| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yhiI [H]
Identifier: 154244169
GI number: 154244169
Start: 213966
End: 214961
Strand: Reverse
Name: yhiI [H]
Synonym: Xaut_0211
Alternate gene names: 154244169
Gene position: 214961-213966 (Counterclockwise)
Preceding gene: 154244170
Following gene: 154244168
Centisome position: 4.05
GC content: 70.48
Gene sequence:
>996_bases ATGAAGCGTACGCTTGTGATCCTGCTGGCCCTCCTTGCCGTCGTCGGCGCCGGGGGCGCGGGCGCCTGGTACATGGCAAG CCGCAGCCGCGCCCTGCCGCCGGGCTTCGCATATGGCAACGGCCGCATCGAGGCGACGCAGGTGGATGTGGCTACCAAGG CCGCCGGCCGCGTGCTCGACGTGCTCGCGGAGGAAGGCGACTTCGTCCATCAGGGAGAGGTGGTGGCCCATATGGATGTG GCCGAGACCGCCGCCGCCCTGCGCACCGCCGATGCGCAGGCGAGCCAGGCCCGCCAGTCCCGCGACACCGCTTTCCACGT GGTGGAGCAGCGCAAGGGCGAGCTGGACCTCGCCGCCAAGGAGCTGGAGCGGCAGGAGACCCTTGTCGCCAAGGGCTTCG CCACCGAGCAGAAGGTGGATCAATACCGCACCACCAAGCTGACCGCGCAGGCGGCGCTGGCCGCGGCCCAGAGCAGCCTC GCAGCGAGCGAATCCGCCATCCGCGCCGCCGAGGCCGAGGTGGAGCGCCTGACCCGCATGGTGGACGACGGCACCCTCAC GGCGCCGAAGTCCGGCCGCGTCATCTACCGCCTCGCCGAGCCCGGCGAGGTGCTGGGCGCGGGCGGCAAGGTCCTCACCT TCATCGACCTTTCCGATGTCTACATGACCATCTTCCTGCCCGCCTCGGACGCCGGCGCCATCACCCTCGGCGCCGAGGCG CGGCTGCTGCTGGAACCTTTGCCCGACCGCGCCGTGCCGGCCGCCGTCTCGTTCGTGTCGGCGCGGGCGCAGTTCACCCC CAAGCAGGTGGAAACCCAGCGCGAGCGCGACCGCATGATGTTCCGCGTGAAGCTGCGCGTGGCCCGTCCGCTGGTGGAAA AATACCTGGAGCAGGTGAAGACCGGCGTGACCGGCGTCGGCTATGTGCGGATGGATCCCAAGGCGCAATGGCCCACCTGG CTCCAGTCCGACCTCGTGGGCGAGGCCGCCAAGTGA
Upstream 100 bases:
>100_bases CCGAAGCCCCGCGGGAGTGGCCTGCTGTGGCATCCCCTTGCCGGCACCTTTCCGCAGGACCTTCCGCGGGCGCGTCTGCA CGCCGAAAAGGTGTCCTGTC
Downstream 100 bases:
>100_bases GCGAAGTGCCGGTGAGCGAAGGACCGGTGAGCGAGAAGCCGGTGAGCGAGGCGATAGCGGGCGCCGCCATCCATCTGGCC GGCATCCGCCACCTCTATGG
Product: secretion protein HlyD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKRTLVILLALLAVVGAGGAGAWYMASRSRALPPGFAYGNGRIEATQVDVATKAAGRVLDVLAEEGDFVHQGEVVAHMDV AETAAALRTADAQASQARQSRDTAFHVVEQRKGELDLAAKELERQETLVAKGFATEQKVDQYRTTKLTAQAALAAAQSSL AASESAIRAAEAEVERLTRMVDDGTLTAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDVYMTIFLPASDAGAITLGAEA RLLLEPLPDRAVPAAVSFVSARAQFTPKQVETQRERDRMMFRVKLRVARPLVEKYLEQVKTGVTGVGYVRMDPKAQWPTW LQSDLVGEAAK
Sequences:
>Translated_331_residues MKRTLVILLALLAVVGAGGAGAWYMASRSRALPPGFAYGNGRIEATQVDVATKAAGRVLDVLAEEGDFVHQGEVVAHMDV AETAAALRTADAQASQARQSRDTAFHVVEQRKGELDLAAKELERQETLVAKGFATEQKVDQYRTTKLTAQAALAAAQSSL AASESAIRAAEAEVERLTRMVDDGTLTAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDVYMTIFLPASDAGAITLGAEA RLLLEPLPDRAVPAAVSFVSARAQFTPKQVETQRERDRMMFRVKLRVARPLVEKYLEQVKTGVTGVGYVRMDPKAQWPTW LQSDLVGEAAK >Mature_331_residues MKRTLVILLALLAVVGAGGAGAWYMASRSRALPPGFAYGNGRIEATQVDVATKAAGRVLDVLAEEGDFVHQGEVVAHMDV AETAAALRTADAQASQARQSRDTAFHVVEQRKGELDLAAKELERQETLVAKGFATEQKVDQYRTTKLTAQAALAAAQSSL AASESAIRAAEAEVERLTRMVDDGTLTAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDVYMTIFLPASDAGAITLGAEA RLLLEPLPDRAVPAAVSFVSARAQFTPKQVETQRERDRMMFRVKLRVARPLVEKYLEQVKTGVTGVGYVRMDPKAQWPTW LQSDLVGEAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=342, Percent_Identity=44.1520467836257, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1787013, Length=291, Percent_Identity=25.7731958762887, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 35592; Mature: 35592
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLVILLALLAVVGAGGAGAWYMASRSRALPPGFAYGNGRIEATQVDVATKAAGRVLD CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCEEEEEEEEHHHHHHHHHHH VLAEEGDFVHQGEVVAHMDVAETAAALRTADAQASQARQSRDTAFHVVEQRKGELDLAAK HHHCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ELERQETLVAKGFATEQKVDQYRTTKLTAQAALAAAQSSLAASESAIRAAEAEVERLTRM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDDGTLTAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDVYMTIFLPASDAGAITLGAEA HCCCCEECCCCCCEEEEECCCCCEECCCCCEEEEEEECCEEEEEEEECCCCCEEEECCCC RLLLEPLPDRAVPAAVSFVSARAQFTPKQVETQRERDRMMFRVKLRVARPLVEKYLEQVK EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVTGVGYVRMDPKAQWPTWLQSDLVGEAAK CCCCEEEEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKRTLVILLALLAVVGAGGAGAWYMASRSRALPPGFAYGNGRIEATQVDVATKAAGRVLD CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCEEEEEEEEHHHHHHHHHHH VLAEEGDFVHQGEVVAHMDVAETAAALRTADAQASQARQSRDTAFHVVEQRKGELDLAAK HHHCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ELERQETLVAKGFATEQKVDQYRTTKLTAQAALAAAQSSLAASESAIRAAEAEVERLTRM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDDGTLTAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDVYMTIFLPASDAGAITLGAEA HCCCCEECCCCCCEEEEECCCCCEECCCCCEEEEEEECCEEEEEEEECCCCCEEEECCCC RLLLEPLPDRAVPAAVSFVSARAQFTPKQVETQRERDRMMFRVKLRVARPLVEKYLEQVK EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVTGVGYVRMDPKAQWPTWLQSDLVGEAAK CCCCEEEEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]