTLAKDVLALTKVNWNTTQFDQKLPAPIKAAREVGRILKHVEFGTAVSSDFRR CCCCCEEHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHC YT CC >Mature Secondary Structure TFKAHVFDEPMLEFGDGGQHCDPRQGLREHGPLQPRSGDVIRVGVIGTDDTVAGFTEFL CEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHH AETGRGIESGNKQLINLNPDFPGLGNQNPFRCKFEVPDGATVTISRRQVNDITGIGRHDE HHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHCCCCCHHH AVRHAVELISSQLSALVEGSAKPDVIVLALPIPLIEKLVNAKSEGEDSDDDVDGGDMLNF HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH RDLLKAKTLHLPVPTQIVWPDTWDDAAKIPRKIKRDSNRQTQVKATRAWNLLNALFYKAG HHHHHHCEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCC KVPWRLLPDQAEYRTSFLGIGFYRDLDGQQLWTSTAQMFDERGRGLILRGARAQTETRGR CCCEEECCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCC HPYLTAKDAEDLVVQSIAAYKAHHRHVPARLVVLKTSRFRSEEAEGIDAALGKSGIEMSD CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCHHHHHCCCCCCHHH LVWVQESSPIAIFRDGNYPVLRGTFVDLDGKGLLYTRGSVPFYGTFPGLRVPRPLLLVPH EEEEECCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCEEEEEC ENSDSTILTLAKDVLALTKVNWNTTQFDQKLPAPIKAAREVGRILKHVEFGTAVSSDFRR CCCCCEEHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHC YT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]