| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is uxaB [H]
Identifier: 154244131
GI number: 154244131
Start: 170122
End: 171273
Strand: Direct
Name: uxaB [H]
Synonym: Xaut_0173
Alternate gene names: 154244131
Gene position: 170122-171273 (Clockwise)
Preceding gene: 154244129
Following gene: 154244132
Centisome position: 3.2
GC content: 70.57
Gene sequence:
>1152_bases GTGAGCGGACGCATCATCCAGTTCGGCACCAGCCGGTTTCTCCAGGCCCATGTGGACCTGTTCGTCCATGAGGCGCGACA GGCCGGTCAGGCGGTCGGCCCCATCTGCATCGTGCAGGCTTCCGGCGCGGCGGACCGGGCCGGCCGCGTCGCCGCCTTCG GTCGGCCCGGCGGCTATCCGGTGATCATCCGCGGCATCGAGAAGGGCGAGCGCATCGAGCGCCGCATCGATGTCACCAGC GTCGACCGCGGCCTTTCCGCCGCGCAGGACTGGCAGGCCCTGTCCGACCTGTTCGCGAAAGATGCGGACATCATCGTCTC CAACACCGCCGATGCGGGCTACGAGATCGCCGCCGCCGATCGCGGCCCGGCGCTGCTGGCCGGCGGTGTGCCCGTGTCGT TTCCCGGCAAGCTCACGGCGCTGCTCCATCGCCGCTGGCGCCAGTCCGGGCGCGGGCTCACCGTGCTGCCGTGCGAACTC ATCAACCGCAACGGCCGGGTGCTCAGTGCCGCCGTCGCCGCCCTCGCCCCCGAGGCGGGGGCGCCGGAGGCTTTCCTCGC GTGGCTTGAGGCCGAGGTGATCTTCGCCGACACGCTGGTGGACCGCATCGTCTCGCAGGCGCTCGAGCCCATCGGCGCCG TGGCCGAGCCCTACGCCCTTTGGGTGATCGAGCGCCGGCCGGGACTTGATCTGCCCTTCACCCATCCGAGCGTGGTGCTG GCGGACGACCTGGAGCCGTTCGAGCGGCTGAAGCTGCATATCCTCAACCTGGGCCACACGGTGCTTGCCGACATCTGGCG CTCCGAGCGGCGGGATCCGGGCGAGACGGTGCGGGAGATCCTCGCCGATGCCGACGTGCGCGGCCGTCTCGACGACGTGT ACCGCCATGAAGTGCTGCCGGGATTTGCCGCCCACGGCATGGGCGAGGAGGCGCAGCGCTATGTGGCCACCACGCTGGAG CGCTTCCTCAACCCGTTCCTCGACCACCGCATCGCCGACATCGCCCAGAACCACGCCACCAAGGTGGACCGGCGCATCAC CGCCTTCCTGTCCTGGTGGGCGGAGGCTGGGGCCGTGGGTGCCACCCCGACCCTCGACGTGGTGATCGCACGGCGGCAGT TCCAGCCTCAGACCGAGCGGAGCGAGGCATGA
Upstream 100 bases:
>100_bases AAGAGAAAAACGAGGGAGGAAGGCAGATGAGCCATGGTCGGCTGCCATGGCCGCGTGCTCTGCCGGAGCTTCCTCGCGCT GGATCTAAAAGGATTTACGC
Downstream 100 bases:
>100_bases CCTACCAGTTCGATTTCGCGGCGCTCCTGCCCTACTGGCGCGAGTTCGCCATGGGGGTGTGGCTGACGCTGCAATTGTCC TTCGTCGCCACGGTGCTGGG
Product: mannitol dehydrogenase domain-containing protein
Products: NA
Alternate protein names: Tagaturonate dehydrogenase; Tagaturonate reductase [H]
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSGRIIQFGTSRFLQAHVDLFVHEARQAGQAVGPICIVQASGAADRAGRVAAFGRPGGYPVIIRGIEKGERIERRIDVTS VDRGLSAAQDWQALSDLFAKDADIIVSNTADAGYEIAAADRGPALLAGGVPVSFPGKLTALLHRRWRQSGRGLTVLPCEL INRNGRVLSAAVAALAPEAGAPEAFLAWLEAEVIFADTLVDRIVSQALEPIGAVAEPYALWVIERRPGLDLPFTHPSVVL ADDLEPFERLKLHILNLGHTVLADIWRSERRDPGETVREILADADVRGRLDDVYRHEVLPGFAAHGMGEEAQRYVATTLE RFLNPFLDHRIADIAQNHATKVDRRITAFLSWWAEAGAVGATPTLDVVIARRQFQPQTERSEA
Sequences:
>Translated_383_residues MSGRIIQFGTSRFLQAHVDLFVHEARQAGQAVGPICIVQASGAADRAGRVAAFGRPGGYPVIIRGIEKGERIERRIDVTS VDRGLSAAQDWQALSDLFAKDADIIVSNTADAGYEIAAADRGPALLAGGVPVSFPGKLTALLHRRWRQSGRGLTVLPCEL INRNGRVLSAAVAALAPEAGAPEAFLAWLEAEVIFADTLVDRIVSQALEPIGAVAEPYALWVIERRPGLDLPFTHPSVVL ADDLEPFERLKLHILNLGHTVLADIWRSERRDPGETVREILADADVRGRLDDVYRHEVLPGFAAHGMGEEAQRYVATTLE RFLNPFLDHRIADIAQNHATKVDRRITAFLSWWAEAGAVGATPTLDVVIARRQFQPQTERSEA >Mature_382_residues SGRIIQFGTSRFLQAHVDLFVHEARQAGQAVGPICIVQASGAADRAGRVAAFGRPGGYPVIIRGIEKGERIERRIDVTSV DRGLSAAQDWQALSDLFAKDADIIVSNTADAGYEIAAADRGPALLAGGVPVSFPGKLTALLHRRWRQSGRGLTVLPCELI NRNGRVLSAAVAALAPEAGAPEAFLAWLEAEVIFADTLVDRIVSQALEPIGAVAEPYALWVIERRPGLDLPFTHPSVVLA DDLEPFERLKLHILNLGHTVLADIWRSERRDPGETVREILADADVRGRLDDVYRHEVLPGFAAHGMGEEAQRYVATTLER FLNPFLDHRIADIAQNHATKVDRRITAFLSWWAEAGAVGATPTLDVVIARRQFQPQTERSEA
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994885, Length=370, Percent_Identity=30.2702702702703, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1790779, Length=376, Percent_Identity=27.1276595744681, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788497, Length=378, Percent_Identity=27.2486772486773, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787823, Length=237, Percent_Identity=26.5822784810127, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790028, Length=237, Percent_Identity=24.4725738396624, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324401, Length=373, Percent_Identity=23.8605898123324, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320765, Length=373, Percent_Identity=23.8605898123324, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.58 [H]
Molecular weight: Translated: 41780; Mature: 41649
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRIIQFGTSRFLQAHVDLFVHEARQAGQAVGPICIVQASGAADRAGRVAAFGRPGGYP CCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCE VIIRGIEKGERIERRIDVTSVDRGLSAAQDWQALSDLFAKDADIIVSNTADAGYEIAAAD EEEECCCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECC RGPALLAGGVPVSFPGKLTALLHRRWRQSGRGLTVLPCELINRNGRVLSAAVAALAPEAG CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHHHHHHHHCCCCC APEAFLAWLEAEVIFADTLVDRIVSQALEPIGAVAEPYALWVIERRPGLDLPFTHPSVVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEE ADDLEPFERLKLHILNLGHTVLADIWRSERRDPGETVREILADADVRGRLDDVYRHEVLP ECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCC GFAAHGMGEEAQRYVATTLERFLNPFLDHRIADIAQNHATKVDRRITAFLSWWAEAGAVG CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATPTLDVVIARRQFQPQTERSEA CCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SGRIIQFGTSRFLQAHVDLFVHEARQAGQAVGPICIVQASGAADRAGRVAAFGRPGGYP CCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCE VIIRGIEKGERIERRIDVTSVDRGLSAAQDWQALSDLFAKDADIIVSNTADAGYEIAAAD EEEECCCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECC RGPALLAGGVPVSFPGKLTALLHRRWRQSGRGLTVLPCELINRNGRVLSAAVAALAPEAG CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHHHHHHHHCCCCC APEAFLAWLEAEVIFADTLVDRIVSQALEPIGAVAEPYALWVIERRPGLDLPFTHPSVVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEE ADDLEPFERLKLHILNLGHTVLADIWRSERRDPGETVREILADADVRGRLDDVYRHEVLP ECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCC GFAAHGMGEEAQRYVATTLERFLNPFLDHRIADIAQNHATKVDRRITAFLSWWAEAGAVG CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATPTLDVVIARRQFQPQTERSEA CCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]