| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950885
Identifier: 153950885
GI number: 153950885
Start: 1052369
End: 1053472
Strand: Direct
Name: 153950885
Synonym: YpsIP31758_0869
Alternate gene names: NA
Gene position: 1052369-1053472 (Clockwise)
Preceding gene: 153947097
Following gene: 153950313
Centisome position: 22.28
GC content: 43.21
Gene sequence:
>1104_bases ATGTCATCATTTAAAACCCTGGGATTTTTCTTCCTTTCACTGTCATTACTCTTCTCTTCTTTATTAGTGCTCTTATCTCT GCTGCTATTCGCTGGTTTATTACTGTTCCCCAGTCTCTTACCGTTCTCCCGTTTCTTGCCATTCGCTGGATTCTCTCCAG CCAGCGGATTTTCGCTAGCGACAAAATATGATGAGGGATTTTCGGGTAATGTGGGCTATAGGGGGGATCTCAATGACAGC CCGAAAACTGACCCACTGTGGATTCCATTACCTGCGTTACCACTTATTCAACAGGCTGTTACTGAATTAGTGCCAACGGT GCAGGGGCAGTACCAAGAGCGTGTCATGAGCCAAGTGTGTGCATTAGCCCGAGGTGAGCGTACTCAGGAACAGGTTGCTC AAACACTGCGGTCATACGATATCGATATCAGCAATATTCCCCCTCAGGGACATCCTCTTTCTCTGTTGGTCAGTACCGAC CAATCCAGTCGTGTCATCGGCTGTGCTGCTTATATTGCCAGTTCTGTCATGGCTATCCCTAAGTCGGATGAGTTTATGGT GAGTACTGATAAACCCGCGGATGCCTTACCAGGGAAAAAAAATGAAGCGGCAAGCAAAGAGAAAACATTGAGTATTGATC CTAAAAAATTAGCTCAATACCTTCAGACTCAATTGGCTGTAGCGAAGGCTAATGCTGATATTTTTGCAATTATTGCCGTT GAGTTAGAAAAAAAACCAGGGCTCACTGTGAATGAATATTCGGTACAAATAAAAAAAGTATTTAGTGAAGTTGCTTCGGC CTATTTACAACGGGTCAAAGCTCTTTATGCCGTGGGGGCTGGGGTTAATTATAAATTAATTACTTACTCTGATGAGGGTT TTAAGTTCATTAGCAATGATGGTTACTTGTTTGAGTATGGGTACGACAGCTTAAGTTTGTATTTCAACAGAATTCCTTGG TATGGCAGCGGAAAAATATTGGGGAAAGAGTATTTTTTCTCTGTTTCGTATATTGAACCGAATCTTGTAAAACGCATAAG AGAGGAGAAGCGTGAAGAGAAGAGTGAAGGGGTTCTCAATCAAGAGAGCGGTGTTGCTCCCTGA
Upstream 100 bases:
>100_bases GCGCGTTACGCCAACGCTGAATGCTATTCAGGCTGTCACTAACGGGTTGTAGGGTGTTTTGTACAACCCGATTCTTGCTC TTGGGCATCAAAGGATCGCC
Downstream 100 bases:
>100_bases ATGCTGATTTGCTGGCAGCCATCAAAACGGGCTAGTTACTTTTTATTGTTAGGGAGTAGAAACCTCTGGCAGACTTTTTT AGCGTACAGGTGTACACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDS PKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTD QSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPW YGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP
Sequences:
>Translated_367_residues MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDS PKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTD QSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPW YGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP >Mature_366_residues SSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDSP KTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQ SSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAVE LEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPWY GSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40470; Mature: 40339
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEE TKYDEGFSGNVGYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVC EECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC KSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV CCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEE ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISND EECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC GYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLN CEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCC QESGVAP CCCCCCC >Mature Secondary Structure SSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEE TKYDEGFSGNVGYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVC EECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC KSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV CCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEE ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISND EECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC GYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLN CEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCC QESGVAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA