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The map label for this gene is spsC [H]

Identifier: 154244078

GI number: 154244078

Start: 120876

End: 122078

Strand: Direct

Name: spsC [H]

Synonym: Xaut_0120

Alternate gene names: 154244078

Gene position: 120876-122078 (Clockwise)

Preceding gene: 154244077

Following gene: 154244079

Centisome position: 2.28

GC content: 64.84

Gene sequence:

>1203_bases
ATGAGTGACATGGATCTCTTCGACGACGCCGACCTGCCCGCCGACGACGCGGGCGAGGAGGGGACTTCGATCCTGTTGTC
GGATCCCGACATCACCATGATCGAGCTTCAGGCCGTGGCCGAGGCCCTGCAGGCGCCGCGCCTGTCCAGCGGCCCGACCG
CCGAGGCATTCGAGGCGGCGTTCGCCGATTACCTCGGCCGTAAATATGCGGTGGCCGTGCCGAGTGGCACCATGGGCCTG
CTCTACACCCTCAGGGCCTATGGCATCGGTCCGGGCGACGAGGTGATCTGCTCGCCCCATTCCTTCCGGGAGACGGTCCA
CGCCGTGAGCCTGTCGGGCGCGCGGCCGGTGTTCGCGGACATCGATTACTGGGCAGGAACGCTGGTTCCTGAAAAGGCCG
CGGCCAAGATCACCGAGAAGACCAAGGCCATCGTTGCCGGCAATGCCAACGGCCATCCGGCGCCCTGGACCGCCTTCCAG
GAGCTGGCGCGCGCGCACAAGCTCGTCCTCATCGAGGATTCCACCGAGGCCATCGGCTCACGCTACAAGGATGCGCTGGT
TGGGTCGTTCGGCGACACATCCGTGTTCGATTTCTCACAGCCCTTCCCGCTGGTGTGTGGCGAGGGCGGCATGGTGGTGA
CCGACGACATCGACGTGGCGGTGGGGCTGCGGCGCTTCCGAGCCCACCGGCTCGATGAGCGTTCGTCGGTGGTGGTCTCC
ATGAGCGCGCCCTACCAAGGTGCCATGAGCGACGTGACCGCGGCGCTCGGCCTCGCCCAGCTGGGGCGGCTTGAGGAAAT
TCTCGAGCAGCGGCACACGGTGGAGCATCTTTACCAGAAGTACGTCCAGTCGTTCGAGGGCATCAAGGATCCCTTCATCG
GCCCGGACGTGACGGAGGTGAACTGGTTTCTCTACGTGGTGCACCTGGGCACCCGCTTCTCCAAGTCGAGCCGCGATGCC
ATCGTGGACGACCTGAAGGTGGAAAAGGTGGAGTCGGCCGCCTACAGCGCGCCGCTTCATCTGCAGCGTCATTACTTCGA
CCTCGGCTATCGCAAGGGCGACTTCCTCGTGACCGAGAAGGTGGCGGACCGGGCAATCGCCCTGCCGTTCCACACGCACC
TGTCCGAGGACGAAATCGAGTTCATCGTCGCAACGATGAAGGATGCCTCGATCAATGTAGGGGCGGGCGCCGCCATCTAC
TGA

Upstream 100 bases:

>100_bases
CATACGACATCCACCTGCTCGACACCGCCGATCACTGCGCCCACATCACGCTCGATCCCGCGAGCGCGACCGGTGTCATC
CTTGCCCGGCGGAGCGTGTG

Downstream 100 bases:

>100_bases
AGGCAAACAATATTGCACCCAACACAAAAGTTGAAACGACAGGAGCTAATGATGTCCACGGTTACGTTGAAGGTTCTGCC
CGCCGGAAAGACCATCGAAG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSDMDLFDDADLPADDAGEEGTSILLSDPDITMIELQAVAEALQAPRLSSGPTAEAFEAAFADYLGRKYAVAVPSGTMGL
LYTLRAYGIGPGDEVICSPHSFRETVHAVSLSGARPVFADIDYWAGTLVPEKAAAKITEKTKAIVAGNANGHPAPWTAFQ
ELARAHKLVLIEDSTEAIGSRYKDALVGSFGDTSVFDFSQPFPLVCGEGGMVVTDDIDVAVGLRRFRAHRLDERSSVVVS
MSAPYQGAMSDVTAALGLAQLGRLEEILEQRHTVEHLYQKYVQSFEGIKDPFIGPDVTEVNWFLYVVHLGTRFSKSSRDA
IVDDLKVEKVESAAYSAPLHLQRHYFDLGYRKGDFLVTEKVADRAIALPFHTHLSEDEIEFIVATMKDASINVGAGAAIY

Sequences:

>Translated_400_residues
MSDMDLFDDADLPADDAGEEGTSILLSDPDITMIELQAVAEALQAPRLSSGPTAEAFEAAFADYLGRKYAVAVPSGTMGL
LYTLRAYGIGPGDEVICSPHSFRETVHAVSLSGARPVFADIDYWAGTLVPEKAAAKITEKTKAIVAGNANGHPAPWTAFQ
ELARAHKLVLIEDSTEAIGSRYKDALVGSFGDTSVFDFSQPFPLVCGEGGMVVTDDIDVAVGLRRFRAHRLDERSSVVVS
MSAPYQGAMSDVTAALGLAQLGRLEEILEQRHTVEHLYQKYVQSFEGIKDPFIGPDVTEVNWFLYVVHLGTRFSKSSRDA
IVDDLKVEKVESAAYSAPLHLQRHYFDLGYRKGDFLVTEKVADRAIALPFHTHLSEDEIEFIVATMKDASINVGAGAAIY
>Mature_399_residues
SDMDLFDDADLPADDAGEEGTSILLSDPDITMIELQAVAEALQAPRLSSGPTAEAFEAAFADYLGRKYAVAVPSGTMGLL
YTLRAYGIGPGDEVICSPHSFRETVHAVSLSGARPVFADIDYWAGTLVPEKAAAKITEKTKAIVAGNANGHPAPWTAFQE
LARAHKLVLIEDSTEAIGSRYKDALVGSFGDTSVFDFSQPFPLVCGEGGMVVTDDIDVAVGLRRFRAHRLDERSSVVVSM
SAPYQGAMSDVTAALGLAQLGRLEEILEQRHTVEHLYQKYVQSFEGIKDPFIGPDVTEVNWFLYVVHLGTRFSKSSRDAI
VDDLKVEKVESAAYSAPLHLQRHYFDLGYRKGDFLVTEKVADRAIALPFHTHLSEDEIEFIVATMKDASINVGAGAAIY

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=373, Percent_Identity=28.9544235924933, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI2367285, Length=377, Percent_Identity=26.2599469496021, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43424; Mature: 43293

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMDLFDDADLPADDAGEEGTSILLSDPDITMIELQAVAEALQAPRLSSGPTAEAFEAA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHH
FADYLGRKYAVAVPSGTMGLLYTLRAYGIGPGDEVICSPHSFRETVHAVSLSGARPVFAD
HHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEE
IDYWAGTLVPEKAAAKITEKTKAIVAGNANGHPAPWTAFQELARAHKLVLIEDSTEAIGS
CHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHCEEEEEECCHHHHHH
RYKDALVGSFGDTSVFDFSQPFPLVCGEGGMVVTDDIDVAVGLRRFRAHRLDERSSVVVS
HHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEE
MSAPYQGAMSDVTAALGLAQLGRLEEILEQRHTVEHLYQKYVQSFEGIKDPFIGPDVTEV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
NWFLYVVHLGTRFSKSSRDAIVDDLKVEKVESAAYSAPLHLQRHYFDLGYRKGDFLVTEK
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEHH
VADRAIALPFHTHLSEDEIEFIVATMKDASINVGAGAAIY
HHCCEEEEEHHHCCCCCCEEEEEEEECCCCEECCCCCCCC
>Mature Secondary Structure 
SDMDLFDDADLPADDAGEEGTSILLSDPDITMIELQAVAEALQAPRLSSGPTAEAFEAA
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHH
FADYLGRKYAVAVPSGTMGLLYTLRAYGIGPGDEVICSPHSFRETVHAVSLSGARPVFAD
HHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEE
IDYWAGTLVPEKAAAKITEKTKAIVAGNANGHPAPWTAFQELARAHKLVLIEDSTEAIGS
CHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHCEEEEEECCHHHHHH
RYKDALVGSFGDTSVFDFSQPFPLVCGEGGMVVTDDIDVAVGLRRFRAHRLDERSSVVVS
HHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEE
MSAPYQGAMSDVTAALGLAQLGRLEEILEQRHTVEHLYQKYVQSFEGIKDPFIGPDVTEV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
NWFLYVVHLGTRFSKSSRDAIVDDLKVEKVESAAYSAPLHLQRHYFDLGYRKGDFLVTEK
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEHH
VADRAIALPFHTHLSEDEIEFIVATMKDASINVGAGAAIY
HHCCEEEEEHHHCCCCCCEEEEEEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]