Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

Click here to switch to the map view.

The map label for this gene is rpsA

Identifier: 154250605

GI number:

Start: 163938

End: 165647

Strand: Reverse

Name: rpsA

Synonym: Plav_0149

Alternate gene names: NA

Gene position: NA

Preceding gene: 154250606

Following gene: 154250604

Centisome position: NA

GC content: NA

Gene sequence:

>1710_bases
TTGGCTAGCACAGCAAGCGCGCTCAATCCGAGCCGCGAAGATTTCGCCGCCCTTCTCGAGCAGTCCTTCATGGACAGCAA
CATGCAGGAAGGCTCCGTCATTAAAGGGACGGTTGTCGGCATCGAAAACGATCTTGCGATCATCGATGTGGGCCTCAAGA
CCGAAGGCCGCATCGCTCTCAAGGAATTCGCAACTCCCGGCAAGCCGGCCGCGCTGAATGTCGGCGACACGGTCGAGGTC
TATCTCGAACGCATCGAAAACGCGATGGGCGAAGCAGTGCTCAGCCGCGAGAAAGCCAAGCGCGAAGAGAGCTGGGTTCG
TCTGGAAGTTGCCTTCGAAAAGCAGGAGCGCGTCGACGGCCAGATATTTGGTCGCGTCAAAGGCGGCTTCACCGTCGATC
TCGACGGCGCCGTCGCCTTCCTTCCTGGCAGCCAGGTCGATATCCGCCCCGTGCGCGATGTGACCCCGCTCATGAACATT
CCGCAGCCCTTCCAGATCCTCAAGATGGACAAGCGTCGCGGTAATATCGTTGTCTCGCGCCGCGCCGTTCTCGAAGAAAC
CCGCGCCGAACAGCGCCAGGAACTCGTCGAGAACCTCAAGGAAGGCCAGGTGCTCGAGGGCGTCGTCAAGAACATCACCG
ATTACGGCGCGTTCGTCGATCTCGGCGGTGTGGACGGCCTGCTCCACGTGACGGATATCGCATGGCGCCGCGTAAACCAT
CCGACGGAAGTTCTCTCGATCGGCCAGACCGTGAAGGTGCAGGTCATCAAGGTGAACCACGAGACGCAGCGCATCTCGCT
CGGCATGAAGCAGCTCGAAGCCGATCCGTGGGAAGGCGTCGAGGCGAAGTATCCGCTTGAGGCGCGTTTCAAGGGTCGCG
TCACAAACATCACCGATTACGGCGCGTTTGTGGAACTCGAACCCGGCGTCGAAGGCCTTGTCCATGTTTCTGAAATGAGC
TGGACGAAGAAGAATGTGCATCCGGGCAAGATCGTTTCCACCTCGCAGGAAGTGGAAGTGATGGTGCTGGAAGTCGATCC
GGTCAAACGGCGTATTTCGCTTGGCCTCAAGCACTGCATGGACAATCCGTGGGCAACTTTCGCGGAACGTTTCCCGGTCG
GCACTGTCGTCGAAGGCGAGATCAAGAACATCACCGAGTTCGGTCTGTTCATCGGCCTCGATGCGGATGTCGACGGCATG
GTGCATATGTCGGATCTCGACTGGAACAGGGCCGGCGAAGAAGCCATGGCCGATTATCAGAAGGGCCAGGTCGTCAAGGC
TCAGGTTCTTGATGTCGACACCGAGAAGGAGCGCATCTCGCTTGGCATCAAGCAGCTCGGCGGCGACCCGATGGAAAGCC
TCGGCGAGCTCCGCAAGGGTGCCGTCGTGACCTGCACCGTCACTGGCGTTACCGACAACGGCCTCGAGGTCTCTGTCGGC
GACGACAACATGACGGCCTTCATCCGCCGCGCCGAGCTCGCGCGTGACCGTGCAGACCAGCGCCCCGAGCGTTTCGCCGT
GGGCGACAAGGTCGACGCCCGCGTGACTCAGTTCGACCGCGCCGGACGCAAGATCCAGCTTTCGATCAAGGCGCTGGAAA
TTGCGGAAGAGAAGGAAGCCGTGGCTCAGTATGGCTCGTCGGATTCAGGCGCGTCGCTTGGCGACATCCTGGGTGCTGCC
CTCAACAAGGCGAGCACCGACGACAAATAA

Upstream 100 bases:

>100_bases
AGCCCAAATCCACTTGCTCCCGAACGCCTCACGATTTCGGGGGAAGACCCACGGATCCAACCGTCGGCCGGAATAAAGCA
TCGTCAGGAGACTTTACACA

Downstream 100 bases:

>100_bases
AGCGGTCCCGGGGGAGCGGCAGCGCCGTTCCCCCGGAATCACTCGTTTGAGAATGTCTCCGCACGGTGAAACTGCTTACA
CTTTTCCTCGTCGCGCTCTA

Product: 30S ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>569_residues
MASTASALNPSREDFAALLEQSFMDSNMQEGSVIKGTVVGIENDLAIIDVGLKTEGRIALKEFATPGKPAALNVGDTVEV
YLERIENAMGEAVLSREKAKREESWVRLEVAFEKQERVDGQIFGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMNI
PQPFQILKMDKRRGNIVVSRRAVLEETRAEQRQELVENLKEGQVLEGVVKNITDYGAFVDLGGVDGLLHVTDIAWRRVNH
PTEVLSIGQTVKVQVIKVNHETQRISLGMKQLEADPWEGVEAKYPLEARFKGRVTNITDYGAFVELEPGVEGLVHVSEMS
WTKKNVHPGKIVSTSQEVEVMVLEVDPVKRRISLGLKHCMDNPWATFAERFPVGTVVEGEIKNITEFGLFIGLDADVDGM
VHMSDLDWNRAGEEAMADYQKGQVVKAQVLDVDTEKERISLGIKQLGGDPMESLGELRKGAVVTCTVTGVTDNGLEVSVG
DDNMTAFIRRAELARDRADQRPERFAVGDKVDARVTQFDRAGRKIQLSIKALEIAEEKEAVAQYGSSDSGASLGDILGAA
LNKASTDDK

Sequences:
NA

Specific function: NA

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA