BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

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The map label for this gene is fabG [H]

Identifier: 154244389

GI number: 154244389

Start: 469875

End: 470651

Strand: Direct

Name: fabG [H]

Synonym: Xaut_0432

Alternate gene names: 154244389

Gene position: 469875-470651 (Clockwise)

Preceding gene: 154244388

Following gene: 154244390

Centisome position: 8.85

GC content: 69.5

Gene sequence:

>777_bases
ATGGACCTCGGCATCACCGGAATCCGCGTGATCATCACCGCGGGCGCCGGGGGCATCGGCCTCGAAATCGCCCGCGCCTT
CGCCCGCGAGGGCGCGCGCATCGAAGTCTGCGACGTGGATCAGGCGGCGCTCGATGACCTGCCGCAGTCGGCGCCCGGCG
TCACCGGCTCTGTCTGCGACGTGGCCGACCGGGCGGCGGTACAACGCTTCATGGACGGGGCGCTCGGCCGCCTCGGCGGG
CTCGACGTGCTGGTGAACAACGCGGGTATCGCCGGCCCCACCGGCCGCGTGGACCAGATCTCCCCCGAGGACTGGGACCG
CACGCTGGCGGTGGACATCACCGGCCATTTCAACGTGACCCGGCTGGCCGTGCCGGCCCTGAAGCAGAGCGACAATCCCT
CCATCATCGGCCTCGCCTCGGCGGCCGGGCGCTTTGGCTTTCCGCTCCGCTCGCCCTACGCGGCAGCCAAATGGGGGGTG
GTGGGTTTCATCAAGTCTCTCGCCATGGAGCTGGGCGAATTCGGCATCCGTGCCAATGCCATCCTGCCGGGCTCGGTGGA
CGGGCCGCGCATCCGCTCGGTGTTCGAGCACAAGGCCCGCGAGCGCAACCTGTCCATGGAGGAGGTTCAGGCCATGGCGC
TCTCCGCCACCTCGCTGAAGCGCCTGATCCCTCCGCAGCATCTGGCCAACGTGGCGGTCTTCCTCGCCTCCCCGCTGGGC
TCCACCATTTCCGGCCAGGCCATCGCTGTGGACGGCGATCTGCAGATGCTGGTGTAG

Upstream 100 bases:

>100_bases
ATATCTGGAGCGCGGGGGACTTCATCCTGTCCCGCGATGTCCTGCCGGACTGACGCGGCTTTCACACCCAGAACAACAAG
CACTTCAACGGAGAAACGTC

Downstream 100 bases:

>100_bases
CCGCCACCGGACTTGCGCCAGCCCGCGCCAGCCGCCCCGGCCGGTATTCTATCTCAAGACCCGGTGGGGCGGCCCGGCGC
TCATGCGCCGGCGTTCGGAC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDLGITGIRVIITAGAGGIGLEIARAFAREGARIEVCDVDQAALDDLPQSAPGVTGSVCDVADRAAVQRFMDGALGRLGG
LDVLVNNAGIAGPTGRVDQISPEDWDRTLAVDITGHFNVTRLAVPALKQSDNPSIIGLASAAGRFGFPLRSPYAAAKWGV
VGFIKSLAMELGEFGIRANAILPGSVDGPRIRSVFEHKARERNLSMEEVQAMALSATSLKRLIPPQHLANVAVFLASPLG
STISGQAIAVDGDLQMLV

Sequences:

>Translated_258_residues
MDLGITGIRVIITAGAGGIGLEIARAFAREGARIEVCDVDQAALDDLPQSAPGVTGSVCDVADRAAVQRFMDGALGRLGG
LDVLVNNAGIAGPTGRVDQISPEDWDRTLAVDITGHFNVTRLAVPALKQSDNPSIIGLASAAGRFGFPLRSPYAAAKWGV
VGFIKSLAMELGEFGIRANAILPGSVDGPRIRSVFEHKARERNLSMEEVQAMALSATSLKRLIPPQHLANVAVFLASPLG
STISGQAIAVDGDLQMLV
>Mature_258_residues
MDLGITGIRVIITAGAGGIGLEIARAFAREGARIEVCDVDQAALDDLPQSAPGVTGSVCDVADRAAVQRFMDGALGRLGG
LDVLVNNAGIAGPTGRVDQISPEDWDRTLAVDITGHFNVTRLAVPALKQSDNPSIIGLASAAGRFGFPLRSPYAAAKWGV
VGFIKSLAMELGEFGIRANAILPGSVDGPRIRSVFEHKARERNLSMEEVQAMALSATSLKRLIPPQHLANVAVFLASPLG
STISGQAIAVDGDLQMLV

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=30.8943089430894, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI59889578, Length=213, Percent_Identity=31.924882629108, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI66933014, Length=228, Percent_Identity=27.6315789473684, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=30.5019305019305, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI210032110, Length=187, Percent_Identity=28.8770053475936, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI142976729, Length=197, Percent_Identity=26.9035532994924, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=27.843137254902, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=30.3867403314917, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI31542939, Length=215, Percent_Identity=29.7674418604651, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=27.0588235294118, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=26.3779527559055, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=27.3092369477912, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=35.1063829787234, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4758504, Length=273, Percent_Identity=29.6703296703297, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI20149619, Length=187, Percent_Identity=26.7379679144385, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI25282469, Length=231, Percent_Identity=26.8398268398268, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI157739938, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI33667109, Length=256, Percent_Identity=25, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI38348362, Length=172, Percent_Identity=31.3953488372093, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI210032112, Length=183, Percent_Identity=25.6830601092896, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI38424085, Length=172, Percent_Identity=31.3953488372093, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI40807363, Length=188, Percent_Identity=25.531914893617, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI224922801, Length=177, Percent_Identity=28.8135593220339, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4503817, Length=199, Percent_Identity=25.6281407035176, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI109715829, Length=258, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4503301, Length=225, Percent_Identity=27.5555555555556, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40548397, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI214010158, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI214010156, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI22758144, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI83715985, Length=198, Percent_Identity=31.3131313131313, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=34.3873517786561, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=30.5882352941176, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=32.9365079365079, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=28.0632411067194, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=27.8884462151394, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=29.2307692307692, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=25.390625, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=28.9156626506024, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789208, Length=187, Percent_Identity=31.0160427807487, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI2367175, Length=185, Percent_Identity=28.1081081081081, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=31.4741035856574, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=29.3650793650794, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=28.0632411067194, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=31.3253012048193, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=31.4393939393939, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=29.8507462686567, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17508895, Length=185, Percent_Identity=29.1891891891892, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=269, Percent_Identity=28.2527881040892, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=265, Percent_Identity=27.9245283018868, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=27.2251308900524, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=174, Percent_Identity=31.6091954022989, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=248, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=172, Percent_Identity=31.3953488372093, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=27.7566539923954, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=27.6119402985075, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=26.9662921348315, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=26.6917293233083, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=266, Percent_Identity=27.0676691729323, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=25.4980079681275, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=201, Percent_Identity=29.3532338308458, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.2030651340996, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=209, Percent_Identity=29.6650717703349, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=27.0676691729323, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=28.4644194756554, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=27.8388278388278, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=26.5917602996255, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=25, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=25.3968253968254, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=26.4822134387352, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=26.4150943396226, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=260, Percent_Identity=26.5384615384615, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322861, Length=186, Percent_Identity=30.6451612903226, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=27.5590551181102, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24639444, Length=261, Percent_Identity=31.0344827586207, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=30.6201550387597, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=29.6, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281364892, Length=202, Percent_Identity=30.6930693069307, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24640492, Length=201, Percent_Identity=26.3681592039801, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21356301, Length=209, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=26.7716535433071, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859837, Length=189, Percent_Identity=31.2169312169312, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24644337, Length=180, Percent_Identity=32.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=29.2682926829268, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581726, Length=219, Percent_Identity=29.6803652968037, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=27.8350515463918, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=27.5862068965517, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=26.9430051813472, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24649181, Length=190, Percent_Identity=25.7894736842105, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221510726, Length=181, Percent_Identity=28.1767955801105, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=25.2873563218391, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26874; Mature: 26874

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGITGIRVIITAGAGGIGLEIARAFAREGARIEVCDVDQAALDDLPQSAPGVTGSVCD
CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCHHHH
VADRAAVQRFMDGALGRLGGLDVLVNNAGIAGPTGRVDQISPEDWDRTLAVDITGHFNVT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH
RLAVPALKQSDNPSIIGLASAAGRFGFPLRSPYAAAKWGVVGFIKSLAMELGEFGIRANA
HHEHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECE
ILPGSVDGPRIRSVFEHKARERNLSMEEVQAMALSATSLKRLIPPQHLANVAVFLASPLG
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
STISGQAIAVDGDLQMLV
CCCCCCEEEECCCEEECC
>Mature Secondary Structure
MDLGITGIRVIITAGAGGIGLEIARAFAREGARIEVCDVDQAALDDLPQSAPGVTGSVCD
CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCHHHH
VADRAAVQRFMDGALGRLGGLDVLVNNAGIAGPTGRVDQISPEDWDRTLAVDITGHFNVT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH
RLAVPALKQSDNPSIIGLASAAGRFGFPLRSPYAAAKWGVVGFIKSLAMELGEFGIRANA
HHEHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECE
ILPGSVDGPRIRSVFEHKARERNLSMEEVQAMALSATSLKRLIPPQHLANVAVFLASPLG
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
STISGQAIAVDGDLQMLV
CCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]