| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244380
Identifier: 154244380
GI number: 154244380
Start: 454630
End: 456063
Strand: Direct
Name: 154244380
Synonym: Xaut_0423
Alternate gene names: NA
Gene position: 454630-456063 (Clockwise)
Preceding gene: 154244379
Following gene: 154244388
Centisome position: 8.56
GC content: 62.55
Gene sequence:
>1434_bases ATGAGGTTAACGCGCCGTGAAGCGGCATTCGGTGGGCTGGGATTGTTGGCTTCCCTGGGGTTACCATCCGCAGCGTCAGC TTGGGACGGTCTTGTTACGGATCTCGTGGAGGGGGTCGAGGACTTCAAGATCGCCTCCGACGCCTACGTCTACGGCTATC CGCTCGTTACGATGGAGATGACCCGGCGCGTCATCACCAATGTCGTGAAGCCGGAAGGCACCCGGGCGCCCATGGGGCAG CTCATCAAGCTGCGTTCCTACCCGGATGCTGCGTTCCGCGACGTGACCGCGCCGAACGCGGATACGCTCTACACCACCTC CTTCTTCGATGTGGGCGCCGAGCCCTGGGTGCTGAGCGTTCCCGATATGAAGGACCGCTATTTCCTCCTGCCCCTGCTCA GCGGTTGGACCGACGTGTTCGAGGTTCCCGGAAAGCGCACCACCGGGACCGGGCCGCAGACCTACCTGATCTCGGGGCCG AACTGGAGCGGGCCGGTACCGGCGGGGATGAAGCAGCTCAAGTCACCGACCAGCCTGGTGTGGCTGCTGGGGCGCATCTA CTGTTCCGGCACGCCTGAGGACTATGCCGCGGTGCATGCGCTTCAGGACCAGTTCAAGCTTTATCCGCTCAGCGCCTATG GCAAGGACTGGACCCCGCCCGAGGGCAAGGTGGATCCGGCCATCGACATGAAGACGGCGGTTCGCGAGCAGGTGAACAAG CTCACCGCCACCGAGTATTTCACGTTGCTCGCAGAATTGATGAAGACCAACCCTCCGGCGCCGAAGGATGGCCCCGCCAT CGCGCGCTTCGCGAAGATCGGGCTGGTGCCGGGCAAGAGCTTCGACGGCAAGGCGATCGACGCCCGGTGGGAAAAGCGGC TGCCGCAGGTCTCGTTCGATCGCATCATGATGCACTTCAAGTTCAGCGATGGCGACATCCAGCTTATCAATGGCTGGGGC TTCTCGACGAAGACCGGCCTCTATGGCACCAACTACATCCAGCGCGCGCTCATTACCGCCATCGGCCTTGGCGCCAACCG CCCGCAGGATGCGGTCTATCCCACGTCGCTGAAGCCGGCGGCCGGAGGGTCCTACGAGGGCTCGAACAAATATGTGCTGC GCTTTCCGAAGGGTCAGCTCCCCCCGGTGAAAGGGTTCTGGTCGCTGACCATGTATGACGAGGATTATTTCTTCGTCGCC AATCCCATCAACCGCTACTCCATGAGCGTCCGCACCAATCCGAAGCTGGAGAAGGACGGCTCCCTGGTCATCTACATCCA GAATGAGTCGCCGGGGGCCGACAAGGAGGCCAATTGGCTGCCGGCGCCGAAGGGCAAGTTCCTGCTCATGCTTCGGCTGT ATTGGCCGGACGAGCGGAAGCCCTCCATTCTCGACGGTTCGTGGACGATCCCGGCGGTCACCAAGGTCGGTTAG
Upstream 100 bases:
>100_bases AGGGCGCCGCTACCTCCATGTAAAAATGGGTTCCGGCTGCCTTGGTTCAGTCTCTTTTTCTGCGCATTCCCACGGATGTA TTGAATAAATGGAGGGGGCC
Downstream 100 bases:
>100_bases CACGAAGGTGCGGCATGAGGGCGATTGAGGCTTGCCGATTTCGCCCCTCGACCGACGCGCGGGCCTGATCGAAGGCCCGC GCGTCACGCCCGATCACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MRLTRREAAFGGLGLLASLGLPSAASAWDGLVTDLVEGVEDFKIASDAYVYGYPLVTMEMTRRVITNVVKPEGTRAPMGQ LIKLRSYPDAAFRDVTAPNADTLYTTSFFDVGAEPWVLSVPDMKDRYFLLPLLSGWTDVFEVPGKRTTGTGPQTYLISGP NWSGPVPAGMKQLKSPTSLVWLLGRIYCSGTPEDYAAVHALQDQFKLYPLSAYGKDWTPPEGKVDPAIDMKTAVREQVNK LTATEYFTLLAELMKTNPPAPKDGPAIARFAKIGLVPGKSFDGKAIDARWEKRLPQVSFDRIMMHFKFSDGDIQLINGWG FSTKTGLYGTNYIQRALITAIGLGANRPQDAVYPTSLKPAAGGSYEGSNKYVLRFPKGQLPPVKGFWSLTMYDEDYFFVA NPINRYSMSVRTNPKLEKDGSLVIYIQNESPGADKEANWLPAPKGKFLLMLRLYWPDERKPSILDGSWTIPAVTKVG
Sequences:
>Translated_477_residues MRLTRREAAFGGLGLLASLGLPSAASAWDGLVTDLVEGVEDFKIASDAYVYGYPLVTMEMTRRVITNVVKPEGTRAPMGQ LIKLRSYPDAAFRDVTAPNADTLYTTSFFDVGAEPWVLSVPDMKDRYFLLPLLSGWTDVFEVPGKRTTGTGPQTYLISGP NWSGPVPAGMKQLKSPTSLVWLLGRIYCSGTPEDYAAVHALQDQFKLYPLSAYGKDWTPPEGKVDPAIDMKTAVREQVNK LTATEYFTLLAELMKTNPPAPKDGPAIARFAKIGLVPGKSFDGKAIDARWEKRLPQVSFDRIMMHFKFSDGDIQLINGWG FSTKTGLYGTNYIQRALITAIGLGANRPQDAVYPTSLKPAAGGSYEGSNKYVLRFPKGQLPPVKGFWSLTMYDEDYFFVA NPINRYSMSVRTNPKLEKDGSLVIYIQNESPGADKEANWLPAPKGKFLLMLRLYWPDERKPSILDGSWTIPAVTKVG >Mature_477_residues MRLTRREAAFGGLGLLASLGLPSAASAWDGLVTDLVEGVEDFKIASDAYVYGYPLVTMEMTRRVITNVVKPEGTRAPMGQ LIKLRSYPDAAFRDVTAPNADTLYTTSFFDVGAEPWVLSVPDMKDRYFLLPLLSGWTDVFEVPGKRTTGTGPQTYLISGP NWSGPVPAGMKQLKSPTSLVWLLGRIYCSGTPEDYAAVHALQDQFKLYPLSAYGKDWTPPEGKVDPAIDMKTAVREQVNK LTATEYFTLLAELMKTNPPAPKDGPAIARFAKIGLVPGKSFDGKAIDARWEKRLPQVSFDRIMMHFKFSDGDIQLINGWG FSTKTGLYGTNYIQRALITAIGLGANRPQDAVYPTSLKPAAGGSYEGSNKYVLRFPKGQLPPVKGFWSLTMYDEDYFFVA NPINRYSMSVRTNPKLEKDGSLVIYIQNESPGADKEANWLPAPKGKFLLMLRLYWPDERKPSILDGSWTIPAVTKVG
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52714; Mature: 52714
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTRREAAFGGLGLLASLGLPSAASAWDGLVTDLVEGVEDFKIASDAYVYGYPLVTMEM CCCCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEHHHHH TRRVITNVVKPEGTRAPMGQLIKLRSYPDAAFRDVTAPNADTLYTTSFFDVGAEPWVLSV HHHHHHHHCCCCCCCCCHHHHEEECCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCEEEEC PDMKDRYFLLPLLSGWTDVFEVPGKRTTGTGPQTYLISGPNWSGPVPAGMKQLKSPTSLV CCCCCCEEEEEHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHH WLLGRIYCSGTPEDYAAVHALQDQFKLYPLSAYGKDWTPPEGKVDPAIDMKTAVREQVNK HHHHHHHCCCCCHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LTATEYFTLLAELMKTNPPAPKDGPAIARFAKIGLVPGKSFDGKAIDARWEKRLPQVSFD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHCCCCCCCC RIMMHFKFSDGDIQLINGWGFSTKTGLYGTNYIQRALITAIGLGANRPQDAVYPTSLKPA EEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AGGSYEGSNKYVLRFPKGQLPPVKGFWSLTMYDEDYFFVANPINRYSMSVRTNPKLEKDG CCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCC SLVIYIQNESPGADKEANWLPAPKGKFLLMLRLYWPDERKPSILDGSWTIPAVTKVG CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCCEEECCC >Mature Secondary Structure MRLTRREAAFGGLGLLASLGLPSAASAWDGLVTDLVEGVEDFKIASDAYVYGYPLVTMEM CCCCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEHHHHH TRRVITNVVKPEGTRAPMGQLIKLRSYPDAAFRDVTAPNADTLYTTSFFDVGAEPWVLSV HHHHHHHHCCCCCCCCCHHHHEEECCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCEEEEC PDMKDRYFLLPLLSGWTDVFEVPGKRTTGTGPQTYLISGPNWSGPVPAGMKQLKSPTSLV CCCCCCEEEEEHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHH WLLGRIYCSGTPEDYAAVHALQDQFKLYPLSAYGKDWTPPEGKVDPAIDMKTAVREQVNK HHHHHHHCCCCCHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LTATEYFTLLAELMKTNPPAPKDGPAIARFAKIGLVPGKSFDGKAIDARWEKRLPQVSFD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHCCCCCCCC RIMMHFKFSDGDIQLINGWGFSTKTGLYGTNYIQRALITAIGLGANRPQDAVYPTSLKPA EEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AGGSYEGSNKYVLRFPKGQLPPVKGFWSLTMYDEDYFFVANPINRYSMSVRTNPKLEKDG CCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCC SLVIYIQNESPGADKEANWLPAPKGKFLLMLRLYWPDERKPSILDGSWTIPAVTKVG CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA