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The map label for this gene is fdxB [H]

Identifier: 154244054

GI number: 154244054

Start: 105120

End: 105416

Strand: Direct

Name: fdxB [H]

Synonym: Xaut_0096

Alternate gene names: 154244054

Gene position: 105120-105416 (Clockwise)

Preceding gene: 154244053

Following gene: 154244055

Centisome position: 1.98

GC content: 61.62

Gene sequence:

>297_bases
ATGTCCAACGAAACCCGAGATGGTCGAGCCTGGCAGCCAGACTATTTGCTCGATATCGATGCTGACAAGTGCATCGGTTG
CGGGCGCTGCTTCAAGGTCTGCGGCCGGGACGTGATGACGCTGAAGGGCATCAACGAGGACGGCGAAGTCGTCTCCCTCG
ACGATGACGAGGACGACGAGGTCGAGAAGAAGGTGATGGTCATGAACGACACGGGCGCCTGCATCGGTTGCGGTGCATGC
GCGCGCGTTTGCCCGGCCAACTGCCAGGTTCATGGTCACGAGCAGGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGATGTCGCCAAGAGGGCGCACAGCGCCTTCGCCGAGCTGGAAAAGAAGCGCGCGGACCTGAAGGCACTTGAGGCCGCCT
AACCTGAAGGCTTTTTCGAA

Downstream 100 bases:

>100_bases
TTGCTCCCGCCGATAGCGGATTGGTTTTGAAGCGGAAGGGCGATGGGCTTTGCTCATCGGCCTTTCGCGGACCGCACGGC
GCTTGAGGCAAATCCATTCG

Product: ferredoxin III 4(4Fe-4S) nif-specific

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSNETRDGRAWQPDYLLDIDADKCIGCGRCFKVCGRDVMTLKGINEDGEVVSLDDDEDDEVEKKVMVMNDTGACIGCGAC
ARVCPANCQVHGHEQAAA

Sequences:

>Translated_98_residues
MSNETRDGRAWQPDYLLDIDADKCIGCGRCFKVCGRDVMTLKGINEDGEVVSLDDDEDDEVEKKVMVMNDTGACIGCGAC
ARVCPANCQVHGHEQAAA
>Mature_97_residues
SNETRDGRAWQPDYLLDIDADKCIGCGRCFKVCGRDVMTLKGINEDGEVVSLDDDEDDEVEKKVMVMNDTGACIGCGACA
RVCPANCQVHGHEQAAA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10584; Mature: 10453

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
9.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
12.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNETRDGRAWQPDYLLDIDADKCIGCGRCFKVCGRDVMTLKGINEDGEVVSLDDDEDDE
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCC
VEKKVMVMNDTGACIGCGACARVCPANCQVHGHEQAAA
CCEEEEEECCCCCEEECCCHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SNETRDGRAWQPDYLLDIDADKCIGCGRCFKVCGRDVMTLKGINEDGEVVSLDDDEDDE
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCC
VEKKVMVMNDTGACIGCGACARVCPANCQVHGHEQAAA
CCEEEEEECCCCCEEECCCHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]