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The map label for this gene is yqjI [H]

Identifier: 154244122

GI number: 154244122

Start: 160684

End: 161286

Strand: Direct

Name: yqjI [H]

Synonym: Xaut_0164

Alternate gene names: 154244122

Gene position: 160684-161286 (Clockwise)

Preceding gene: 154244119

Following gene: 154244123

Centisome position: 3.03

GC content: 68.33

Gene sequence:

>603_bases
ATGCGCCATGCTGGCGGCCCCGATCGTGGCGACGAATTTGGTGGCCATCGGGGCGGCCATCGCGGTGGCGGGCGCGGCGG
ACGGGGCGGCGGCGACATGTTCCGCATCGGCCGGATGCTGGCGCAGGGCGACCTGAAGCTGCTGGCCCTGTCGCTCATCG
CCGAGCAGCCGCGGCACGGCTACGAGATCATCAAGGTGATCGAGGAGAAGACCGCCGGCTGGTATTCGCCGAGCCCAGGC
GTGGTCTATCCCACCCTCACCTTCCTCGAAGAGGCGGGCTATGTGACCTCCGAGCCCGATGGCGCGAAGAAGCGCTATGC
CATTACTGGGGAAGGCACCGCCTATCTCGCCGAGAACCGCGCCTTCGCTGACGCCATCATCGGGCGCCTGTCGGAGATCG
GCCTCAAGATGGGACGGGTCCGCAAGTGGATGGGGTGGAGCGAGAACGGCCCGAGCCAGGGTGCGGAACTGCCTCGCCTG
GTGGAAGCCGCCCTCGAGAACCTGCGGGACGTGGCCCAGCAGAAGCTGGACGCCAATCGCGGTGCCGAGACGCGGATTGT
CGAGATCCTCGCCCGCGCGGCCAACGACATCCGCGAGGCGTGA

Upstream 100 bases:

>100_bases
GTCGTTGTATCGTACGACATATCTTAGGAGTCGAATAATGTTTGGATGCAGACGTGACGGACACCATGGCGGCGAGCGCC
ACCGGGGTGACTGGGACGAT

Downstream 100 bases:

>100_bases
TGCCAACCCCTGCATGGTCGCGGTTCCCTGAGCCGTGGCCATGCCCGCGCCATCCGGGCGGCGCCTCCTCTTGCCCGCTG
CCGTATCCGCCCTATCGCGC

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRHAGGPDRGDEFGGHRGGHRGGGRGGRGGGDMFRIGRMLAQGDLKLLALSLIAEQPRHGYEIIKVIEEKTAGWYSPSPG
VVYPTLTFLEEAGYVTSEPDGAKKRYAITGEGTAYLAENRAFADAIIGRLSEIGLKMGRVRKWMGWSENGPSQGAELPRL
VEAALENLRDVAQQKLDANRGAETRIVEILARAANDIREA

Sequences:

>Translated_200_residues
MRHAGGPDRGDEFGGHRGGHRGGGRGGRGGGDMFRIGRMLAQGDLKLLALSLIAEQPRHGYEIIKVIEEKTAGWYSPSPG
VVYPTLTFLEEAGYVTSEPDGAKKRYAITGEGTAYLAENRAFADAIIGRLSEIGLKMGRVRKWMGWSENGPSQGAELPRL
VEAALENLRDVAQQKLDANRGAETRIVEILARAANDIREA
>Mature_200_residues
MRHAGGPDRGDEFGGHRGGHRGGGRGGRGGGDMFRIGRMLAQGDLKLLALSLIAEQPRHGYEIIKVIEEKTAGWYSPSPG
VVYPTLTFLEEAGYVTSEPDGAKKRYAITGEGTAYLAENRAFADAIIGRLSEIGLKMGRVRKWMGWSENGPSQGAELPRL
VEAALENLRDVAQQKLDANRGAETRIVEILARAANDIREA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=162, Percent_Identity=34.5679012345679, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 21642; Mature: 21642

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAGGPDRGDEFGGHRGGHRGGGRGGRGGGDMFRIGRMLAQGDLKLLALSLIAEQPRHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
YEIIKVIEEKTAGWYSPSPGVVYPTLTFLEEAGYVTSEPDGAKKRYAITGEGTAYLAENR
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCH
AFADAIIGRLSEIGLKMGRVRKWMGWSENGPSQGAELPRLVEAALENLRDVAQQKLDANR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GAETRIVEILARAANDIREA
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHAGGPDRGDEFGGHRGGHRGGGRGGRGGGDMFRIGRMLAQGDLKLLALSLIAEQPRHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
YEIIKVIEEKTAGWYSPSPGVVYPTLTFLEEAGYVTSEPDGAKKRYAITGEGTAYLAENR
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCH
AFADAIIGRLSEIGLKMGRVRKWMGWSENGPSQGAELPRLVEAALENLRDVAQQKLDANR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GAETRIVEILARAANDIREA
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]