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The map label for this gene is yjeB [C]

Identifier: 154244166

GI number: 154244166

Start: 209554

End: 210000

Strand: Direct

Name: yjeB [C]

Synonym: Xaut_0208

Alternate gene names: 154244166

Gene position: 209554-210000 (Clockwise)

Preceding gene: 154244165

Following gene: 154244172

Centisome position: 3.95

GC content: 63.98

Gene sequence:

>447_bases
ATGCTGACGAAAAAAGGTAAGTATGGTCTCAAGGCGGCGGTCCACCTGGCCCGCCTTCCGCCCGGTGCGTCCACGCAGGT
GGCCGACATCGCCGAGGCCAACAACATCCCGAAGAAATTCCTGGACGTCATCCTTGGCGAATTGCGTAACGCCGGCTTCC
TGTCCTCCAAGAAGGGCAAGCTGGGTGGCTACCGCCTCGCCAGGGCGCCGGAGGAAATCGTGGTCGGCGAGATGATCCGT
GCCCTCGACGGACCGCTCGCGCCGTTCGCCTGCGCCAGCCGCAACGCCTACGAGCAATGCGAGGACTGCGATGTCGCCAC
CTGCGAGGTGCGCATGCTCATGGTTCAGGTGCGCGACGCCATCGGCACCGTGCTCGACACCTACACCCTCGCCCAGATGC
GCGATCTCTCGCGGGAAGCCCTGTCCTCGTTCGTGGACTATATCTGA

Upstream 100 bases:

>100_bases
GACTGATGCGCCGCCCCGGCCTTTCGCGCCCCGGTTTTACACGCGCCTGCCGGTTGACTGAGGCTTCGCACATCCGCATA
AGCCCGAAAGAGGGCCCAGC

Downstream 100 bases:

>100_bases
GCGGGGCTGCCGCCCGTCTCTTATTGCTGGGCGGCGAGGAAGACGCGGAAGCGCGCCAGCGCCACAGCGAAGAACAGCAC
GCCCATGCCGAAGGTGGCCG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLTKKGKYGLKAAVHLARLPPGASTQVADIAEANNIPKKFLDVILGELRNAGFLSSKKGKLGGYRLARAPEEIVVGEMIR
ALDGPLAPFACASRNAYEQCEDCDVATCEVRMLMVQVRDAIGTVLDTYTLAQMRDLSREALSSFVDYI

Sequences:

>Translated_148_residues
MLTKKGKYGLKAAVHLARLPPGASTQVADIAEANNIPKKFLDVILGELRNAGFLSSKKGKLGGYRLARAPEEIVVGEMIR
ALDGPLAPFACASRNAYEQCEDCDVATCEVRMLMVQVRDAIGTVLDTYTLAQMRDLSREALSSFVDYI
>Mature_148_residues
MLTKKGKYGLKAAVHLARLPPGASTQVADIAEANNIPKKFLDVILGELRNAGFLSSKKGKLGGYRLARAPEEIVVGEMIR
ALDGPLAPFACASRNAYEQCEDCDVATCEVRMLMVQVRDAIGTVLDTYTLAQMRDLSREALSSFVDYI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=133, Percent_Identity=29.3233082706767, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16094; Mature: 16094

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKKGKYGLKAAVHLARLPPGASTQVADIAEANNIPKKFLDVILGELRNAGFLSSKKGK
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
LGGYRLARAPEEIVVGEMIRALDGPLAPFACASRNAYEQCEDCDVATCEVRMLMVQVRDA
CCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH
IGTVLDTYTLAQMRDLSREALSSFVDYI
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTKKGKYGLKAAVHLARLPPGASTQVADIAEANNIPKKFLDVILGELRNAGFLSSKKGK
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
LGGYRLARAPEEIVVGEMIRALDGPLAPFACASRNAYEQCEDCDVATCEVRMLMVQVRDA
CCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH
IGTVLDTYTLAQMRDLSREALSSFVDYI
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]