| Definition | Parvibaculum lavamentivorans DS-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009719 |
| Length | 3,914,745 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 154251554
GI number:
Start: 1206725
End: 1208686
Strand: Reverse
Name: Not Available
Synonym: Plav_1100
Alternate gene names: NA
Gene position: NA
Preceding gene: 154251555
Following gene: 154251553
Centisome position: NA
GC content: NA
Gene sequence:
>1962_bases ATGCACTCCCCCCATCAGGCAAGCGCGACGCCGCTGATCGAACTGCGGAACGTCACCAAGGTCTACCAGACCGGCGAGAC GGAAGTGCGGGCGCTGGACGGCGTGTCGCTGACGCTCCGGCGTGGAGAGTTCGTGGCCATCATGGGGCAATCCGGCTCCG GCAAATCGACGCTGATGAATATTCTCGGCTGCCTCGACCGGCCGAGCGGCGGCAGCTACCGCGTGGCGGGAACGGATGTC GCCGGGCTGACGCCGGACGACCTTGCATCGCTTCGCCGCGACACATTCGGCTTCGTGTTCCAGCGCTACAACCTGCTCAC CACGATGACGGCGGCGGAGAATGTCGAGCTGCCGGCGATCTATGCCGGGGCGACGCGGAGCGAACGCTTCGAGCGTGCCA AGGCGCTGCTGACAAGGCTCGGCATGGGCGACCGCGCGGCACACCGGCCTTCGGAACTTTCGGGCGGACAGCAGCAGCGC GTCTCCATTGCGCGGGCGCTGATGAACGGCGCCGACGTCATTCTCGCGGACGAGCCGACCGGCGCGCTCGACACGCAGAG CGGAGCCGATGTGCTGAGCGTGCTGAAAGAACTGAACGCGGAAGGAAGGACGATCATTCTCATCACGCATGACCCGGCGG TGGCCGAACATGCGGACCGCGTCATCCAGATCAGCGACGGGCACATTGTTTCCGATAGCGGGCCGAAGCCGCGGGCGGGC GCCAGCGCGAACGAAGACGCACCGCTCGGCAGCGGGGCGCAGGTGATACAGGCGGAAATCGCCGAGGCCGTGAAGATGGC GTTCCGCTCTCTGCGCGTGAACATCTTCCGCACGGCGCTGACGCTGCTTGGCGTCGTCATCGGCGTGGCGGCGGTCGTCG TCATGCTTGCCATCGGCGATGGCAGCAAGGCGAACATCATGAGCGCCATGCAGAGCATGGGCACCAACCTGCTGCTGGTG CGGCCGGGGGCACCGGGCATCCGCTCCAGCGGCGACATTGCCACGCTCATTCCGGCGGATGCGGAAGCGATTGCCGAGAC GGTGCCGAACGTGACGGCGGCCATTCCCGAACGCAGCAGCTCGTCGACCGTGCGCTTCGGCAATATCGACTATCGCACCG AGATCAACGGCACCTGGCCGGAGATGACGGTGGTGCGCGATTGGGCGGTGGGCGAAGGCGGGTTTTTCAGCGAGACCGAC CTCAACGGCTATGCGCCGGTGATCGTTCTCGGCGCGACCGTCGTCAACGCGCTCTTCCCGGATGGCGACAGCCCCATCGG CGAATATGTGCTGGTAGGCAACATTCCCTTCGAGGTTGTCGGCGTGATGGAGAGCAAGGGCGCGGCCTCGTTCGGGCGCG ACCAGGACGATGTCGCCTTTGTGCCCATCACCACCGGTTTCATGCGGCTCTTCGGGCAGCAATATGCGAATTCGATTTCG GTGAAGGTTGCGGATGCGGCGCGCATCGACGAGACGGAAGAGGCGATCCGCACGCTGCTGCTGGCGCGGCACCGGACGGA AGACTTCCAGATCCGCAACACGGCGTCGATGCTGGAGACGATGGAGGACATGTCCAACACGATGACAATATTGCTCGGCT CGGTGGCGGCGATCTCGCTGCTTGTGGGCGGCATCGGCGTGATGAACATCATGCTTGTCAGCGTGACGGAGCGGACGCGG GAAATCGGCATAAGAATGGCGACGGGCGCGCGGATGAACAACATTCTCATTCAGTTCAATACGGAGGCGCTGGTCGTTTG CGGCGTCGGCGGGCTGATCGGCGTGTTGCTCGGCATCGGCACGGCGCTGATGCTGAGCGGAGCGGGCATGAACATCGCGA TCAATGCGATGCCGTCGATACTGGCTTTCACCTGCGCATTTTTTACCGGCCTCGTGTTCGGCTATCTGCCGGCGCGGAAG GCGGCGAGGCTCGACCCTGTGGTCGCGCTGGCTTCGGAATGA
Upstream 100 bases:
>100_bases GAAGGCGACACCGTGGTGACGGGAACCGTGGCGGCGGGCGCGGCAGCGAGCGGCGGCAGCGGCGGCCGGCGCCGCGTCGG CTTCTTCTGAGGAGGCCGCC
Downstream 100 bases:
>100_bases GGTTCTTCATGCCAAATCAACTCAGCGCCCCCGCCCGGAAAAATTCAGGGAGAATAGTGCCTGTTGCGCTGGCGCTGATG CTGGGGGCTTGTTCGATGGT
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>653_residues MHSPHQASATPLIELRNVTKVYQTGETEVRALDGVSLTLRRGEFVAIMGQSGSGKSTLMNILGCLDRPSGGSYRVAGTDV AGLTPDDLASLRRDTFGFVFQRYNLLTTMTAAENVELPAIYAGATRSERFERAKALLTRLGMGDRAAHRPSELSGGQQQR VSIARALMNGADVILADEPTGALDTQSGADVLSVLKELNAEGRTIILITHDPAVAEHADRVIQISDGHIVSDSGPKPRAG ASANEDAPLGSGAQVIQAEIAEAVKMAFRSLRVNIFRTALTLLGVVIGVAAVVVMLAIGDGSKANIMSAMQSMGTNLLLV RPGAPGIRSSGDIATLIPADAEAIAETVPNVTAAIPERSSSSTVRFGNIDYRTEINGTWPEMTVVRDWAVGEGGFFSETD LNGYAPVIVLGATVVNALFPDGDSPIGEYVLVGNIPFEVVGVMESKGAASFGRDQDDVAFVPITTGFMRLFGQQYANSIS VKVADAARIDETEEAIRTLLLARHRTEDFQIRNTASMLETMEDMSNTMTILLGSVAAISLLVGGIGVMNIMLVSVTERTR EIGIRMATGARMNNILIQFNTEALVVCGVGGLIGVLLGIGTALMLSGAGMNIAINAMPSILAFTCAFFTGLVFGYLPARK AARLDPVVALASE
Sequences:
NA
Specific function: NA
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA