Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154250468

GI number:

Start: 13995

End: 15233

Strand: Reverse

Name: Not Available

Synonym: Plav_0012

Alternate gene names: NA

Gene position: NA

Preceding gene: 154250469

Following gene: 154250466

Centisome position: NA

GC content: NA

Gene sequence:

>1239_bases
GTGCTCTATCACATCTACGAATTGAACCATGCGGCGGTGGCGCCTTTCCGGGCAGCGGCCGAGGTTGGCCTGTGGGCGCT
GCGGCATCCGCTCAACCCCTTCGCGGAGACGCTGCCGAGCAAGACGCTGGCGGCGGCCTTCGATGTTTTCGAGACGACGA
CGCGGCGTTACGGCAAACCGGAATTCGGACTTCACGAGACGACCATCGACGGCAAGCCGGTTCCGATCACCGAACGGATC
GTGTGGGAGCGGCCTTTCTGCAAGGTGATCCATTTCGAACGCGAGCCATCGGCGATGAAGGGCGTGGCGCCGCAGCAGAA
GCTTTTGATCGTCGCGCCGCTTTCCGGCCATTACGCGACGCTGCTGCGCGGCACGGTGGAAGCGATGCTTCCCTATCACG
AGGTCTACATCACCGATTGGGTGGACGCGCGGAAAGTGCCTTTGACGGAAGGCTCTTTCGATCTCGACGACTATATCGAC
TATGTGATCGAGATGTGCCACGCACTGGGGCCGGACCTGCATCTGCTCGCCGTCTGCCAGCCCTCGGTGCCGGTCTTCGC
GGCTGTCGCCGTGATGCATGACAATGACGACGCCTATGTGCCGCTCAGCATGACGCTGATGGGCGGACCCATCGACACGC
GCGAAAGCCCGACCGAGGTGAACAATCTCGCCACCGAGCGCGGCACCGAATGGTATGAACGCCACGTCATCACCACCGTT
CCCTGGCCGCATCCGGGCGTGATGCGCCGCGTCTATCCGGGCTTCGTGCAGCTTTCGGGCTTCATGGCGATGAACCTCGA
CCGCCACATGGACGCGCATTGGAACTATTTCGACCACATGGTCGAGGGCGATGGCGACTCGGCGGAGAAGCATCGCGAGT
TCTATGACGAATATCTCTCGGTCATGGACATGACCTCGGAGTTCTATCTCCAGACGGTCGACGAGGTGTTCGTGAAACAC
TCGCTGCCCAAGGGCGAGTTCACCCATCGCGGCAAGACGGTGCGGCCCGACGCCATTACCAGAACGGCGCTGATGACTGT
CGAGGGCGAGAAGGACGACATCTCGGGCGTCGGCCAGACGAAGGCGGCGCACAAGCTTTGCAAGAACCTACCGGCCAGCA
TGAAGGCCCATTGGGAGCAGCCGGGCGTCGGACATTACGGCGTCTTCAACGGCACGAGATGGAAGAGCGAGATTGCGCCG
CGCGTACGCGAATTCATGGCCGCCCACGCCAAGAGGTAG

Upstream 100 bases:

>100_bases
CCCGAAAAAATCCGCTTTGACAGGCTGCACTCGAAGCCTACATTAATTGTTGCGCCGCAACATAAGGCGCGGGGGCGGGA
CGGCTGATGCGAGGTGTAGC

Downstream 100 bases:

>100_bases
ATCAGAACTCGCGGGCGAAGATGCGGCTCTCGTCCTGGAACGCCTTGAACTCCAGCGCATTGCCGGAGGGGTCGCGGAAG
AACATGGTTGCCTGTTCGCC

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>412_residues
MLYHIYELNHAAVAPFRAAAEVGLWALRHPLNPFAETLPSKTLAAAFDVFETTTRRYGKPEFGLHETTIDGKPVPITERI
VWERPFCKVIHFEREPSAMKGVAPQQKLLIVAPLSGHYATLLRGTVEAMLPYHEVYITDWVDARKVPLTEGSFDLDDYID
YVIEMCHALGPDLHLLAVCQPSVPVFAAVAVMHDNDDAYVPLSMTLMGGPIDTRESPTEVNNLATERGTEWYERHVITTV
PWPHPGVMRRVYPGFVQLSGFMAMNLDRHMDAHWNYFDHMVEGDGDSAEKHREFYDEYLSVMDMTSEFYLQTVDEVFVKH
SLPKGEFTHRGKTVRPDAITRTALMTVEGEKDDISGVGQTKAAHKLCKNLPASMKAHWEQPGVGHYGVFNGTRWKSEIAP
RVREFMAAHAKR

Sequences:
NA

Specific function: NA

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA