The gene/protein map for NC_009720 is currently unavailable.
Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 154243973

GI number: 154243973

Start: 16132

End: 17265

Strand: Direct

Name: phnM [H]

Synonym: Xaut_0015

Alternate gene names: 154243973

Gene position: 16132-17265 (Clockwise)

Preceding gene: 154243972

Following gene: 154243975

Centisome position: 0.3

GC content: 72.57

Gene sequence:

>1134_bases
ATGGAAACCGTCTACACCAACGCCCGCCTGATCCTCGACGACGAGGTGATCGACGGCACCCTCACCGTCCGCGACGGCAT
CATCGTCGCCGTGGATGCGGGCCGCGCCCACGCGCCCTCGGCCACGGACTGCGCCGGCGACTTCATCTCCCCCGGCATCG
TCGACCTGCACACCGACGCGCTGGAAGGCCATTTCGTGCCGCGCCCCAAGGTGTTCTGGCCGGATGCGCGGGCCGCCGCG
CTGGCCCATGACGGCCAGACGGTGGCGAGCGGCATCACCACCGTGTTCGACGCCATCTGCGCCGGTGGCTTCGACCAGGC
CAAGGTGGAGCGGCGCGACCTGTTCGAGCTGATGCTGGACGCGGTGGAGGACGGCGCCGGCCTGTTCCGCGCCCACCACC
TCGTCCACCTGCGCTGCGAGATGACGGACCCCGACCTCATGGGATTGGTGGAGCCGGCGCTGGAGCGGTCGACCCTCGCC
TTCGCCTCCCTCATGGATCACACCCCCGGCGCCCGGCAGTGGCGCAACGTGGATGTGCTGCGCGGCTTCCTCCTCGGCAT
CGGCAAGGATGCGGGGGAGGCCGAGCGGGAGATAGCCGAGCGCACCGCGCGGGGCCGCTCCAACGTGGAGCGCAATTTCG
CGCCGCTGGTGGAGATGCTGGCCGCCACTGGCCTCGTGCGCGCCAGCCATGACGACACCACGGACGATCACGTGCGGCTC
GCCCAGGAGGCCGGCTGCACGGTGAGCGAGTTTCCCACCACCCGGGAGGCCGCCGCCGCGGCGCGGGCGGCGGGGCTTGC
CACCATCGGCGGCGCGCCCAACGTGGTGCGCGGCGGCTCCCATTCCGGCGGCGTCGCCATGGGCGTGCTGGCCGGGGAGG
GGCTGGTGGACGCCCTCGCCTCCGACTACGTACCGGCAAGCCTGCTGCAGGCGGCGACGCGGCTGCATCTGGCCGATGGC
CTGCCGCTGCCGCGGGCCATGGCCCTGGTCACCCGCAACCCGGCCCAGATGGCCGGGCTTGCCGATCGCGGCCGGCTCGA
AGCGGGGCTGCGGGCTGACCTGCTGCGCTTCCGCATCGTGGACACGACGCCCGTGGTGCGTCAGGTGTTGGTGGACGGCG
AGCGGGTGTTCTGA

Upstream 100 bases:

>100_bases
CTGAGCCCAAGGGGGCGTTCCGGGGGCGTTCCGGGGGCGTGCCGTCACCGCACCGTCACGGTCCGGTGCAAGGCATGCCC
CTTTCCGGTACAGAGCCCCC

Downstream 100 bases:

>100_bases
GCCGCCGGAGGATTCAGAACAGGGGCGGCACGATACCCACCGGGAAGCCGGCGAGCTTGAGCGTGCCGGTATCGAAGCTG
AGCGCGAAGGTGGTGCCCTT

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA
LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA
FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL
AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG
LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF

Sequences:

>Translated_377_residues
METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA
LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA
FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL
AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG
LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF
>Mature_377_residues
METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA
LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA
FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL
AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG
LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=380, Percent_Identity=41.3157894736842, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 39954; Mature: 39954

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDA
CCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCHHCHHHCCCCEEEEECHH
LEGHFVPRPKVFWPDARAAALAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLD
HCCCCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLAFASLMDHTPGARQWRNVDVL
HHHCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
RGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL
HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH
AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALA
HHHHCCCHHHCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
SDYVPASLLQAATRLHLADGLPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIV
HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCCCHHHHCHHHHHHEEEEE
DTTPVVRQVLVDGERVF
CCCHHHHHHHHCCCCCC
>Mature Secondary Structure
METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDA
CCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCHHCHHHCCCCEEEEECHH
LEGHFVPRPKVFWPDARAAALAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLD
HCCCCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLAFASLMDHTPGARQWRNVDVL
HHHCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
RGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL
HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH
AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALA
HHHHCCCHHHCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
SDYVPASLLQAATRLHLADGLPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIV
HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCCCHHHHCHHHHHHEEEEE
DTTPVVRQVLVDGERVF
CCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]