| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244217
Identifier: 154244217
GI number: 154244217
Start: 264470
End: 265906
Strand: Reverse
Name: 154244217
Synonym: Xaut_0260
Alternate gene names: NA
Gene position: 265906-264470 (Counterclockwise)
Preceding gene: 154244218
Following gene: 154244216
Centisome position: 5.01
GC content: 61.17
Gene sequence:
>1437_bases ATGAAGTCACTTCTCACACTTGCCATTCTGGCGTCGACCGCGATCCCGGCCTTTGCCGGTCAGGCGCCCGGATCCGCCGA AGCGCCCGACATCGCGGTCAGCAGCCGCGACCGGTTCTACACCTCCGACCAATTCTCCAACACCGTCTCGGTTGTCGATC CCTCCACCAACGAGGTTCTCGGTGTGATCAAGCTGGGCGAGCAGACCCCGGCCAATTTGAGCCCGCTTTATCGCGGGCAA CTCCTCGTCCACGGCATGGGCTTCTCCCCCGATCACAAGACCCTCGCCGTCATCTCGATCGGCTCCAATTCGGTCAGCTT TATCGATACCGAGTCGAATGCGGTCAAACACGTGACCTATGTTGGGCGCTCGCCGCACGAAGCGTTCTTCCGCCCGGACG GCAAGGAAGTCTGGGTGAGCGTTCGCGGGGAAAACTATATCTCGGTTCTCGACGGACAGAGCTTCACCGAAACCGGCCGG ATCACGGTTCCGAACGGTCCGGGCATGACGATCTTTTCTCCTGACGGACGCTATGGCTATGTCTGCTCGAGTTTCAGCCC TGAAACGGTCGTCATCGACACGGCGACCAAGGAGATCGTCGGACGGGTCAAGCAGGAAAGTCCGTTTTGCCCGGACATCG CAGCCACGCCCGACGGGCGCCAAGTTTGGCTGACCCTGAAGGATGTCGGCAAGGTCATGGTGTTTGACGCCAAGCCTCCG TTCTCCGTGTTCAAGGTCATCGATACGGGACCGATCACCAATCATGTCAACATTGTTCGCAATCCCAAGGGCCAATTCGC CTATGTCACGATTGGCGGCCTGAACGAAATCAAGGTATTCGACACCTCGGACTACAAGCAGGTTGCGACCATCCCGGTCG GGTCGCTGCCACACGGCTTGTGGCCGTCGGGGGATGGCAGCCGCGTCTATGTTGGTCTCGAGAATGCCGACGCTGCCACA GTCATCGATACGGCGACCAACAAAGTGATCGCCACGATCCCGATAGGTCAGGCGCCGCAGGGCGTCGCCTATGTTCCCAA CGCGGTCGAGAAGGGCGATGGCCGCGCCAACCTCCAGCCGCTCGCCGCAGCCAACAAGCCGACGCAACTGGTCTTGACCG GGATCAATGGAAAGGGTGTGACCCAGGTTTCGCTGTTTGACCAGGGGCTCGTTCAGGTTCTCCAGGCGGCGGCGACCGGC CTGGAGCCGAAGAAGCCCTATGTTCTGGCCCTTTCGCGTGACGCCGAGGGACAGGGCGCTCTTGAGCCGCTCGCCAATTT CATGAGCAATCCCGCCGGCGCGGCGATCGTCAATGCGGTTGGCCCGCTGCGCACGTCTGTCGAGACCGGCGATGCCTCTG CGCGGCGATATCTTGTGATTGCGGAGGGCGCGGGCGCCAAGCCGGGCGCAATTGTGCAAGTTCAGAAACTCCAATAG
Upstream 100 bases:
>100_bases CGGTGATGCGGAAGATCCTCAGCGAGCCGACCTCAGCATCGACCGCAAAGCCCTGATCGCACCATTCCCAAAACTCAATC CTAAAACGAAGGAAACGGTC
Downstream 100 bases:
>100_bases TTGCTAATCGTTCGCTTTTGCCGAACGGAACGACGAAACTAATGCGTTGGATCGATTGATCGGACTCATCCATCTTCTCC CAAGAACGAAACGCAGCGGC
Product: YVTN beta-propeller repeat-containing protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; Cell Surface Protein; YVTN Family Beta-Propeller Repeat Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Beta-Propeller Fold Protein; Surface Antigen; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; IPT/TIG Domain Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Signal Peptide; Beta-Propeller Repeat Protein YVTN Family; Surface Antigen-Like Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; Cytochrome D1 Heme Region; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; SGL Domain-Containing Protein; Secreted Protein; Lipoprotein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MKSLLTLAILASTAIPAFAGQAPGSAEAPDIAVSSRDRFYTSDQFSNTVSVVDPSTNEVLGVIKLGEQTPANLSPLYRGQ LLVHGMGFSPDHKTLAVISIGSNSVSFIDTESNAVKHVTYVGRSPHEAFFRPDGKEVWVSVRGENYISVLDGQSFTETGR ITVPNGPGMTIFSPDGRYGYVCSSFSPETVVIDTATKEIVGRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKPP FSVFKVIDTGPITNHVNIVRNPKGQFAYVTIGGLNEIKVFDTSDYKQVATIPVGSLPHGLWPSGDGSRVYVGLENADAAT VIDTATNKVIATIPIGQAPQGVAYVPNAVEKGDGRANLQPLAAANKPTQLVLTGINGKGVTQVSLFDQGLVQVLQAAATG LEPKKPYVLALSRDAEGQGALEPLANFMSNPAGAAIVNAVGPLRTSVETGDASARRYLVIAEGAGAKPGAIVQVQKLQ
Sequences:
>Translated_478_residues MKSLLTLAILASTAIPAFAGQAPGSAEAPDIAVSSRDRFYTSDQFSNTVSVVDPSTNEVLGVIKLGEQTPANLSPLYRGQ LLVHGMGFSPDHKTLAVISIGSNSVSFIDTESNAVKHVTYVGRSPHEAFFRPDGKEVWVSVRGENYISVLDGQSFTETGR ITVPNGPGMTIFSPDGRYGYVCSSFSPETVVIDTATKEIVGRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKPP FSVFKVIDTGPITNHVNIVRNPKGQFAYVTIGGLNEIKVFDTSDYKQVATIPVGSLPHGLWPSGDGSRVYVGLENADAAT VIDTATNKVIATIPIGQAPQGVAYVPNAVEKGDGRANLQPLAAANKPTQLVLTGINGKGVTQVSLFDQGLVQVLQAAATG LEPKKPYVLALSRDAEGQGALEPLANFMSNPAGAAIVNAVGPLRTSVETGDASARRYLVIAEGAGAKPGAIVQVQKLQ >Mature_478_residues MKSLLTLAILASTAIPAFAGQAPGSAEAPDIAVSSRDRFYTSDQFSNTVSVVDPSTNEVLGVIKLGEQTPANLSPLYRGQ LLVHGMGFSPDHKTLAVISIGSNSVSFIDTESNAVKHVTYVGRSPHEAFFRPDGKEVWVSVRGENYISVLDGQSFTETGR ITVPNGPGMTIFSPDGRYGYVCSSFSPETVVIDTATKEIVGRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKPP FSVFKVIDTGPITNHVNIVRNPKGQFAYVTIGGLNEIKVFDTSDYKQVATIPVGSLPHGLWPSGDGSRVYVGLENADAAT VIDTATNKVIATIPIGQAPQGVAYVPNAVEKGDGRANLQPLAAANKPTQLVLTGINGKGVTQVSLFDQGLVQVLQAAATG LEPKKPYVLALSRDAEGQGALEPLANFMSNPAGAAIVNAVGPLRTSVETGDASARRYLVIAEGAGAKPGAIVQVQKLQ
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50299; Mature: 50299
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLTLAILASTAIPAFAGQAPGSAEAPDIAVSSRDRFYTSDQFSNTVSVVDPSTNEVL CCHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCCCEE GVIKLGEQTPANLSPLYRGQLLVHGMGFSPDHKTLAVISIGSNSVSFIDTESNAVKHVTY EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEE VGRSPHEAFFRPDGKEVWVSVRGENYISVLDGQSFTETGRITVPNGPGMTIFSPDGRYGY ECCCCCHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEECCCCCCEEEECCCCCEEE VCSSFSPETVVIDTATKEIVGRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKPP EECCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCEEEEEECCCC FSVFKVIDTGPITNHVNIVRNPKGQFAYVTIGGLNEIKVFDTSDYKQVATIPVGSLPHGL CEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCC WPSGDGSRVYVGLENADAATVIDTATNKVIATIPIGQAPQGVAYVPNAVEKGDGRANLQP CCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCEECCCHHHCCCCCCCCCE LAAANKPTQLVLTGINGKGVTQVSLFDQGLVQVLQAAATGLEPKKPYVLALSRDAEGQGA EECCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC LEPLANFMSNPAGAAIVNAVGPLRTSVETGDASARRYLVIAEGAGAKPGAIVQVQKLQ HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure MKSLLTLAILASTAIPAFAGQAPGSAEAPDIAVSSRDRFYTSDQFSNTVSVVDPSTNEVL CCHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCCCEE GVIKLGEQTPANLSPLYRGQLLVHGMGFSPDHKTLAVISIGSNSVSFIDTESNAVKHVTY EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEE VGRSPHEAFFRPDGKEVWVSVRGENYISVLDGQSFTETGRITVPNGPGMTIFSPDGRYGY ECCCCCHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEECCCCCCEEEECCCCCEEE VCSSFSPETVVIDTATKEIVGRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKPP EECCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCEEEEEECCCC FSVFKVIDTGPITNHVNIVRNPKGQFAYVTIGGLNEIKVFDTSDYKQVATIPVGSLPHGL CEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCC WPSGDGSRVYVGLENADAATVIDTATNKVIATIPIGQAPQGVAYVPNAVEKGDGRANLQP CCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCEECCCHHHCCCCCCCCCE LAAANKPTQLVLTGINGKGVTQVSLFDQGLVQVLQAAATGLEPKKPYVLALSRDAEGQGA EECCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC LEPLANFMSNPAGAAIVNAVGPLRTSVETGDASARRYLVIAEGAGAKPGAIVQVQKLQ HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA