| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244053
Identifier: 154244053
GI number: 154244053
Start: 104901
End: 105101
Strand: Direct
Name: 154244053
Synonym: Xaut_0095
Alternate gene names: NA
Gene position: 104901-105101 (Clockwise)
Preceding gene: 154244052
Following gene: 154244054
Centisome position: 1.98
GC content: 59.2
Gene sequence:
>201_bases ATGAGCGACGTGGAAGAACTCAAGGCCGAAATCAAGAAGCTGTCCGCCAAGGCGACGCAGGCAAAAATGGACCTCCACGA TCTGTCCGAGGAACTCCCCATCAGCTGGGAGACGATCATGGATGTCGCCAAGAGGGCGCACAGCGCCTTCGCCGAGCTGG AAAAGAAGCGCGCGGACCTGAAGGCACTTGAGGCCGCCTAA
Upstream 100 bases:
>100_bases CGGCAAGCTTGCCGAGGAGGGGACGAAGTTCGTGTCCTCGGGTGTCGAGATGATCCGGAAGTTTCCGGAAGTGGCCAACT ACTGAAAATCGGGTGCACCC
Downstream 100 bases:
>100_bases CCTGAAGGCTTTTTCGAAATGTCCAACGAAACCCGAGATGGTCGAGCCTGGCAGCCAGACTATTTGCTCGATATCGATGC TGACAAGTGCATCGGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSDVEELKAEIKKLSAKATQAKMDLHDLSEELPISWETIMDVAKRAHSAFAELEKKRADLKALEAA
Sequences:
>Translated_66_residues MSDVEELKAEIKKLSAKATQAKMDLHDLSEELPISWETIMDVAKRAHSAFAELEKKRADLKALEAA >Mature_65_residues SDVEELKAEIKKLSAKATQAKMDLHDLSEELPISWETIMDVAKRAHSAFAELEKKRADLKALEAA
Specific function: Unknown
COG id: COG5420
COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0437 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007774 [H]
Pfam domain/function: PF05082 DUF683 [H]
EC number: NA
Molecular weight: Translated: 7382; Mature: 7250
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVEELKAEIKKLSAKATQAKMDLHDLSEELPISWETIMDVAKRAHSAFAELEKKRADL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KALEAA HHHHCC >Mature Secondary Structure SDVEELKAEIKKLSAKATQAKMDLHDLSEELPISWETIMDVAKRAHSAFAELEKKRADL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KALEAA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1850088 [H]