| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950902
Identifier: 153950902
GI number: 153950902
Start: 181605
End: 182069
Strand: Reverse
Name: 153950902
Synonym: YpsIP31758_0160
Alternate gene names: NA
Gene position: 182069-181605 (Counterclockwise)
Preceding gene: 153950175
Following gene: 153949333
Centisome position: 3.85
GC content: 33.55
Gene sequence:
>465_bases ATGAAAGCAAAAAGTAAAAAGACTCTCTGTGCGCTATTACTGATTAGCAGCATTTTTCTAGGTTATTTCTTTTGGGTGTC ACGGCATCCGGTGGAAATTATCTCCGTTCATCAGAGAAATAATTACAGTGATGTTTTAGTGAGAAATTTCCCTTTCACTG AGAAAGGGAAAATAAACTGGTGGCTAGAAAACAGGGATATACTGAAAGCCAAATACAGTATTCCAAAACCTGCATCAGAT GGTTTTTACACTATCATATTTTGGGATTTTGGTGACGGTTATAAAGAGGAAGGAAAGTACGACAGGCTGTGTTTTAGCGA TATGAATACGACCCAAAATTGTATCGAGAAAGAAAAATATATGACTATTTACAAGATAAAAAATGATGAAATATTTTTCT CCTTCGATGGAAATAGATATTTTTTAAACGAAAACAATAAAATCGTTAAAATGAAACGCGAATGA
Upstream 100 bases:
>100_bases TTCTTCCGCATATGGTTTGTCCTCCAACGATTCAACCAGTTTGGTTTCAAGCCATTTATGACCAATATGGAAGCCACAAT AGAGATTACCGGGGGCCGTA
Downstream 100 bases:
>100_bases AATTTCGCCTCTTATGTAGTTTAGCCTCAAGCATTTATGACCAATATGGAAGCCACAATTGAGATTACCGGGGGCCGTAA TGAAAGCAAAAAGTAAAAAG
Product: entero membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKAKSKKTLCALLLISSIFLGYFFWVSRHPVEIISVHQRNNYSDVLVRNFPFTEKGKINWWLENRDILKAKYSIPKPASD GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTQNCIEKEKYMTIYKIKNDEIFFSFDGNRYFLNENNKIVKMKRE
Sequences:
>Translated_154_residues MKAKSKKTLCALLLISSIFLGYFFWVSRHPVEIISVHQRNNYSDVLVRNFPFTEKGKINWWLENRDILKAKYSIPKPASD GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTQNCIEKEKYMTIYKIKNDEIFFSFDGNRYFLNENNKIVKMKRE >Mature_154_residues MKAKSKKTLCALLLISSIFLGYFFWVSRHPVEIISVHQRNNYSDVLVRNFPFTEKGKINWWLENRDILKAKYSIPKPASD GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTQNCIEKEKYMTIYKIKNDEIFFSFDGNRYFLNENNKIVKMKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18466; Mature: 18466
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKSKKTLCALLLISSIFLGYFFWVSRHPVEIISVHQRNNYSDVLVRNFPFTEKGKINW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDILKAKYSIPKPASDGFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTQNCIEKEKY EECCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHE MTIYKIKNDEIFFSFDGNRYFLNENNKIVKMKRE EEEEEEECCEEEEEECCCEEEECCCCEEEEEECC >Mature Secondary Structure MKAKSKKTLCALLLISSIFLGYFFWVSRHPVEIISVHQRNNYSDVLVRNFPFTEKGKINW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDILKAKYSIPKPASDGFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTQNCIEKEKY EECCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHE MTIYKIKNDEIFFSFDGNRYFLNENNKIVKMKRE EEEEEEECCEEEEEECCCEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA