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The map label for this gene is ybgO [H]

Identifier: 153950926

GI number: 153950926

Start: 4629977

End: 4630963

Strand: Reverse

Name: ybgO [H]

Synonym: YpsIP31758_4104

Alternate gene names: 153950926

Gene position: 4630963-4629977 (Counterclockwise)

Preceding gene: 153949285

Following gene: 153946825

Centisome position: 98.04

GC content: 41.34

Gene sequence:

>987_bases
ATGATGCAGACTATTTTAAATAAAATAGGTCGAATCGGTGGCTGTATTGCCCTGTTATTCGTGGCAATGCTGTTATCGCA
AGCTGCCTATGCGCTTGATTGTGTAGAGAAAGGTACTAATGTTGTGAATAAACCCGGCATTCCGATAGGCCAATTAGCAA
TACCGTCTAACATTGCCCCTGGCACAAAAGTCTGGGAATCGAGAGATATTACGGTAACGGCATACTGCGACAATGTTTTA
GGCTCGGTATATGATCAGGTCTGGTTCTATTTTAATCCGCTTGGGCAATCATTAGGGCCAGGGTTACAGTTAGGTGTCAA
CTACTTAGGGCAAGATCTACAAGCCAACGCTGCTCGTTTAAACACCAATACCAGCCCAATCACTAGCGGGCAGAACGTGA
CGGTAACAGTGACTTTCCGTCTGTATATTAAAGTGACTAATGATCTTCCCTCCAGTGGAAATTATATCGGCACGGATAGC
TTTACGGTATTCCAATTGGATGGCTCTGGTGGTATTAACGTTACTGCGGGTGCCAAAAATTTGAAATATACCTTGTCTGG
TTTAAGCATTGTACGTTTTATTCCCTGTGGTGCGGATTTAGTGATTTCTCCGGCGTCACAAGTTGTGAATTTTGGTTCAT
TTAATCAAGCCCGGTTACTGTCTAGTAATAATAATCTCAGTCAGCCTTTTTCTATTACTGCGATAAAACAAGGTTGCTTG
GCTAATTTTTCCATTCAGGCACAGTTTTTAACCGCTAACCCATTAGTGGGTGACAATGCGATTGATCTGCAAAACGGCAT
TAAACTGACCATTTATGATGATAAAAATCAGGCAATTGTATACAACCGTTATGCTGATTTTGCACAATTGAATAATATTA
CTCAGGTGACAAGAAATTATACTGCCCGCCTAAATGCCATTGAAGGACAACCGATAAAGCTGGGCCAGTTTGACGCAACG
GCAATCATTAAGATTAATTATTATTAG

Upstream 100 bases:

>100_bases
TACGCACTTTTAACTGTTTATCAGCAGAATGCCAAATTCAGCCAGCTGAAAAGAGAAGGTGATACACGTACCCGGTTCAG
CATATGAATAAGGAATAACA

Downstream 100 bases:

>100_bases
TGTGTGAGCCGTGGCCCTATAAAAATGTGCTGAGTAATAATGAATTACCCAGCACGGTGTTTATTCGCACTCTTGACAAC
TACTCACACAATGGCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MMQTILNKIGRIGGCIALLFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKVWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTAGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSQPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY

Sequences:

>Translated_328_residues
MMQTILNKIGRIGGCIALLFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKVWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTAGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSQPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY
>Mature_328_residues
MMQTILNKIGRIGGCIALLFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKVWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTAGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSQPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY

Specific function: May be involved in a fimbrial system chaperoned by ybgP and exported by ybgQ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqiI [H]

Homologues:

Organism=Escherichia coli, GI87081777, Length=337, Percent_Identity=31.4540059347181, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1789427, Length=352, Percent_Identity=25, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35359; Mature: 35359

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQTILNKIGRIGGCIALLFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GTKVWESRDITVTAYCDNVLGSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARL
CCCCCCCCCEEEEEEHHHHHHHHHHHHHEEECHHHHHHCCCHHHHHHHCCCCCCCCCEEE
NTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDSFTVFQLDGSGGINVTAGAKN
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEEECCCC
LKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSQPFSITAIKQGCL
EEEEECCEEEEEEECCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNY
ECEEEEEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHH
TARLNAIEGQPIKLGQFDATAIIKINYY
EEEEEECCCCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MMQTILNKIGRIGGCIALLFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GTKVWESRDITVTAYCDNVLGSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARL
CCCCCCCCCEEEEEEHHHHHHHHHHHHHEEECHHHHHHCCCHHHHHHHCCCCCCCCCEEE
NTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDSFTVFQLDGSGGINVTAGAKN
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEEECCCC
LKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSQPFSITAIKQGCL
EEEEECCEEEEEEECCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNY
ECEEEEEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHH
TARLNAIEGQPIKLGQFDATAIIKINYY
EEEEEECCCCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]